Conserved Protein Domain Family
2A067

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TIGR00921: 2A067 
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family
Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Statistics
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PSSM-Id: 273340
Aligned: 4 rows
Threshold Bit Score: 901.512
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM05604      13 LNNRPVIMAVVLLLVLLSLQGAQYIEMASGTETQVSKDSQLYKDYDHLFLNT--FSTESVIVMVE----GNDVKTEDVVK 86  Methanosarcina ...
AAM02269       1 MRFRTAIILSFLALTAVMAYGALHLNVEVDQTKYLPDRFESMKWQHVVERELg-TSTKTLLIVIE----ADDVTRKPVLD 75  Methanopyrus ka...
WP_010868797  10 VIYRHSLAVVTMFLLILSAYGITQLRFETDLSKQLPEDLEAVKSYFTLQNEFggSGSALIYVKIKnndnVVDIRDPKIIE 89  Pyrococcus abyssi
WP_010878724  14 ARRPGFVISIISIILILSAFSAQNVGLTSGTESMFSKDNVIYRQYKLYQKDFg-VGADQLFVLIK----GDDVVNSEVYQ 88  Archaeoglobus f...
AAM05604      87 AADRLGQQALLVPGVTKVSSAASIMKQINYAesgrSKIPNSDREVRESIESYPEYFE--NLVLDETHTLIVIQIEGSSTS 164 Methanosarcina ...
AAM02269      76 YMRRIEDRLRSKPYVENVRGAPDVLRESPAN----FPAAVTMPGLRPLMSEMERSKEm-FVSKDHKVAIIRVGLKSDADY 150 Methanopyrus ka...
WP_010868797  90 AMYSLEQRLREKEYVTDTFSIADLMVQILG------RLPKNMDEVKFVLNMLPPEARngLISGDYSSTIIIVNLNREKNQ 163 Pyrococcus abyssi
WP_010878724  89 YLLDLQKRIEEIEGVSSVVSPASIVSSLYGG------LPSDESKISIATSLYAS-----DLVPKPTLAMMIIQLGTADDT 157 Archaeoglobus f...
AAM05604     165 QQKEDiinNIEIALEEADFPPGYKLTVTGSPSLRLDIESEMGASMGVLLGIAGILMVVVLLLVFKHVRWG----LLPLPV 240 Methanosarcina ...
AAM02269     151 RKVVP---DVRRSLERDKPKSVKFADVTGSPAINYDFYRGFLKDLVTVTALVSAAVAAVLYVDFRRWWAP----VLGLTI 223 Methanopyrus ka...
WP_010868797 164 KALVRvynDIEREIERTNFPQGVEVVLTGDLGITYKILEMLQNDMNRTMAISGIIVVLILLYFYKSPIRM----LVPLVP 239 Pyrococcus abyssi
WP_010878724 158 KQEEia-iEVEKVISFTNPPHGLVLQLTGGPALSYQIEREIGKSFGITMMVSIILMVLLLFLTFSGAVRKkytaFLPLVI 236 Archaeoglobus f...
AAM05604     241 VLFGVLFTFGAMGYLG-VPMTMVSMAAFPVLIGIGIDYSIQFHNRMEEEIHCG-KTSSQALVSTVKNTAPAVLIALAMTA 318 Methanosarcina ...
AAM02269     224 ILSAVAWVLGIMYWLGfAPFYATVLLTVVLMLGVGIDYVIFTLTRFQEEYDIKgRAKGEAILTAVRRAGRAVLITGLTAS 303 Methanopyrus ka...
WP_010868797 240 LIFGVVMTLGFMGLLG-IPLDIATTTVGAMIIGMGIDYGVHVTNRYYEERGKG-KSLEEAAEEAIAETGKALLGAALTTI 317 Pyrococcus abyssi
WP_010878724 237 SVMSVTVVYGLMPILG-IPLSEHTNGALPMLIGLAIEYGAQLQNRYEEERREG-RDVDDAVVISITRTGLAIVMALITTV 314 Archaeoglobus f...
AAM05604     319 LGFVSLFTSVVPMIQDFGKLLLIGVIMCYLSSLFFGLVTLYSFDWIArknpcglfrkkgdeegkvgengnngpkrdlens 398 Methanosarcina ...
AAM02269     304 AGFAALALSEFRMVSEIGLGIVAGILTAVALTLLVLPSLLQSIPIGR--------------------------------- 350 Methanopyrus ka...
WP_010868797 318 AGFLALSISILPSLKRLSVSLVMGLGLAALNAVIVTPALAILEEEFRekvmkkk-------------------------- 371 Pyrococcus abyssi
WP_010878724 315 IGFMSMLAPGMPAMAQFGIISSLGLIVAYLLTLTFLPAVLKLIDHWNdakeqk--------------------------- 367 Archaeoglobus f...
AAM05604     399 lcagnipthEPGAIEKALKKVTGFTIRHSTVILVVAFLTCCAGLYADQSIPIQTDTNSFIPQDMPSLINYKNMQSIMSGS 478 Methanosarcina ...
AAM02269     351 ---------KSSEKKEESWKVLSIPVRHPVPAIVALLAITGLLGYGAAGVKPEVNIEKFLGHNLPSLKARDVLEKHMDVS 421 Methanopyrus ka...
WP_010868797 372 --eiiaiggGKSKISFIFSMLGKAIKRSPWTALLIALIISGVSLYGASKITTEVRLEKMIPTDLPEIQALSDIRSEFGGQ 449 Pyrococcus abyssi
WP_010878724 368 ----reeeksVGTLERSLSAISTLTATRPVGILVAASIIVLFGLYAAPQIGLETNYNKYVPQDLTAMQRFKEIERLVGGQ 443 Archaeoglobus f...
AAM05604     479 GDHLNVILKVDDASDPELLEWMDEFSQHEVANRGH--VYSATSIVDLVKERNGGTIPETSeei----qaIYDEIPASEKG 552 Methanosarcina ...
AAM02269     422 HHFATIVVEARDVRDPKVVRFMEKLKRDAKRTGVAarVFGAPDVIGMEKTVERLPAPIRS---------ALEPKVEDMEK 492 Methanopyrus ka...
WP_010868797 450 -DEVTILIKADDVRDPTLVRDILRFEREIKADSYInnVFETQSIADVVIQKYGYIPQDK------------EKISEAIEG 516 Pyrococcus abyssi
WP_010878724 444 --ATYTLVLEVDELNAETLKEIDELSKYIVEKEEL--IYDYSSITKLISEVRKAYGFEGLpesdaelmqilSALPQEEVS 519 Archaeoglobus f...
AAM05604     553 EYIEGGQllhidlDIGTAMADLEITGIEELRDIVLADIQWMQPPPGVTVTITGNSVVIIDMVAGLTTGRSMMTLLGVFLV 632 Methanosarcina ...
AAM02269     493 GVISGDG------KVAVIQVQLKPGDPKVQGRKILDMVRHEHPPTGVKVGVTGLPVAFAEMHEQVNEDMRRSTIASAIGV 566 Methanopyrus ka...
WP_010868797 517 SSLVSSDysmtiiKLKGNFMGVTQSEFNRIMEYFERAIQRADFPPGVKVELAGESYLNYVLNDLVNEELGKISTIGTLIV 596 Pyrococcus abyssi
WP_010878724 520 RYISGGQi-----AVHFSSNADSQDEYISTHKSIVRDVEFFGWSGG--YYVTGGPVIYGEMGRLMTSGQTTMTVVAYALI 592 Archaeoglobus f...
AAM05604     633 LIGLLVVYRDIVKALSPIIPMLVVIGWSGLVMT--AMDIAYNPMTAVMGALILGVGSEYSILMMERYFEERDAgLSPVDA 710 Methanosarcina ...
AAM02269     567 LAIPTIAFRNPIPPVFGLVAIGSGILWAIGLLGgvLRIVPSFLAMQTTICILLGIGMDYCVFLASRYREERKE-HGVKEA 645 Methanopyrus ka...
WP_010868797 597 VMVVFAIFRRPTVSIAMIMPMFLGALWTIGYMG--LAGIPFSQTLAGVVSMIVGLGVDYGMHITHRFLEELNE--GNKTP 672 Pyrococcus abyssi
WP_010878724 593 IMLLLAVYRSIRKAVVPLIAITSVIGAMNTIMF--LTGTKQTMISIALNSITLGLGIDFSIHVLERYFEERAAf-SPVEA 669 Archaeoglobus f...
AAM05604     711 IYQASSTTGTALIASGATTVFGFSALIASPFPMISSFGLVTVIDVLLAMIVTFVIFPPLIVL 772 Methanosarcina acetivorans C2A
AAM02269     646 WTHTMERAGPGVLFSGLTSAIGFLSLLLSHTGIMRNMGLYQGIGVLSTLTLVLVGFPALYVV 707 Methanopyrus kandleri AV19
WP_010868797 673 IITALESVGPGIFVGALTTAGGFLALLSAQLTAIHDFGRVLAVGIFASMFAAYLVTPAILQL 734 Pyrococcus abyssi
WP_010878724 670 VRRTIERTGKAITTSALTMAGGFGSLMFSTFPIMQNFGFIALVAILFSLLAALTVVPAFLML 731 Archaeoglobus fulgidus
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