Conserved Protein Domain Family
sit

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TIGR00811: sit 
silicon transporter
Marine diatoms such as Cylindrotheca fusiformis encode at least six silicon transport protein homologues which exhibit similar size and topology. One characterized member of the family (Sit1) functions in the energy-dependent uptake of either Silicic acid [Si(OH)4] or Silicate [Si(OH)3O-] by a Na+ symport mechanism. The system is found in marine diatoms which make their "glass houses" out of silicon. [Transport and binding proteins, Other]
Statistics
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PSSM-Id: 273281
Aligned: 4 rows
Threshold Bit Score: 1116.58
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAD13807   1 MPSGFQYFQQAYSMCLVIFSVVIVTALMFTDNTKLAKDAHPVAALVIMWLGILWMSMVEGGQCSMVGLPPIDRDLYKESH 80  Cylindrotheca fusif...
AAD13805   1 MPSGFQYFQQAYSMCLVIFSVVIVTALMFTDNTKLAKDAHPVAALVIMWLGILWMSMVEGGQCSMVGLPPIDRDLYKESH 80  Cylindrotheca fusif...
AAC49653   1 MVSVIDGIKQFYSMALVIFSVVIVTALMFTDNTKLAKDAHPVAALVIMWLGILWMSMVEGGQCSMVGLPPIDRDLYKESH 80  Cylindrotheca fusif...
AAD13806   1 MVSVIDGIKQFYSMALVIFSVVIVTALMFTDNTKMAKDAHPVAALVIMWLGILWMSMVEGGQCSMVGLPPIDRELYKESH 80  Cylindrotheca fusif...
AAD13807  81 PTTYKICSLGHKGNNLDRYLMGRQFMVIFINFTINLCGAPLEGAEVLGLPEILTDIFLGSGIAMVLTVVTIGQLTAQVNA 160 Cylindrotheca fusif...
AAD13805  81 PTTYKICSLGHKGNNLDRYLMGRQFMVIFINFTINLCGAPLEGAEVLGLPEILTDIFLGSGIAMVLTVVTIGQLTAQVNA 160 Cylindrotheca fusif...
AAC49653  81 PITYKICSLGHKGNNLDRYLMGRQFMVIFINFTINLCGAPLEGAEVLGLPEILTDIFLGSGIAMVLTVVTIGQLTAQVNA 160 Cylindrotheca fusif...
AAD13806  81 PITYKICSLGHKGNNLDRYLMGRQFLVIFINFTINLCGAPLDGAEVLGLPKVLTDIFLGSGIAMVLIVVPLGQLTAQVNS 160 Cylindrotheca fusif...
AAD13807 161 SHCMLDYINTHFMTFTLYVTLIIEVTGVMHSCYLIRDMFYFAAGKPVETNEPPRNAVQNLFHWGRVVFSLGVLCFALAVT 240 Cylindrotheca fusif...
AAD13805 161 SHCMLDYINTHFMTFTLYVTLIIEVTGVMHSCYLIRDMFYFAAGKPVETNEPPRNAVQNLFHWGRVVFSLGVLCFALAVT 240 Cylindrotheca fusif...
AAC49653 161 SHCMLDYINTHFMTFTLYVTLVIEATGVMHSCYLIRDMFYHAAGKPVETNEPPRSAVQNLFHWGRVVFSLGVLCFALAVT 240 Cylindrotheca fusif...
AAD13806 161 SHCMLDYINTHFMTFTLYITLIIEATGVMHVCYLIRDMFYHAAGKPVESNEPPRSAVQNVFHWGRVAFSLGVLCFALAVT 240 Cylindrotheca fusif...
AAD13807 241 LEALFKGQTTMWEFIPNGVAVVLFVLLMSLVGLLEGMQIAFFAVAKIPKADRGDHPFARKTCELLFKGNGRNLPGFMVGR 320 Cylindrotheca fusif...
AAD13805 241 LEALFKGQTTMWEFIPNGVAVVLFVLLMSLVGLLEGMQIAFFAVAKIPKADRGDHPFARKTCEVLFKGNGRNLPGFMVGR 320 Cylindrotheca fusif...
AAC49653 241 IEALFNGKTTMWEFIPNGVAIVLFILLMSVVGLLEGMQIAFFAVAKIPKAERGDHPFARKTCELLFKGKGRNLPGFMVGR 320 Cylindrotheca fusif...
AAD13806 241 IEALFNGETTMWQSIPNGVAIVLFILLMAVVGLLEGMQIAFFAVAKIPKAERGDHPFARKTCELVFRGNGRNLPGFMVGR 320 Cylindrotheca fusif...
AAD13807 321 QMTVTLCFFIIARVTTLDIEIGVDDNIFGVSDGIQEFFNLGFLGAIITTILASIAWQLVASAFPIAFLSNPVVYIVLRIV 400 Cylindrotheca fusif...
AAD13805 321 QMTVTLCFFIIARVTTLDIEIGVDDNIFGVSDGIQEFFNLGFLGAIITTILASIAWQLVASAFPIAFLSNPVVYIVLRIV 400 Cylindrotheca fusif...
AAC49653 321 QMTVTLCFFIIARVTTLDIEVGVDDNIFGVSDGIQEFFNLGFLGAIITTILASIAWQLVASAFPIAFLSNPIVYIVLRIV 400 Cylindrotheca fusif...
AAD13806 321 QITVTLCFFIIARVTTLDVDVGVDDNIFGVSDGVQEFFNLGFLGAIITTILASIAWQLVASAFPIAFLSNPIVYIMLRIV 400 Cylindrotheca fusif...
AAD13807 401 LLIEATGICAGAWFLGMIHKKVAGFQLDEVYVGTAEERAAGLKPDHSIHAGRDFTMGTNVLSKPpANWEEALANLSpLAE 480 Cylindrotheca fusif...
AAD13805 401 LLIEATGICAGAWFLGMIHKKVAGFQLDEVYVGTAEERAAGQKPDHSVHAGRDFTIGTNVLSKPpANWEEALANLGpVPE 480 Cylindrotheca fusif...
AAC49653 401 LLIEATGICAGAWFLGMIHKKVAGFQLDEVYVGTAEERAAGMKPDHSIHAGREFTMGTNVLNDR-KNWEETIANLS-AKE 478 Cylindrotheca fusif...
AAD13806 401 LLIQSTGICASAWFLGMIHKKIAGFQEDEVYVGTAEERAAGEKPDHSVHPGREFTMGTNVLNDG-RNWDEAIANLS-ALE 478 Cylindrotheca fusif...
AAD13807 481 SFSQRRERILTNIKDMKLLLKNA-TSDDEKNAYEAGIKYELKAMAKLNDEEQEtLSDIDPKMEDI 544 Cylindrotheca fusiformis
AAD13805 481 TFSQRRERILKNIKEMKELMGNA-GTDAEQSAYEAGLAAEVKALQKLNQEESE-AADPTKGVDSV 543 Cylindrotheca fusiformis
AAC49653 479 TFSVRRERMLKNIRELRAMAEEA-SSPEEKATFETAPTMETKALNKLNEEQEK-EATLQKDSSDT 541 Cylindrotheca fusiformis
AAD13806 479 TFSVKLERMLKNIRELREMINSSdISAEERTTFEKALAIEVRALDKLNAEEEE--ATNKSEGKDT 541 Cylindrotheca fusiformis
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