2RCR,2PRC


Conserved Protein Domain Family
puhA

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TIGR01150: puhA 
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photosynthetic reaction center, subunit H, bacterial
This model describes the photosynthetic reaction center H subunit in non-oxygenic photosynthetic bacteria. The reaction center is an integral membrane pigment-protein that carries out light-driven electron transfer reactions. At the core of reaction center is a collection light-harvesting cofactors and closely associated polypeptides. The core protein complex is made of L, M and H subunits. The common cofactors include bacterichlorophyll, bacteriopheophytins, ubiquinone and no-heme ferrous iron. The net result of electron tranfer reactions is the establishment of proton electrochemical gradient and production of reducing equivalents in the form of NADH. Ultimately, the process results in the reduction of C02 to carbohydrates(C6H12O6) In non-oxygenic organisms, the electron donor is an organic acid rather than water. Much of our current functional understanding of photosynthesis comes from the structural determination and spectroscopic studies on the reaction center of Rhodobacter sphaeroides. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Statistics
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PSSM-Id: 273470
Aligned: 6 rows
Threshold Bit Score: 408.088
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2RCR_H         1 MVGVTAFGNFDLASLAIYSFW-IFLAGLIYYLQTENMREGYPLENEDGt---PAANQG-PFPLPKPKTFILPHGRgTLTV 75  Rhodobacter sph...
P11846         1 MVGVTAFGNFDLASLAIYSFW-IFLAGLIYYLQTENMREGYPLENEDGt---PAANQG-PFPLPKPKTFILPHGRgTLTV 75  Rhodobacter sph...
P19056         1 MVGVNFFGDFDLASLAIWSFW-AFLAYLIYYLQTENMREGYPLENDDGk---LSPNQG-PFPVPSPKTFDLADGR-KIVV 74  Rhodobacter cap...
WP_011388375   1 MNKGDITGYMDVAQVVLYAFW-IFFAGLIIYLRREDRREGYPLEDAISgkinSLQGLGsVFSIARPKIFKLKTGA-TYAA 78  Rhodospirillum ...
P06008         1 MYHGALAQHLDIAQLVWYAQWlVIWTVVLLYLRREDRREGYPLVEPLGlv-kLAPEDGqVYELPYPKTFVLPHGG-TVTV 78  Blastochloris v...
2PRC_H         1 xYHGALAQHLDIAQLVWYAQWlVIWTVVLLYLRREDRREGYPLVEPLGlv-kLAPEDGqVYELPYPKTFVLPHGG-TVTV 78  Blastochloris v...
2RCR_H        76 PGPESEDRP----IALARTAVSEGFPHAPTGDPMKDGVGPASWVARRDLPELDGHGHNKIKPMKAAAGFHVSAG-KNPIG 150 Rhodobacter sph...
P11846        76 PGPESEDRP----IALARTAVSEGFPHAPTGDPMKDGVGPASWVARRDLPELDGHGHNKIKPMKAAAGFHVSAG-KNPIG 150 Rhodobacter sph...
P19056        75 PSVENEEAHrrtdLALERTSVNEGYPFRPTGNPMLDGVGPASWVPRRDEPEVDAHGHNKIQPMRKTE-MKVSAG-RDPRG 152 Rhodobacter cap...
WP_011388375  79 PNFKRDAVA----IKATRTAPTAGAPFEPTGNPMTDAVGPAAYALRDELPDLTLGGQPAIVPLRVAPTFSVAAEdTDPRG 154 Rhodospirillum ...
P06008        79 PRRRPETRE----LKLAQTDGFEGAPLQPTGNPLVDAVGPASYAERAEVVDATVDGKAKIVPLRVATDFSIAEGdVDPRG 154 Blastochloris v...
2PRC_H        79 PRRRPETRE----LKLAQTDGFEGAPLQPTGNPLVDAVGPASYAERAEVVDATVDGKAKIVPLRVATDFSIAEGdVDPRG 154 Blastochloris v...
2RCR_H       151 LPVRGCDLEIAGKVVDIWVDIPEQMARFLEVELKDG--STRLLPMQ----MVKVQSNRVHVNALSSDLFAGIPTIKSPTE 224 Rhodobacter sph...
P11846       151 LPVRGCDLEIAGKVVDIWVDIPEQMARFLEVELKDG--STRLLPMQ----MVKVQSNRVHVNALSSDLFAGIPTIKSPTE 224 Rhodobacter sph...
P19056       153 MPVQAGDTEVVGKIVDMWVDIPEQLVRYLEVELNSG--KKKLLPMT----MLKIWSDRVRVNAITSDLFDTIPDIKSPDV 226 Rhodobacter cap...
WP_011388375 155 LPVVDRKGAVAGKVTDLWIDRASIAIRYLEVELAATpgRKVLLPFAatriNAKTKSKTVTVQSILARHFANVPTIAKTDS 234 Rhodospirillum ...
P06008       155 LPVVAADGVEAGTVTDLWVDRSEHYFRYLELSVAGSa-RTALIPLG----FCDVKKDKIVVTSILSEQFANVPRLQSRDQ 229 Blastochloris v...
2PRC_H       155 LPVVAADGVEAGTVTDLWVDRSEHYFRYLELSVAGSa-RTALIPLG----FCDVKKDKIVVTSILSEQFANVPRLQSRDQ 229 Blastochloris v...
2RCR_H       225 VTLLEEDKICGYVAGGLMYAAPKR 248 Rhodobacter sphaeroides
P11846       225 VTLLEEDKICGYVAGGLMYAAPKR 248 Rhodobacter sphaeroides
P19056       227 VTKLEEDKISAYVAGGYMYAKGVK 250 Rhodobacter capsulatus
WP_011388375 235 ITRREEDKVMAYYSSGYLYS--DR 256 Rhodospirillum rubrum
P06008       230 ITLREEDKVSAYYAGGLLYATPER 253 Blastochloris viridis
2PRC_H       230 ITLREEDKVSAYYAGGLLYATPER 253 Blastochloris viridis
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