1BS0


Conserved Protein Domain Family
bioF

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TIGR00858: bioF 
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8-amino-7-oxononanoate synthase
7-keto-8-aminopelargonic acid synthetase is an alternate name. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]
Statistics
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PSSM-Id: 273303
Aligned: 17 rows
Threshold Bit Score: 440.551
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1BS0_A        24 YPVAqgagrwlvaDDr--qYLNFSSNDYLGLSHHPQIIRA-WQQGAeQFG-IGSGGSGHVSGYSVVHQaLEEELAEWLGY 99  Escherichia coli
BAA10465      72 QIITqgpgpeiklEGq--rLVNFASNDYLGLASHPHLKTA-AIKAIaEWG-TGSTGSRLLSGHRQLHQdLEQAIARWKGT 147 Synechocystis s...
P12998        24 YPVAqgagrwlvaDDr--qYLNFSSNDYLGLSHHPQIIRA-WQQGAeQFG-IGSGGSGHVSGYSVVHQaLEEELAEWLGY 99  Escherichia col...
P44422        21 PDLVhqgr-yitrENr--kMLNMSSNDYLGLASNENLRQSfLQQYGgNFPsFTSSSSRLLTGNFPIYTdLEELVAQRFQR 97  Haemophilus inf...
O06621        34 RPRpav-----------atELDLASNDYLGLSRHPAVIDG-GVQALrIWG-AGATGSRLVTGDTKLHQqFEAELAEFVGA 100 Mycobacterium t...
WP_003113248  22 PLLEsaqgpdvvvDGq--pLLAFCSNDYLGLANHPEVIAA-LRAGAeRWG-VGGGASHLVVGHSGPHHeLELALAEFTGR 97  Pseudomonas aer...
WP_000175226  26 QLLDrsaqgeliqQDr--tYLNFSSNDYLGLANDAELVQA-WQTGLaRFG-AGSGASPMVTGFSSAHAeLEHELCHWLGY 101 Vibrio cholerae
WP_019301420  27 RQVGrrdgvrleiDGr--wLTGFCSNDYLGLSQQFEVIAA-LQDAAaRDG-AGATASHLICGHHTAHEtLEREIAEWLGY 102 Xanthomonas oryzae
WP_011057171  24 PLLSgtpaavvsvGEpprpLINFCSNDYLGLANHPQVKAA-AIAAIqQWG-TGATGSRLLSGQRHLHAqLERAIAQWKGT 101 Thermosynechoco...
WP_010919450  81 SPTRrhdgavverDGk--rMISFSCNDYLNLSQHHLVRAA-AAEAAlNYG-AGAAASRLVTGDHPLLSdLEKRLAHLKGT 156 Caulobacter vib...
1BS0_A       100 SRALLFISGFAANQAVIAAMM-AKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPC--PGQQMVVTEG 176 Escherichia coli
BAA10465     148 EAALVFSSGYLANLGTITALV-GKRDLILADEYNHSSLKRGAQLSGAKVINYDHGCPEVLTDLLMKHRdnHRRCLILSDG 226 Synechocystis s...
P12998       100 SRALLFISGFAANQAVIAAMM-AKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPC--PGQQMVVTEG 176 Escherichia col...
P44422        98 ESALLFNSGYHANIGILPALT-TTKSLILADKLVHASMIDGIRLSQCEFFRYRHNDYEHLKNLLEKNVgkFDRTFIVTES 176 Haemophilus inf...
O06621       101 AAGLLFSSGYTANLGAVVGLS-GPGSLLVSDARSHASLVDACRLSRARVVVTPHRDVDAVDAALRSRD--EQRAVVVTDS 177 Mycobacterium t...
WP_003113248  98 PRALLFSTGYMANLGAVAALV-GKGDTVLEDRLNHASLLDAGLLSGARFSRYLHNDPASLAARLDKA---EGNTLVVTDG 173 Pseudomonas aer...
WP_000175226 102 ERAVLFSSGFSANQALLFTLL-EKEDLLLQDKLNHASLMEAGMLSPATMKRFKHNDTEHLRQLLHE----QSNSLVVTEG 176 Vibrio cholerae
WP_019301420 103 PSALLFGNGFIANLAVQQALLsEEDDVCVQDRLNHASLLDATRLAGCRLRRYPHLDVEGAMRQLKGSP--EGAAMLASDG 180 Xanthomonas oryzae
WP_011057171 102 EAALVFSSGTAANLGTIAALV-DQRDLVLGDAYNHACLKKGARLSHATFYEYPHNNVAALAQLLETHRsqYRRCLILTDG 180 Thermosynechoco...
WP_010919450 157 EAACVFGSGYLANTGVIPTLV-GPGDVILIDALAHACIWAGAQLSGAKVVKFAHNDPADLERLLLAERgaARHALVATDG 235 Caulobacter vib...
1BS0_A       177 VFSMDGDSAPLAEIQQVTQQHN-GWLMVDDAHGTGVIGEqgrGSCWLQKVKPE---LLVVTFGKGFGVSGAAVLCSSTVA 252 Escherichia coli
BAA10465     227 VFSMDGDLCPLPQLVAIAEEFQ-SMLLVDDAHGTGTMGKmgtGCREHFQLP-VgdwIQVGTLSKALGSLGGYVAGSASLI 304 Synechocystis s...
P12998       177 VFSMDGDSAPLAEIQQVTQQHN-GWLMVDDAHGTGVIGEqgrGSCWLQKVKPe---LLVVTFGKGFGVSGAAVLCSSTVA 252 Escherichia col...
P44422       177 VFSMDGDVADLKQLVQLKKQFPnTYLYVDEAHAVGVYGQnglGIAERANV-IAdidLLVGTFGKALASMGAYVVCDQILK 255 Haemophilus inf...
O06621       178 VFSADGSLAPVRELLEVCRRHG-ALLLVDEAHGLGVRGGg-rGLLYELGLAGApdvVMTTTLSKALGSQGGVVLGPTPVR 255 Mycobacterium t...
WP_003113248 174 VFSMDGNLADLPALAAVAQARG-AWLMVDDAHGFGPLGAsggGIVEHFGLGQEqvpVLIGTLGKGFGTAGAFVAGSEELI 252 Pseudomonas aer...
WP_000175226 177 VFSMDGDCAPLAQIATLVKQR--AWLMVDDAHGIGVLGEdgaGSCQAAGIHPE---ILVVTFGKAFGLAGAAVLCDAHVG 251 Vibrio cholerae
WP_019301420 181 VFSMDGDVAPLRALSLVARMQN-ALFYVDDAHGVGVLGPqgrGCVADAGLGVAevpLQLVTLGKALGGYGAVVVGDDALV 259 Xanthomonas oryzae
WP_011057171 181 VFSMDGDVAPLAKILALAEAYT-AMVLVDDAHGTGVLGTngaGTLAALGQS-SptiIQMGTLSKALGSLGGYIAGCQALI 258 Thermosynechoco...
WP_010919450 236 VFSMDGDIAPLDALSELCQRHD-AWLLSDDAHGVGVLAEg-rGSGALFPTAKIp--LQMGTLSKALGSYGGYLCGSQAVV 311 Caulobacter vib...
1BS0_A       253 DYLLQFARHLIYSTSMPPAQAQALRASLAVIRsdEGdARREKLAALITRFRAGVQDLP---FTLA--DSCSAIQPlIVGD 327 Escherichia coli
BAA10465     305 DFLRNRAATWIYTTGLSPADTAAALAAIQLIQ--REpERIVQLQLNVDYLATGLESLTklnFRRS--PINSPILWvGAAN 380 Synechocystis s...
P12998       253 DYLLQFARHLIYSTSMPPAQAQALRASLAVIRsdEGdARREKLAALITRFRAGVQDLP---FTLA--DSCSAIQPlIVGD 327 Escherichia col...
P44422       256 ECLINQMRPLIFSTALPPFNVAWTHFIFERLP--QLsKERTHLEQLSAFLRQEVEHRT----QIM--PSQTCIVPyILGE 327 Haemophilus inf...
O06621       256 AHLIDAARPFIFDTGLAPAAVGAARAALRVLQ--AEpWRPQAVLNHAGELARMCGVAA---------VPDSAMVSvILGE 324 Mycobacterium t...
WP_003113248 253 ETLIQYARPYIYTTSQPPAVACATLKSLELLR--REsWRRQHLAALIARFRHGAEALG---LTLM--DSFTPIQPiLVGG 325 Pseudomonas aer...
WP_000175226 252 DYLTQFARHHVYSTAMPPAQAHALTHAARMIQ--SQsWRREQLAELLACFDEQCRNIP---G-FV--ATQTPIKPwLLGS 323 Vibrio cholerae
WP_019301420 260 RHLAETARPYIYTTALPPAQVAATLAAVRLAR--RDdWRRTRLVELIAAFRDGARKHG---FELM--ASDTPIQPlLCGE 332 Xanthomonas oryzae
WP_011057171 259 TYLQHRASTWIYSTGLSPADAAAALAALEQLQ--TDpSLRQALGDRIQQLEKGLQALG---CPVLprPLPTPIFClPAPD 333 Thermosynechoco...
WP_010919450 312 DLLKTRARTLVYATGLPPASAAAALASLDLIA--ANpTMTEVPLAKARLFTRRLGLPE----------ACSPIVPvVLGS 379 Caulobacter vib...
1BS0_A       328 NSrALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLH 381 Escherichia coli
BAA10465     381 PAmALEMAKHLREQGIFAPAIRPPTVP--HSRIRFSVMATHSPGHIDQLLEVLD 432 Synechocystis sp. PCC 6803
P12998       328 NSrALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLH 381 Escherichia coli K-12
P44422       328 NEaTLAKAKDLQEQGYYCLPIRPPTVPKNTSRIRLSLTADMTADEVRQFAVHL- 380 Haemophilus influenzae Rd KW20
O06621       325 PEsAVAAAAACLDAGVKVGCFRPPTVPAGTSRLRLTARASLNAGELELARRVLT 378 Mycobacterium tuberculosis
WP_003113248 326 SRqAVALAGMLRARGIMVGAIRPPTVPANSARLRVTLSAAHSEAQVDRLLEALg 379 Pseudomonas aeruginosa
WP_000175226 324 SDsALSASHELKQQGIWVSAIRPPTVPVGSARLRITITAAHTQAQIRRLSEQLK 377 Vibrio cholerae
WP_019301420 333 EAtVMAMSAALEQAGFMVGAIRPPTVPEGKARLRVTLSALHTPQQVQALIDAIv 386 Xanthomonas oryzae
WP_011057171 334 PAtVLQWGQELQEAGCWVAAVRPPTVP--FSRLRITLRADHTPGHIEQllaala 385 Thermosynechococcus elongatus
WP_010919450 380 AEsALAASTELQNQGFLVVAIRPPTVPDGTARLRIAFSAAHEDADIIRLADAIA 433 Caulobacter vibrioides
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