1D1R


Conserved Protein Domain Family
SUI1_rel
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TIGR01158: SUI1_rel 
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translation initation factor SUI1, putative, prokaryotic
This family of archaeal and bacterial proteins is homologous to the eukaryotic translation intiation factor SUI1 involved in directing the ribosome to the proper start site of translation by functioning in concert with eIF-2 and the initiator tRNA-Met. [Protein synthesis, Translation factors]
Links
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Statistics
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PSSM-Id: 273471
Aligned: 13 rows
Threshold Bit Score: 112.061
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1D1R_A         8 LVYSTETGRIDEP--KAAPVRp----------kGDGVVRIQRQTSgRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGG 75  Escherichia coli
Q57902         3 PEICPRCGLPKELcvCEEIAK------------EEQKIKIYVTKR-RFGKLMTIIEGFDTSVIDLKELAKKLKDICACGG 69  Methanocaldococ...
O29348         2 SEICPVCGLPKDLcvCEEVAK------------EQQFIVIKTGKR-RYGKEVTIIEGIDKGEINLEELAKYLKSKLACGG 68  Archaeoglobus f...
Q9YBG9         2 MDESLCGGLPPEI--CEQLSV------------EEQIIKIRLEKR-RFGREVTIIEGINEKEFNLKKLASTLKSRLATGG 66  Aeropyrum perni...
P08245         8 LVYSTETGRIDEP--KAAPVrp----------kGDGVVRIQRQTSgRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGG 75  Escherichia col...
P45116         6 LVYSTDVGRIKEE--KASVVrp----------kGDGVVRIQKQTSgRKGAGVSVITGLDLSDEELKKLAAELKKRCGCGG 73  Haemophilus inf...
AAG08225      14 LVYSTDGGRHCPD--CQQPKDacicgq-avapvGDGIARVRRETKgRGGKTVTTISGLSLAGDALKELASALKRRCGTGG 90  Pseudomonas aer...
Q55397        10 IVYQEFGPVADPL--SEEQIDlp---------pQQQNVRIQATRSgRKGKTVTVVSGLQLSAMGQQALLKALKSFCGSGG 78  Synechocystis s...
O26118         1 MKICDVCGLPEELcvCEEIAR------------EVQTLKVYTVRR-RFGKVMTIIEGIDEHDIDIKELTKILKARCACGG 67  Methanothermoba...
WP_011713818  11 VVYSTEQGRLCPQ--CHQTVAacccrqarspvtSDGVVRVSRETKgRKGRGVTLIKGLPLSAEALMTQAKHLKTLCGSGG 88  Magnetococcus m...
WP_011929322  26 LVYSTEVGRIKPE--HEKIERp----------kGDGIVRIFRETKgRKGKGVTIVKGLDLDDAALKLLAAELKKKCGCGG 93  Vibrio cholerae
WP_010867456   1 MVPRIVNPLDEML--FKEVLK------------EQQRIRVYTERA-RYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGG 65  Pyrococcus abyssi
WP_010903930   2 SEVCSTCGLPEELcvCEDVAK------------ESQQIEIRIDER-RYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGG 68  Halobacterium s...

1D1R_A        76 AVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG 108 Escherichia coli
Q57902        70 TVKDNTIELQGDHRKKVAEELVKMGFSRDSIEI 102 Methanocaldococcus jannaschii DSM 2661
O29348        69 TVKNGVIELQGNHVNRVKELLIKKGFNPERIKT 101 Archaeoglobus fulgidus DSM 4304
Q9YBG9        67 TAKNGRIELQGDHRHRVKKILVELGFPEENITI 99  Aeropyrum pernix K1
P08245        76 AVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG 108 Escherichia coli K-12
P45116        74 AVKNGIIEIQGEKRDLLKQLLEQKGFKVKLSGG 106 Haemophilus influenzae Rd KW20
AAG08225      91 SLKDGVVEIQGEHVELLIDELLKRGFKAKKSGG 123 Pseudomonas aeruginosa PAO1
Q55397        79 TLKEDCVEIQGDQREKILAYLLKQGYKAKISGG 111 Synechocystis sp. PCC 6803 substr. Kazusa
O26118        68 TAKKGQIELQGDHKKKVKEVLADMGFSSDTIEI 100 Methanothermobacter thermautotrophicus str. Delta H
WP_011713818  89 TVKDGVVEIQGDHVEQIMDLLKKQNYTVKRAGG 121 Magnetococcus marinus
WP_011929322  94 AVKDGDIEIQGDVRDQLKTLLESKGHKVKLAGG 126 Vibrio cholerae
WP_010867456  66 TAKNGRIELQGDHRDRIKKLLAELGFSEDLIEV 98  Pyrococcus abyssi
WP_010903930  69 TVEDGEIELQGNHSGRVEDFLRNKGFNVA---- 97  Halobacterium salinarum
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