1F76,1D3G


Conserved Protein Domain Family
pyrD_sub2

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TIGR01036: pyrD_sub2 
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dihydroorotate dehydrogenase, subfamily 2
This model describes enzyme protein dihydroorotate dehydrogenase exclusively for subfamily 2. It includes members from bacteria, yeast, plants etc. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]
Statistics
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PSSM-Id: 273408
Aligned: 7 rows
Threshold Bit Score: 501.237
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1F76_A         3 YPFVRKALFQLDPERAHEFTFQQLRRITGTPFEA-LVRQKVPAK----PVNCXGLTFKNPLGLAAGLDKDGECIDALGAX 77  Escherichia col...
P05021         3 YPFVRKALFQLDPERAHEFTFQQLRRITGTPFEA-LVRQKVPAK----PVNCMGLTFKNPLGLAAGLDKDGECIDALGAM 77  Escherichia coli
O25655         3 YSLVKKYLFSLDAEDAHEKVCKILRMLSSSPFLCnLIDSQWGYQnpklENEILGLHFPNPLGLAAGFDKNASMLRALMAF 82  Helicobacter py...
O06236         2 YPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRrLLRRLLGPTdpvlASTVFGVRFPAPLGLAAGFDKDGTALSSWGAM 81  Mycobacterium t...
XP_008953110  11 EHLMPTLQGLLDPESAHRLAVRFTSLG-----L--LPRARFQDSdm-lEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKM 82  pygmy chimpanzee
P45477         2 YQLFRHGIFQMDAEKAHNFTIQCLKLAGNPLFQP-ILKSLIHAPkg-fPKTVMGVNFPNPIGLAAGADKNGDAIDGFGAL 79  Haemophilus inf...
1D3G_A        11 EHLMPTLQGLLDPESAHRLAVRFTSLG------L-LPRARFQDSdm-lEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKM 82  human
1F76_A        78 GFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRXGFNNLGVDNLVENVKK--------AHYDGVLGINIGKNKDTPVE 149 Escherichia col...
P05021        78 GFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKK--------AHYDGVLGINIGKNKDTPVE 149 Escherichia coli
O25655        83 GFGYLEAGTLTNEAQVGNERPRLFRHIEEESLQNAMGFNNYGAILGVRSFKRf-------APYKTPIGINLGKNKHIEQA 155 Helicobacter py...
O06236        82 GFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGARALAIRLAR--------HRPEIPIGVNIGKTKKTPAG 153 Mycobacterium t...
XP_008953110  83 GFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRArqqkqaklTEDGLPLGVNLGKNK--TSV 160 pygmy chimpanzee
P45477        80 GFGFLELGTVTPVAQDGNAKPRQFRLIEAEGIINRNGFNNNGIDYLIENVKN--------ARYKGVIGINIGKNKFTSLE 151 Haemophilus inf...
1D3G_A        83 GFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRArqqkqaklTEDGLPLGVNLGKNK--TSV 160 human
1F76_A       150 QGKDDYLICXEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAXHHkyVPIAVKIAPDLSEEELIQ 229 Escherichia col...
P05021       150 QGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHkyVPIAVKIAPDLSEEELIQ 229 Escherichia coli
O25655       156 HALEDYKAVLSKCLNIGDYYTFNLSSPNTPNLRDLQNKAFVHELFCMAKEMT-----HK----PLFLKIAPDLETDDMLE 226 Helicobacter py...
O06236       154 DAVNDYRASARMVGPLASYLVVNVSSPNTPGLRDLQAVESLRPILSAVRAETS---------TPVLVKIAPDLSDSDLDD 224 Mycobacterium t...
XP_008953110 161 DAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHR--PAVLVKIAPDLTSQDKED 238 pygmy chimpanzee
P45477       152 QGKDDYIFCLNKAYNYAGYITVNISSPNTPDLRQLQYGDYFDDLLRSIKDRQAILANQYNkyVPIAVKIAPDLTESELVQ 231 Haemophilus inf...
1D3G_A       161 DAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHR--PAVLVKIAPDLTSQDKED 238 human
1F76_A       230 VADSLVRHNIDGVIATNTTLDRS-L-VQGXKNC-DQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAARE 306 Escherichia col...
P05021       230 VADSLVRHNIDGVIATNTTLDRS-L-VQGMKNC-DQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAARE 306 Escherichia coli
O25655       227 IVNSAIGAGAHGIIATNTTIDKS-L-VFAPK----EMGGLSGKCLTKKSREIFKELAKAFFNKSVLVSVGGISDAKEAYE 300 Helicobacter py...
O06236       225 IADLAVELDLAGIVATNTTVSRD-G-LTTPGVDrLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWE 302 Mycobacterium t...
XP_008953110 239 IASVVKELGIDGLIVTNTTVSRP-AgLQGALRS--ETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALE 315 pygmy chimpanzee
P45477       232 IADTLVRHKMDGVIATNTTISRD-T-VTGMKNA-EQQGGLSGKPLQHKSTEIIKRLHQELKGQIPIIGSGGIDGLQNAQE 308 Haemophilus inf...
1D3G_A       239 IASVVKELGIDGLIVTNTTVSRPaG-LQGALRS--ETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALE 315 human
1F76_A       307 KIAAGASLVQIYSGFIFKGPPLIKEIVTHI 336 Escherichia coli K-12
P05021       307 KIAAGASLVQIYSGFIFKGPPLIKEIVTHI 336 Escherichia coli
O25655       301 RIKMGASLLQIYSAFIYNGPNLCQNILKDL 330 Helicobacter pylori 26695
O06236       303 RITAGASLLQGYTGFIYGGERWAKDIHEGI 332 Mycobacterium tuberculosis
XP_008953110 316 KIRAGASLVQLYTALTFWGPPVVGKVKREL 345 pygmy chimpanzee
P45477       309 KIEAGAELLQVYSGLIYHGPKLVKELVKNI 338 Haemophilus influenzae Rd KW20
1D3G_A       316 KIRAGASLVQLYTALTFWGPPVVGKVKREL 345 human
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