Conserved Protein Domain Family
mdcA

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TIGR01110: mdcA 
malonate decarboxylase, alpha subunit
This model describes malonate decarboxylase alpha subunit, from both the water-soluble form as found in Klebsiella pneumoniae and the form couple to sodium ion pumping in Malonomonas rubra. Malonate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases. Essentially, it couples the energy derived from decarboxylation of a carboxylic acid substrate to move Na+ ion across the bilayer. Functional malonate decarboylase is a multi subunit protein. The alpha subunit enzymatically performs the transfer of malonate (substrate) to an acyl carrier protein subunit for subsequent decarboxylation, hence the name: acetyl-S-acyl carrier protein:malonate carrier protein-SH transferase. [Transport and binding proteins, Cations and iron carrying compounds, Energy metabolism, Other]
Statistics
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PSSM-Id: 273448
Aligned: 4 rows
Threshold Bit Score: 1047.9
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAC45400   7 WDKLSTDTEERMNAANelfSDRKVVPSQNGVALLEAVIRAGDRINLEGNNQKQADFLAECLGSCDSEKINNLHMVQSAVP 86  Malonomonas rubra
AAC45453  11 WNRRRTEKQRRLTEAN---MPGKVIPTDQLVSVLENLLAPGDRVVLEGNNQKQADFLSRMLAEVNPQKIHDLHMIMPSVG 87  Klebsiella pneumoniae
BAA36204  11 WSRRRAEKQRRLDRVRh-lADGVVLPTERMVEALELLLAPGDRVVLEGNNQKQADFLSRSLAKVDPGRLHDLHMIMPSVS 89  Pseudomonas putida
AAB97627   7 WDKQRTRRQEKLNLAQqkgFAKQVEHAR-AIELLETVIASGDRVCLEGNNQKQADFLSKCLSQCNPDAVNDLHIVQSVLA 85  Acinetobacter calco...
AAC45400  87 LPIHLDIFDKGIAKKLDFAYGGPMAAKVAEFLREGKLELGAIHTYLELFARYFMDLTPRVSLICAYEGDKDGNLYTGFNT 166 Malonomonas rubra
AAC45453  88 RSEHLDLFEKGIARKLDFSFSGTQSLRISQLLEDGLLEIGAIHTYIELYSRLYVDLSPNVALIAGYKADRKGNLYTGPST 167 Klebsiella pneumoniae
BAA36204  90 RAEHLDLFERGIARKLDFSFAGPQSLRIGQLLEDGLLEVGAIHTYIELYSRLLVDLIPNVTLVAGFMADRDGNLYTGPST 169 Pseudomonas putida
AAB97627  86 LPSHIDVFEKGIASKVDFSFAGPQSLRLAQLVQQQKISIGSIHTYLELYGRYFIDLTPNICLITAHAADREGNLYTGPNT 165 Acinetobacter calco...
AAC45400 167 EDTPVIAEATKFRQGIVIAQVNKLVD---KVQRVDIPGEWVDAVIESPKPFYLEPLFTRDPANITDTQVLMGMMALKGIY 243 Malonomonas rubra
AAC45453 168 EDTPALVEAAAFHDGIVIAQVNELVDdecDLPRVDIPGSWIDYVVVADKPFFIEPLFTRDPRLIKQEHILMAMMAIKGIY 247 Klebsiella pneumoniae
BAA36204 170 EDTPALVEPAAFSDGIVIAQVNQLVDrvdDLPRVDIPASWVDFVVVADQPFYIEPLFTRDPRHIKPVHVLMAMMAIRGIY 249 Pseudomonas putida
AAB97627 166 EDTPAIVEATAFKSGIVIAQVNEIVD---KLPRVDVPADWVDFYIESPKHNYIEPLFTRDPAQITEVQILMAMMVIKGIY 242 Acinetobacter calco...
AAC45400 244 GEYGVQRLNHGIGFFTAAIELLLPTYGNELGLKGKICKHFALNPHPTMIPAIEDGWVESIHSFGGELGMQKYCEARPDIF 323 Malonomonas rubra
AAC45453 248 AEHQVQSLNHGIGFNTAAIELLLPTYGEQLGLKGKICKHWTLNPHPTLIPAIESGWVESVHCFGGELGMEEYIRARPDIF 327 Klebsiella pneumoniae
BAA36204 250 EKHQVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIEAGWVQSVHCFGTEMGMEDYIAQRPDVF 329 Pseudomonas putida
AAB97627 243 APYQVQRLNHGIGFDTAAIELLLPTYAASLGLKGQICTNWALNPHPTLIPAIESGFVDSVHSFGSEVGMEDYIKERPDVF 322 Acinetobacter calco...
AAC45400 324 FIGPDGSMRSNRAYSQTAGHYATDMFIGGTLQIDKYGNSSTATASRVAGFGGAPNMGCDAKGRRHVTDSWLKCGAEFEDq 403 Malonomonas rubra
AAC45453 328 FTGPDGSMRSNRAFCQLAGQYAVDMFIGSTLQVDGLANSSTVTRGRLSGFGGAPNMGHDPHGRRHATPAWLNMITEPDP- 406 Klebsiella pneumoniae
BAA36204 330 FTGRDGSMRSNRMMCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHATPAWLDMTVPDTM- 408 Pseudomonas putida
AAB97627 323 FTGSDGSMRSNRAFSQTAGLYACDSFIGSTLQIELQGNSSTATVDRISGFGGAPNMGSDPHGRRHASYAYTKAGREATDg 402 Acinetobacter calco...
AAC45400 404 aallgdMPRGKRLVVQMQETFKEKMDPSFVEKLDAWNLAKNANLDLAPVMIYSDDLTHIVTEEGIAYLAKCRGLEERMAA 483 Malonomonas rubra
AAC45453 407 ------MQRGKKLVVQMVETFQAGVKPTFVETLDAVEVAKTSGMPLAPVMIYGDDVTHVLTEEGIAYLYRAESLEERRAM 480 Klebsiella pneumoniae
BAA36204 409 ------LERGRKLVVQMVETYQEGGKPTFVETLDAVEVAKKAGMPLAPVMIYGDDVTHLLTEEGIAYLYKARSLQERQQM 482 Pseudomonas putida
AAB97627 403 -----kLIKGRKLVVQTVETYREHMHPVFVEELDAWQLQDKMDSELPPIMIYGEDVTHIVTEEGIANLLLCRTDEEREQA 477 Acinetobacter calco...
AAC45400 484 IRGVAGYTEVGLSADPKETKTLRERGIVKTPEDLGIDRSRANRSMLAAKSVKDLVDCSGGLYEPPARFVNW 554 Malonomonas rubra
AAC45453 481 VAAVAGITDIGLGVDAKRVAALRQSGKVVYPEDLGIRRSDATRSLLAAGSVANLVEWSDGLYNPPAKFRSW 551 Klebsiella pneumoniae
BAA36204 483 IAAVAGVTAIGLRHDPKDTLRMRQQGLIALPEDLGIRRSDASRELLAARSIADLVEWSGGLYNPPARFRSW 553 Pseudomonas putida
AAB97627 478 IRGVAGYTPVGLKRDAAKVEELRQRGIIQRPEDLGIDPTQVSRDLLAAKSVKDLVKWSGGLYSPPSRFRNW 548 Acinetobacter calcoaceticus
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