3NZQ


Conserved Protein Domain Family
speA

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TIGR01273: speA 
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arginine decarboxylase, biosynthetic
Two alternative pathways can convert arginine to putrescine. One is decarboxylation by this enzyme followed by removal of the urea moeity by agmatinase. In the other, the ureohydrolase (arginase) acts first, followed by ornithine decarboxylase. This pathway leads to spermidine biosynthesis, hence the gene symbol speA. A distinct biodegradative form is also pyridoxal phosphate-dependent but is not similar in sequence. [Central intermediary metabolism, Polyamine biosynthesis]
Statistics
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PSSM-Id: 273532
Aligned: 10 rows
Threshold Bit Score: 856.64
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3NZQ_A        30 QEASKMLRTYNIAWWGNNYYDVNELGHISVCPdPDVPE--ARVDLAQLVKTR---EAQG--QRLPALFCFPQILQHRLRS 102 Escherichia col...
Q9SI64        34 WSPSLSSSLYRIDGWGAPYFAANSSGNISVRPhGSNTLphQDIDLMKVVKKVtdpSGLG--LQLPLIVRFPDVLKNRLEC 111 thale cress
P22220         1 -MAKNYGDVYHVEGWGEPYFAVNKDGHLCVRIyGRETLpgQEIDVLSVIEQAtsaDGTGkkLQFPMILRFPDVLRHRINS 79  oat
P21170        30 QEASKMLRTYNIAWWGNNYYDVNELGHISVCPdPDVPE--ARVDLAQLVKTR---EAQG--QRLPALFCFPQILQHRLRS 102 Escherichia col...
WP_001882632  30 SKLDRVRADYNVHYWSQGFFGIDDQGEVYVSPrKDK-A--HQTQLSSIVKQL---EARD--LNLPVLVRFPQILHQRVHN 101 Vibrio cholerae
WP_010943173   4 WSINESAKIYNLPNWGADLFSINKKGNVCVHP-SPTSK--HSIDLRALVDDL---IKRK--IKPPILLRFMDVLQGRIAS 75  Geobacter sulfu...
WP_010892689   3 WSQDLAHKTYSILHWADGYFEVNDAGQMVVMPvGRD-G--VRISLPEVVDAA---RAAG--AKLPLLLRFPDILGHRLGK 74  Xylella fastidiosa
WP_003095365  14 WTVADSRGVYGIRHWGAGYFAINDGGNVEVRPqGADS---TPIDLYELVGQL---REAG--LSLPLLVRFPDILQDRVRK 85  Pseudomonas
WP_011712402  24 WTIEESMELYRTQGWGLGYVHVDAEGDLTITPgSQPHI--ESISLPKLVDDV---EAMG--FQGPMLIRFGGILQDRITR 96  Magnetococcus m...
EMH37015       4 gkkMQEVHDYGINFWSNNEFKIEK-GLVKVCHg-------KNPSLLEIVQSV---RDKG--YRGPLLVRFPHLVQKQIKS 70  Helicobacter py...
3NZQ_A       103 INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSg-----EPLGLEAGSKAELMAVLAHAGM--TRSVIVCNGYK 175 Escherichia col...
Q9SI64       112 LQSAFDYAIQSQGYDSHYQGVYPVKCNQDRFIIEDIVEFgs---gFRFGLEAGSKPEILLAMSCLCKgnPEAFLVCNGFK 188 thale cress
P22220        80 LHTAFANAIKYTQYGSVYQGVFPVKVNQHKDVVQDMVHFgy---dHSYGLEAGSKPELLIAMSCLTKakPGAYLVCNGYK 156 oat
P21170       103 INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSg-----EPLGLEAGSKAELMAVLAHAGM--TRSVIVCNGYK 175 Escherichia col...
WP_001882632 102 ICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASqaelehKQLGLEAGSKPELLAVLAMAQQ--ASSVIVCNGYK 179 Vibrio cholerae
WP_010943173  76 INRVFKNAIDENDYPATYQTFYPIKVNQQRQVVEAIAKFgk---rYNIGLEVGSKPELVIGISFATG--NGIPIICNGYK 150 Geobacter sulfu...
WP_010892689  75 LQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHq----gDGFGLEAGSKPELMAVLALS-R--PGGLIVCNGYK 147 Xylella fastidiosa
WP_003095365  86 LTGAFDANIERLEYQSRYTALYPIKVNQQEAVVENIIATe----nVSIGLEAGSKPELMAVLALAPK---GGTIVCNGYK 158 Pseudomonas
WP_011712402  97 LNRAFTESRSRLNYAGHYQGVYPVKVNQDRHVVSEVVASg-----TPMGLEVGSKPELVLAMAYMDR--TP-LIICNGYK 168 Magnetococcus m...
EMH37015      71 LFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGak---gLNYGLEAGSKSELIIAMSYTN---PTAPITVNGFK 144 Helicobacter py...
3NZQ_A       176 DREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAER--LNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQL 253 Escherichia col...
Q9SI64       189 DSEYISLALFGRKLELNTVIVLEQEEELDLVIDLSQK--MNVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTVQILRV 266 thale cress
P22220       157 DSAYVALALAARAMGLNVIIVLEMEEELDIVIEESSK--LGVEPVIGVRAKLLTKIPGHFGSTAGKHGKFGLPAEKIYEV 234 oat
P21170       176 DREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAER--LNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQL 253 Escherichia col...
WP_001882632 180 DREYIRLALIGEKLGHKVFIVLEKLSELDLVLKEAKS--LGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTV 257 Vibrio cholerae
WP_010943173 151 DTEYIETVLYATKIGYDITIVVEKMFELEKIIALSKK--TGIKPKLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIIAA 228 Geobacter sulfu...
WP_010892689 148 DREYIRLALIGRKLGLKTFIVIEKPSELRMVLEEAKT--LGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDV 225 Xylella fastidiosa
WP_003095365 159 DREFIKLALMGQKLGHNVFIVIEKESEVQLVIEEAAN--VGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSAAQLLSV 236 Pseudomonas
WP_011712402 169 DRDYIELALRATGLGFPIFVVVDRLEELAPIIDLAKS--LNVSPNLGLRARLLTEGVGKWSESAGGFSKFGLTAGEILLA 246 Magnetococcus m...
EMH37015     145 DKEMIELGFIAKSMQHEITLTIEGLNELKTIIAVAKQndFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEA 224 Helicobacter py...
3NZQ_A       254 VETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHK-LGvN-IQCFDVGGGLGVDYEGT-RSQSDCSVNY 330 Escherichia col...
Q9SI64       267 VRKLSQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVR-LG-AhMKVIDIGGGLGIDYDGSkSGESDLSVAY 344 thale cress
P22220       235 AKKLKALNKLHWLKLLHFHVGSMIPTTDIVFKAASEASDIYCALVKeYGvEtMTTLDCGGGLGVDYDGTrSGSSDMSVAY 314 oat
P21170       254 VETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHK-LGvN-IQCFDVGGGLGVDYEGT-RSQSDCSVNY 330 Escherichia col...
WP_001882632 258 INRLKAENQLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRE-LGaH-IDFFDVGGGLAVDYDGT-RSQSSNSMNY 334 Vibrio cholerae
WP_010943173 229 IGLLEQNDLLDRVKLLHFHIGSQITKIDKIKSALIEGTRIYAEMRK-LGvG-IRYVDIGGGLGVDYDGS-KSSYFSSVNY 305 Geobacter sulfu...
WP_010892689 226 WKVLRGTEYADCLNVMHFHMGSQISNVRDIAKGMREATRYFVELSR-LGaK-ITHVDVGGGLGIDYEGT-RSRSDCSINY 302 Xylella fastidiosa
WP_003095365 237 VERFRQAGLDQGVRLLHFHMGSQIANLADYQHGFKEAIRYYGELRA-LGlP-VDHIDVGGGLGVDYDGT-HSRNASSINY 313 Pseudomonas
WP_011712402 247 VNQLEREGLKESLKLLHMHQGSQISLLDVVRQSAQEIVRFYLELRK-MGcP-IEYVDVGGGLGVDYEGL-SSSAPCSVNY 323 Magnetococcus m...
EMH37015     225 MRLLEENDLLEHFHMIHFHIGSQISDISPLKKALREAGNLYAELRK-MGaKnLNSVNIGGGLAVEY--T-QHKHHQDKNY 300 Helicobacter py...
3NZQ_A       331 GLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEY-TV-P-TAPA--E-DA---PRAL--- 398 Escherichia col...
Q9SI64       345 SLEEYAAAVVASVRFVCDQKSVKHPVICSESGRAIVSHHSVLIFEAVSAGQQHE-TPtD-HQFM--LeGY---SEEV--- 414 thale cress
P22220       315 GLEEYASSIVQAVRLKCDYHGVPHPVLCTESGRAMASYHSMIILEALSAIPEPK-D--D-EDe-----AT---TEQL--- 379 oat
P21170       331 GLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEY-TV-P-TAPA--E-DA---PRAL--- 398 Escherichia col...
WP_001882632 335 GLHEYARNIVSTVSDVCNLYGQPRPVIISESGRSITAHHAVLITNVIGTEAYSP-EE-I-PAPG--A-DA---PMLLknm 405 Vibrio cholerae
WP_010943173 306 SIEEYANDVIYQIKNICEDAGVECPNIISESGRATAAHYSVLVTNLLNTNTSNA-MP-DfEETL--N-GTeklAPTV--- 377 Geobacter sulfu...
WP_010892689 303 GLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPE-GR-V-PGVC--D-DE---PAVV--- 370 Xylella fastidiosa
WP_003095365 314 DIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTAHHAVLITQVTDVERHN--DD-V-PKIVdlD-EQ---PEIV--- 382 Pseudomonas
WP_011712402 324 SLGQYADALLGVFAERCREAGAPEPNVVTESGRALTAPHAVLVVEVMGWSEPVGrDP-A-PETI--P-EQ---APEV--- 392 Magnetococcus m...
EMH37015     301 TLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY-NEkS-LKIK--EnNN---PPLI--- 370 Helicobacter py...
3NZQ_A       399 -QsmweTWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGIFSLQERAWAEQLYLSMCHEVQkqldpqnrahrpiidel 477 Escherichia col...
Q9SI64       415 -Rg---DYENLYGAAMRGDRESCLLYVDQLKQRCVEGFKEGSLGIEQLAGVDGLCEWVIKAIG----------------- 473 thale cress
P22220       380 -Hg---RIRDLS-SKLQPTGLSMSSHAVHIKKHGIEMYKLG----KKLS------KSVTT-------------------- 424 oat
P21170       399 -QsmweTWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGIFSLQERAWAEQLYLSMCHEVQkqldpqnrahrpiidel 477 Escherichia col...
WP_001882632 406 wR----GFEEVQHGTDDRALIEIYNDTQSDLSEAHSQFATGVLNLEHRAWAEQLSLRIYHELRqkmsnknrfhrpildel 481 Vibrio cholerae
WP_010943173 378 -K----KLVDIYKSIDRYSLREDYHDTVQLIQEAVSLFNLGYLTLNERAMAEWLHGKILRKINgivekikp-ipeelqnf 451 Geobacter sulfu...
WP_010892689 371 -R----HMREIYGELDARPAIELFYEAQHFHAEGLAAYTLGQIDLVHRARIDDLFYAISHGVRerlsheekshrpvldel 445 Xylella fastidiosa
WP_003095365 383 -R----WLAELLGPTDAEMVTETYWRATHYIGDAAAQYADGKISLAQKALAEQCYFAICRRLHnqlkarqrshrqvldel 457 Pseudomonas
WP_011712402 393 -Q----TLHTLAMEFDKERADLIWEQALMLFESIKQGFVLGRLDLTARSIAERVMVHLGRLVHeakgqdp----kpesrl 463 Magnetococcus m...
EMH37015     371 -D----EMLDLLANINEKNAIEYLHDSFDHTESLFTLFDLGYIDLIDRSNTEVLAHLIVKKAVqllyvkd---hndilri 442 Helicobacter py...
3NZQ_A       478 QERMADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDgdGiATTMPMPEYDP--- 554 Escherichia col...
Q9SI64       474 ASDPVLTYHVNLSVFTSIPDFWGIDQLFPIVPIHKLDQRPAARGILSDLTCDSDGKINKFIG--G-ESSLPLHEMDNngc 550 thale cress
P22220       425 DAHTIYNYHMNLSVFSLMPDYWGIQHLFPMMPVSRLDEKPTHKATLVDVTCDSDGKVDKFIR--D-TETMPLHPLDP--- 498 oat
P21170       478 QERMADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDgdGiATTMPMPEYDP--- 554 Escherichia col...
WP_001882632 482 QERLADKFFVNFSLFQSLPDAWGIDQVFPVLPLSGLEEMNDRRAVMLDITCDSDGAVEQYVEgqGiESTLPVPAWTS--- 558 Vibrio cholerae
WP_010943173 452 QLSLRQTYFANFSLFQSIPDSWAIDQLFPIVPIQRLNQKPDVMASIADITCDSDGEITSFVGenGrTKYLPLHKMRK--- 528 Geobacter sulfu...
WP_010892689 446 NERLVDKYFVNFSVFESIPDVWAINQIFPIVPIERLNEAPTRRGVVCDLTCDSDGTVKQYVEneSlDSALPLHVLRH--- 522 Xylella fastidiosa
WP_003095365 458 NDKLADKYICNFSVFQSLPDTWAIGQVLPILPLHRLGEEPDRRAVLQDLTCDSDGKITQYVDeqSiETSLPVHEVKE--- 534 Pseudomonas
WP_011712402 464 QGYVSERYLTNFSMFQSLPDAWAIGQLFPIMPLQRLHEEPAAEAILQDLTCDSDGQVKRFIGvqGeNATLPVHHPGP--- 540 Magnetococcus m...
EMH37015     443 QEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDEKPTRSASLWDITCDSDGEIAf-----DsTKPLFLHDIDI--- 514 Helicobacter py...
3NZQ_A       555 E-NP-PMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDG-SVEVELSDEGDTVADMLQYVQLDPKTLLTQFRDQ---- 627 Escherichia col...
Q9SI64       551 S-GGrYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPhGFAVTRAVMGQSSADVLRAMQHEPELMFQTLKHRaeep 629 thale cress
P22220       499 K-LGgYYVAVLLTGAYQEALSNKHNLFGGPSLVRVVGTGNGgAFNVEAALLGSTTEELIGTVSYD---VKQDISSVieer 574 oat
P21170       555 E-NP-PMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDG-SVEVELSDEGDTVADMLQYVQLDPKTLLTQFRDQ---- 627 Escherichia col...
WP_001882632 559 D-KP-YLMGFFLVGAYQEILGDMHNLFGDTHSAVVNINDNG-ESEIAFINEGDTVEDMMRYVHIDVDKIRTNYRQL---- 631 Vibrio cholerae
WP_010943173 529 D-ED-YFVGFFLIGAYQEILGDMHNLFGDTNAVHVTFNKKT-GYKIDTVIHGDATWESLKYVQYKGPEILKHVRDTlekd 605 Geobacter sulfu...
WP_010892689 523 G-EA-YRIGFFLVGAYQEILGDIHNLFGDTDAVEVAVDGRG--YRIAQQRCGDTTDVMLDYVGYALDEVRRVYAQR---- 594 Xylella fastidiosa
WP_003095365 535 G-ED-YLIGVFLVGAYQEILGDMHNLFGDTDSVNVYQRADG-GIYHAGIETHDTIEDMLRYVHLSPEELMTLYRDK---- 607 Pseudomonas
WP_011712402 541 T-ER-YRLGFFLVGAYQEILGDYHNLFGDTHVVEVGLKADG-SMAKPVVRRGQRSVDVLKAVSYEPSELYDAVGRL---- 613 Magnetococcus m...
EMH37015     515 DeEE-YFLAFFLVGAYQEVLGMKHNLFTHPTEFSVVFDEKG-DYEVEDICEAQTILDVLDDLDYDTKEIERLLKQK---- 588 Helicobacter py...
3NZQ_A       628 VK-KTD----LDAELQQQFLEEFEAGLYGYTYLE 656 Escherichia coli K-12
Q9SI64       630 RN-NNNkacgDKGNDKLVVASCLAKSFNNMPYLS 662 thale cress
P22220       575 AR-ENK--------VWEMVEKLVESGLHTMPYLA 599 oat
P21170       628 VK-KTD----LDAELQQQFLEEFEAGLYGYTYLE 656 Escherichia coli K-12
WP_001882632 632 VS-QR-----VAKEEQETVLAELELGLSGYTYLE 659 Vibrio cholerae
WP_010943173 606 VA-LRK----VTIEESSHFLELLDRTLLGYTYLG 634 Geobacter sulfurreducens
WP_010892689 595 IT-AAG----MSAAESKALSDMLEAGLTGYPYLS 623 Xylella fastidiosa
WP_003095365 608 VA-GAK----LTARERNQYLDALRLGLTRSAYLS 636 Pseudomonas
WP_011712402 614 -A-RGA----CKDDRAAQFIEAYARLVKGCPYLT 641 Magnetococcus marinus
EMH37015     589 IEdNNQ----LDMEEKKEIMGRLYVMLSENGYLR 618 Helicobacter pylori GAM71Ai
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