4HF0


Conserved Protein Domain Family
rrf2_super

?
TIGR00738: rrf2_super 
Click on image for an interactive view with Cn3D
Rrf2 family protein
This model represents a superfamily of probable transcriptional regulators. One member, RRF2 of Desulfovibrio vulgaris is an apparent regulatory protein experimentally (MEDLINE:97293189). The N-terminal region appears related to the DNA-binding biotin repressor region of the BirA bifunctional according to results after three rounds of PSI-BLAST with a fairly high stringency. [Unknown function, General]
Statistics
?
PSSM-Id: 273242
Aligned: 20 rows
Threshold Bit Score: 135.452
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4HF0_A         1 MRLTSKGRYAVTAMLDVA-LNSEAGPVPLADISER--QGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVG 77  Escherichia col...
BAA75320       1 MKYSKATNYALHTVLFLA-AATPSKFVGVQQLAER--QEVSPTYLSKILTKLAKAGMIESVSGANGGYRLKRDWEEISFL 77  Bacillus halodu...
AAF12395      14 RMFSQTAEYALRATVMLA-EQGR--ALSAAELARL--SEVPPPYLFKVMGQLVRAGVVTAQRGKNGGYRLGRAAGDITVL 88  Deinococcus rad...
O07465         3 MRLQKSTMCGLYAVLELA-ANPDR-QVSAGDIADK--YDISLNHLAKVLRALVRARLIESVRGPGGGYRFAGNPKRVTLL 78  Rhodopseudomona...
O07573         1 MKLTNYTDYSLRVLIFLA-AERPGELSNIKQIAET--YSISKNHLMKVIYRLGQLGYVETIRGRGGGIRLGMDPEDINIG 77  Bacillus subtil...
P40610         1 MQLTSFTDYALRTLIYLAsLPKDE-LTNITEVTDL--FGVSRNHMVKVINRLGQLGYVHTVRGKNGGIRLMKPASEITVG 77  Vibrio parahaem...
AAA61511       1 MLFTKASEYALLSLIYIS-QK--ETPQDVDSLALE--LDIPKSFLAKILQTLAKDGLLKSFKGAKVGFVLIKEPSQYTIK 75  Campylobacter j...
P71047         1 MKMKSGMEQAVSVLLLLS-RLPVQASLTSEAISQR--LRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLY 77  Bacillus subtil...
AAF11750       1 MRLSATDVYAFQALGFLG-TQDAERWVPSEEISDS--TGIHRPYLVRILAALSAKGIVKSKKGIGGGYALARKPRLISLC 77  Deinococcus rad...
WP_004081299   1 -MFTMRSEYALRLMIVMA-KEYGN-YLSMTEILEKakQSVPREFAEKILYTLKKAGLVKTRRGKSGGYMLSRPPKEIKVS 77  Thermotoga
4HF0_A        78 EVISAVDESVDATRAQGKGGAQG--GDKa-LTHA-LWRDLSDRLTGFLNNITLGELVN 131 Escherichia coli K-12
BAA75320      78 DVIHAIEGTASLFDCDLNHGSEc-------LIQK-VMVSAEEKMEDYLREQKIADLTK 127 Bacillus halodurans
AAF12395      89 EVVNAVDPLPRIRHCPLGKPEH---ERAlcPLHR-QLDETYAQIEATLGSRSLAEMTD 142 Deinococcus radiodurans R1
O07465        79 DIIALFEDTGLDLQEAAS-DDH----EEsrALHK-VLRDIDEIAMTTLRSVSITSLLK 130 Rhodopseudomonas palustris CGA009
O07573        78 EVVRKTEDDFNIVECFDANKNLCv-ISPvcGLKH-VLNEALLAYLAVLDKYTLRDLVK 133 Bacillus subtilis subsp. subtilis str...
P40610        78 GVVRDL-EPLDLVNCGV-EFCHI---TPacRLKD-KLAKAKSAFLAELDECTIESLLS 129 Vibrio parahaemolyticus RIMD 2210633
AAA61511      76 EIVNSAEKKDISVFECSGGTCPNn-KEEncTLMP-MLVNLQNKVDEFLDSITLEDIMK 131 Campylobacter jejuni subsp. jejuni 81...
P71047        78 DVYQAVEGRGSMYQGKGLLQSVFe-GEShcVLET-VMAEIEDKWSNLMREESLQHVMD 133 Bacillus subtilis subsp. subtilis str...
AAF11750      78 EVVRAVDGPVAPLSCISLNWHEPcaEEGrcHARAtVYTRMRDAMLGVLQEFSVEDLVT 135 Deinococcus radiodurans R1
WP_004081299  78 EIVFLLDRKSKVFFDMPG---CP--DELdcVIRA-LWKRVENEIEKILSGVTLEDLVR 129 Thermotoga
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap