Conserved Protein Domain Family
sda_beta

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TIGR00719: sda_beta 
L-serine dehydratase, iron-sulfur-dependent, beta subunit
This enzyme is also called serine deaminase. This model describes the beta chain of an iron-sulfur-dependent L-serine dehydratase, as in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of beta chains from the homologous region of single chain forms such as found in E. coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis]
Statistics
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PSSM-Id: 129802
View PSSM: TIGR00719
Aligned: 2 rows
Threshold Bit Score: 338.826
Threshold Setting Gi: 6094257
Created: 7-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P33074   1 MTDYSAFEVMGPIMVGPSSSHTAGACKIANVATSIVSNNYNQVEFQLHGSFAHTFKGHGTDRALVGGILGFEPDDDRIKT 80  Peptoniphilus asaccha...
O34635   1 MKYRSVFDIIGPVMIGPSSSHTAGAARIGRVARSLFGREPERIIVSFYGSFAETYKGHGTDVAIIGGLLDFDTFDERIKT 80  Bacillus subtilis sub...
P33074  81 SFELAKQAGLNYIFTTTNLGDnYHPNSVKIVFSYPNGEeEYVIGSSIGGGAMKIVNINGIAIEFRGEYSTILLEYPEQRG 160 Peptoniphilus asaccha...
O34635  81 AIQIAEAKGIDIEFRVEDAVP-VHPNTAKITISDEKGE-LELTGISIGGGKIEITELNGFELRLSGNHPAILVVHNDKFG 158 Bacillus subtilis sub...
P33074 161 VISYVSSLLTGSEYNIESLNTKKNKLTNIVTLTVEIDKPLTESLKSAI 208 Peptoniphilus asaccharolyticus
O34635 159 TIAGVANVLAKFSINVGHMEVARKDIGQLALMTIEVDQNIDDHILDEL 206 Bacillus subtilis subsp. subtilis str. 168
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