Conserved Protein Domain Family
EIIB_glc

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TIGR00826: EIIB_glc 
PTS system, glucose-like IIB component
The PTS Glucose-Glucoside (Glc) Family (TC 4.A.1) Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Glc family includes permeases specific for glucose, N-acetylglucosamine and a large variety of a- and b-glucosides. However, not all b-glucoside PTS permeases are in this class, as the cellobiose (Cel) b-glucoside PTS permease is in the Lac family (TC #4.A.3). These permeases show limited sequence similarity with members of the Fru family (TC #4.A.2). Several of the E. coli PTS permeases in the Glc family lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). Most of these permeases have the B and C domains linked together in a single polypeptide chain, and a cysteyl residue in the IIB domain is phosphorylated by direct phosphoryl transfer from IIAglc(his~P). Those permeases which lack a IIA domain include the maltose (Mal), arbutin-salicin-cellobiose (ASC), trehalose (Tre), putative glucoside (Glv) and sucrose (Scr) permeases of E. coli . Most, but not all Scr permeases of other bacteria also lack a IIA domain. This model is specific for the IIB domain of the Glc family PTS transporters. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Statistics
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PSSM-Id: 273288
Aligned: 14 rows
Threshold Bit Score: 61.6054
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P54715   407 LKFNIATPGREKdeqqetklyskkeyreRKNKDETASAAetadDTAFLYIEALGGKDNITEVTNCATRLRVSVKDETKVE 486 Bacillus subtilis s...
P45604   360 RMFNLKTPGREDkaa-----------dvVTEEANSNTEEgl-tQLATSYIAAVGGTDNLKAIDACITRLRLTVGDSAKVN 427 Klebsiella pneumoniae
AAA24098 420 TRFNLKTPGRDSrv-------------aSSIEKAVAGAPgksgYNVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVN 486 Escherichia coli
P31451    32 LQFNMCTPGREdaevkly---skaeykaSRGQ-TTAAEPkkelDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTL 107 Escherichia coli
P05306    28 TRLRLVMKDESK----------------IDQAQVEELDGvkgaFSSSGQYQIIFGTGLVNKVFDAFSKE-ADIEREEHVN 90  Bacillus subtilis s...
P08470    28 TRLRLVLVDDSL----------------ADQQAIGKVEGvkgcFRNAGQMQIIFGTGVVNKVYAAFTQA-AGISESSKSE 90  Salmonella enterica...
P22825    28 TRLRLAVADEQK----------------IDEQAIDNLEGvkgqFKVAGQYQIIFGSGIVNQVYAEMAKL-TGMSEMSTND 90  Vibrio alginolyticus
P39794    29 TRLRFALIDESK----------------VDQEMLDQIDVvkgsFSTNGQFQVVIGQGTVNKVYAELVKE-TGIGESTKDE 91  Bacillus subtilis s...
P08722    26 TRLRFKLKDESK----------------AQAEVLKKTPGiimvVESGGQFQVVIGN-HVADVFLAVNSV-AGLDEKAQQA 87  Escherichia coli K-12
P24241    30 TRLRFVIKDDAL----------------IDSPTLKTIPGvlgvVRSDNQCQVIIGN-TVSQAFQEVVSllpgdmqpaqpv 92  Escherichia coli K-12
P54715   487 pDSVFRALGAHGVVRN-GKaFQVIIG 511 Bacillus subtilis subsp. subtilis str. 168
P45604   428 -DAACKRLGASGVVKLnKQtIQVIVG 452 Klebsiella pneumoniae
AAA24098 487 -VQALKDNRAIGVVQLnQHnLQVVIG 511 Escherichia coli
P31451   108 dDEVFKKLGAHGVFRS-GDaIQVIIG 132 Escherichia coli
P05306    91 ----HQDAAKEKLNPA-ARfAKTLSN 111 Bacillus subtilis subsp. subtilis str. 168
P08470    91 ----AADIAAKKLNPF-QRiARLLSN 111 Salmonella enterica subsp. enterica serovar Typhimurium
P22825    91 ----VASAGAEKQNIV-QPaVKGLSD 111 Vibrio alginolyticus
P39794    92 ----VKKASEKNMNPL-QRaVKTLAD 112 Bacillus subtilis subsp. subtilis str. 168
P08722    88 ----PEND--DKGNLL-NRfVYVISG 106 Escherichia coli K-12
P24241    93 gkpkltlrrigagildaligtmspli 118 Escherichia coli K-12
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