Conserved Protein Domain Family
dprA

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TIGR00732: dprA 
DNA protecting protein DprA
Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function. [Cellular processes, DNA transformation]
Statistics
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PSSM-Id: 273238
Aligned: 9 rows
Threshold Bit Score: 252.249
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q10817        65 LELLMRRGGRLITPDDDEWPVLAFAAFSgagararpcghSPLVLWALGPARLDEVa--pRAAAVVGTRAATAYGEHVAAD 142 Mycobacterium t...
P43862        67 LVWSQKEGNHLVNYFSPFYPFLLKQTAS-----------FPPLLFVKGNLTALSQ----RQMAMVGSRYCTTYGEYWAKH 131 Haemophilus inf...
P30852        64 LCWLEQPNHHLIPADSEFYPPQLLATTD-----------YPGALFVEGELHALHS----FQLAVVGSRAHSWYGERWGRL 128 Escherichia col...
P39813        67 LAAYREQGINTIPISSKQYPFWLKSIYD-----------PPAVLFAKGDMTLLSKg---RKIGIVGTRNPTAYGKQVVNH 132 Bacillus subtil...
P73345        71 LEEHQQKNPQFLTPDDPDYPRLLWEIPS-----------PPPVLYYLGRLDHRESqgqiPGVGIVGTRYPTDHGSRWTRK 139 Synechocystis s...
Q44773        61 EKVIQRTKAKVAILGSKSYPNKLKRIYD-----------PPFAIYYKGNLPDCSL----LSWAVVGSRKISKTLAERTRE 125 Borrelia burgdo...
WP_010881841  75 IQTMRCYQIKMVFKDDDAFPSWLREISD-----------VPFVLFYRGTLPCATQ----PIVGMVGTRTPTGEGVRNSLA 139 Treponema pallidum
WP_010880752  72 INIIDKNDIKFILYEDKEYPEILKGIDE-----------PPPYLFYQGEPPEG-------GYGIVGTRRPSKLSLNAVEK 133 Aquifex aeolicus
WP_001076175   1 --MNQRMKSHFQYSTLENIPKAFDILKD-----------PPKKLYCVGDTKLLDTp---LKVAIIGTRRPTPYSKQHTIT 64  Helicobacter py...
Q10817       143 LAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHG-VLFTEYPPGVRPARHRF 221 Mycobacterium t...
P43862       132 FATELSLAGFTITSGLALGIDGHCHQAVVNIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNgALVSEFLPNQAPIAANF 211 Haemophilus inf...
P30852       129 FCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGgALVSEFPLDVPPLAYNF 208 Escherichia col...
P39813       133 LTKEICRKGWVIVSGLASGIDGMSHAASIKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHH-ILLSEHPPETKPQKWHF 211 Bacillus subtil...
P73345       140 ISQALVKSGFTIVSGLAAGIDADAHSSCLRVNGRTIAVLGTGLDLIYPPQNRQLFEQIAAEG-LILSEYPVGSKPERGNF 218 Synechocystis s...
Q44773       126 FSSHLAKNGVEIISGFAIGADIEAHIAAINENKRTFAVIPTDIDNIYPRQNRKYVSKLLEQGgGIITETLPFDKIQNYFF 205 Borrelia burgdo...
WP_010881841 140 FSKACAESGIAIVSGLARGIDGFCHKGALAGGGYTLAVLACGVDQLYPRSNSALAARIIETGgCILSEYAPSEHVMRYRF 219 Treponema pallidum
WP_010880752 134 LLESIEGP---IISGGAVGIDFKAHFESLKHGFKNFVILGTGILKIESR-----IKKLKGMGaSLVSEFLPWTEGSKWTF 205 Aquifex aeolicus
WP_001076175  65 LARELAKNGAVIVSGGALGVDIIAQENALP---KTIMLSPCSLDFIYPTNNHKVIQEIAQNG-LILSEYEKDFMPIKGSF 140 Helicobacter py...
Q10817       222 LTRNRLVAAVARAAVVVEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRA---DDIVEFV 296 Mycobacterium tub...
P43862       212 PRRNRIISGLSVGTLVVEATEKSGSLITARYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENA---KDILETL 286 Haemophilus influ...
P30852       209 PRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP---EEILENL 283 Escherichia coli ...
P39813       212 PMRNRIISGLSEGVIVVQGKEKSGSLITAYQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSA---EDIFEEL 286 Bacillus subtilis...
P73345       219 PARNRIIAGLSRAVLVMEAPPKSGALITAKYANEFNRDVFSLPNSPDVQEAHGCLNLIHNGAEVILSE---NQLLASL 293 Synechocystis sp....
Q44773       206 AKRNRLVSGLSDAIFITYAPLKSGALITAELGLDLGLDVYVYDLDFCG---DGAVKLHDFGAQEIKTV---KDLYALL 277 Borrelia burgdorf...
WP_010881841 220 PERNRLISGLARSLVVMEAPKKSGALITALCALEQGRDVYVYEPLLESLQNEGGRLLHAEGARALTCV---QDMFDDW 294 Treponema pallidum
WP_010880752 206 PKRNRIIAGLSKKLFVMEAGSKSGALITADYAHRYGREIYAYVGDEHSERWKGCLKLIEEGKAKRLDFsseKDKLLEF 283 Aquifex aeolicus
WP_001076175 141 LARNRLVIALSDVVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLN--ESDGTNELLEKGQAQGIFNi--QNFINTL 214 Helicobacter pylori
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