Conserved Protein Domain Family
oadG_fam

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TIGR01195: oadG_fam 
sodium pump decarboxylases, gamma subunit
This model finds the subfamily of distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit. Most sequences scoring between the noise and trusted cutoffs are eukaryotic sodium channel proteins.
Statistics
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PSSM-Id: 273493
Aligned: 9 rows
Threshold Bit Score: 38.5752
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAC69171       4 NPWLImMINMTIVFGVLIVLGILMVLIHAVDPTKKVQGKKkpvVAKPAPSAAaskrqeeekvaamAAVLAlVQDEDd-MI 82  Acidaminococcus...
P13155         4 NAVLLgEGFTLMCLGMGFVLVFLLLLIFAIRGMSLAVNRL---FPEPPAAPKpa----------pAAVAP-ADDFA--RL 67  Klebsiella pneu...
O83094         4 IRLFA-QSALVSVMGMGMVFAFLLLLICVVRCVGALVSSFg--WDRGPDEGVg------------AAVPA----GG--AL 62  Treponema palli...
CAA05138      22 gdlMTgIGVTV-VLGMGITVVALIFLMYIIGGMAAIMAEK---PKEVKETAAaapk------peaAAAPApAANNDe-EL 90  Propionigenium ...
WP_014164043  50 TSLFL-EGINLLTLGMGFVFIFLIFLVYATRAMSQLIVRFa--PPEVPAKTTnkka-----sankAKANP-NQNQG--EL 118 Vibrio cholerae
WP_010868009   1 mgaiL-EGFYLTILGVAIVFLVLSILAVVMYGIGEFERRSk--REVETKEVKeer-------eeeEKVET-LEKEEd-ER 68  Pyrococcus abyssi
WP_001906611  36 GSLLL-DAATLMVTGMAVVFLFLTLLVYLVQFMSRVIPQE---VPEAAATPKks-----------qkVQP-VTDSVspQV 99  Vibrio cholerae
WP_010885372   1 mgaLL-EGLYITILGVTIVFIVLSILAAVMYGIGEFERRTv--Gkek---------------kpeEVKEV-EKTEDy-EK 60  Pyrococcus hori...
WP_010879578   1 ---MIdLAIMLTVEGMGVVFLVLSILALFMWLMGKVAGSAn--KEKIEISSD-------------------STGFSe-KE 55  Archaeoglobus f...
AAC69171      83 AAALSAAIAEHKRKME 98  Acidaminococcus fermentans DSM 20731
P13155        68 KPAIVAAIHHHRRLHP 83  Klebsiella pneumoniae
O83094        63 AAAIAVAVHEKARSTS 78  Treponema pallidum subsp. pallidum str. Nichols
CAA05138      91 VAVIAAAVAAQLGTSA 106 Propionigenium modestum
WP_014164043 119 LAVLTAAVHHHKTQQK 134 Vibrio cholerae
WP_010868009  69 VAVITAAILAYLSQRV 84  Pyrococcus abyssi
WP_001906611 100 VAAIAAAVHQHRSATA 115 Vibrio cholerae
WP_010885372  61 VAVITAAILTYLSKRT 76  Pyrococcus horikoshii
WP_010879578  56 IFAIVAALSRHEGLQV 71  Archaeoglobus fulgidus
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