Conserved Protein Domain Family
recB

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TIGR00609: recB 
exodeoxyribonuclease V, beta subunit
The RecBCD holoenzyme is a multifunctional nuclease with potent ATP-dependent exodeoxyribonuclease activity. Ejection of RecD, as occurs at chi recombinational hotspots, cripples exonuclease activity in favor of recombinagenic helicase activity. All proteins in this family for which functions are known are DNA-DNA helicases that are used as part of an exonuclease-helicase complex (made up of RecBCD homologs) that function to generate substrates for the initiation of recombination and recombinational repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Statistics
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PSSM-Id: 273172
Aligned: 9 rows
Threshold Bit Score: 1033.15
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9Z7G7          6 IFDSNSSIqGKFFLEASAGTGKTFTIEQIVLRALIEGs-------LTHVEHALAITFTNASTNELKVRIKDNLAQTLREL 78   Chlamydia pne...
P96920          7 LGPLPREG-TTTVLEASAGTGKTFALAGLVTRYLAET--------AATLDEMLLITFNRAASRELRERVRGQIVEAVGAL 77   Mycobacterium...
O51578          3 KILEKIQNnTTILIEASAGTGKTHILENVVINLIKTK--------LYSINEILVLTFTKKATEEMHTRILKVIENAYSNS 74   Borrelia burg...
WP_000827574   11 LDPLRLPFqGERLIEASAGTGKTFTIAALYLRLLLGLggsaafprPLTVEELLVVTFTEAATAELRGRIRSNIHELRIAC 90   Escherichia coli
WP_003115861   10 LDPLDFPLhGSRLIEASAGTGKTFTIALLYVRLVLDHggenafgrPLSPPEILVVTFTDAATQELRERIRSRLGEAARCF 89   Pseudomonas a...
WP_002246097    8 FDPLTVPIsGTNLIEASAGTGKTYGIAALFTRLIVLE--------QKNVERVLVVTFTKAATAELKTRLRGRLDDVLQVL 79   Neisseria men...
WP_010896126   10 LNIFKIPLnGIKLIEASAGTGKTFTIVLLYLRLLLGIgekkiykkKLLVHEILVVTFTNKAKEELYIRIKDGIQNMYLTC 89   Buchnera aphi...
WP_010906702    7 LNPVTLPLnKVCLIEASAGTGKTYTIGSLYLRLLLQAgens-fsqPLTVEQILVVTFTEAATEELKGRIRERIHQAKKAL 85   Pasteurella m...
WP_010229088    6 IFSPTTSVsGKFFLEASAGTGKTFTIEQVILRSLLEGn-------VEQTKNILVVTFTNAATNELKLRIQESLKQALTLF 78   Chlamydia mur...
Q9Z7G7         79 KA----------------------VLNSQPASLPTYLDIN-CNVKqIYMQVRNALATLDQMSLFTIHGFCNFVLEQYFPK 135  Chlamydia pne...
P96920         78 QGd---------------------APPSGELVEHLLRGSDaERAQ-KRSRLRDALANFDAATIATTHEFCGSVLKSLGVA 135  Mycobacterium...
O51578         75 KTn-----------------------------EILKEAYEqSKKLfISTINKFALHALNNFQIETENYSKYKPKEKFSKE 125  Borrelia burg...
WP_000827574   91 LR----------------------ETTDNPLYERLLEEIDdKAq--AAKWLLLAERQMDEAAVFTIHGFCQRMLNLNAFE 146  Escherichia coli
WP_003115861   90 AEp---------------------QERHDGLLVALRQQYPtERWPgCARLLRLAAEWMDEAAVSTIHSWCYRMLREHAFD 148  Pseudomonas a...
WP_002246097   80 ESkgiaklgddtlsdgiaaycaehHEGDTFLPELLKQALQkEGRTrLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFL 159  Neisseria men...
WP_010896126   90 IN----------------------KTTSDSSFQFFFKEIHdIKE--AIYVLKRAQNDMNSSSIYTIHSFCQHILQLHTFH 145  Buchnera aphi...
WP_010906702   86 IAyqe-----------------qgEQALQDDPFLLACLASiSDLDlAIQRLTIAEQTMDLAAIYTIHGFCRRMLMQYAFH 148  Pasteurella m...
WP_010229088   79 SQ----------------------ALSHPETPLPPYVSSQeTKVKqLYIKIRNSLATLDEMNIFTIHGFCRFTLEQHFPW 136  Chlamydia mur...
Q9Z7G7        136 TRLIHKNPALTHSQLVLHHITNYLKQDLWKNVLFQEQFHLLAVRYNVTSKHTSSLVDKLlasytqpissyfssRVerleq 215  Chlamydia pne...
P96920        136 GDNAADVELKESLTDLVTEIVDDRYLANFGRQETDPELTYAEALALALAVVDDPCAQLR--------------PP----- 196  Mycobacterium...
O51578        126 IDEIVYDFLRKSDSLIQALDIKDYELKVFKSDAKKTEEIVLKIKKAYERDTTQELGDWLktqt------afenILlkkee 199  Borrelia burg...
WP_000827574  147 SGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQgeap------vikaPPpddet 220  Escherichia coli
WP_003115861  149 SGSLFTQNLETDQSELLAEVVRDYWRRNFYGLTAPAAQAVASCYSGPEALGKALQPLLArqdadfryadqalsAPeslaa 228  Pseudomonas a...
WP_002246097  160 CQAPFDVEMTEEDGDRLLIPAQDFWRERVSNDP-VLAALALKRKAVPQTVLAQISRYLSrpyl------nfrrPQadlkq 232  Neisseria men...
WP_010896126  146 FNDIFEEKIIENEDNLYLQATQDFWRRFFYTLPEDIIKIIYQDYKSPDHLLKTIKPFFYiksi------nfptKIlnnkk 219  Buchnera aphi...
WP_010906702  149 SRVHFNLTLNKDETALLERLFKAFWREHFYSQPFLVANYIHQTLGSPQAVFSELRQYIAqdlqvepayqawlaMPlqdfl 228  Pasteurella m...
WP_010229088  137 VQPIHPSSMFSEPQTIQQYILDYLRQNSWENVLSPKQYAFLSYHHRATTQQTRHLADRLlqdyastpnlalppLSitlqk 216  Chlamydia mur...
Q9Z7G7        216 islwhqqiynslleiPkqvfldqltahisgfkkqpfsilddlhhfvdll-----------------ytsethsslfsffk 278  Chlamydia pne...
P96920        197 ---------------D---------------------------------------------------------------- 197  Mycobacterium...
O51578        200 likdynkiiedldkmTkdeilsfynkhiqtgkleieyskendifkiaetllkn----------kffstlieketkknskl 269  Borrelia burg...
WP_000827574  221 lasrhaqivaridtvKqqwrdavgeldaliessgidrrkfnrsnqakwidkis----------awaeeernsyqlpesle 290  Escherichia coli
WP_003115861  229 lleqggdwyrqldqlDaqaraawraarveleallrdlrpylngnsyrgkdsdetf------dawlqaladwseggeqpan 302  Pseudomonas a...
WP_002246097  233 aqrnaetswqticrlLpeleagfwrihpdlngnsyrknsfgnlfkelaqks-------------aagqlpfldkdthdrl 299  Neisseria men...
WP_010896126  220 limyheenikkiiffKemwliyhkiiqktindleinkkiyskfnlikwinki-----------tewaksetkdytipsil 288  Buchnera aphi...
WP_010906702  229 qqhiapqqqniqqlkQqwlaqeaeiqalilaelektypkgekkrlkrttfkkpnvlnwfkvihewatsplvsglndklsk 308  Pasteurella m...
WP_010229088  217 vknws-sqykhlsplSleelqdfslrfkqsdlpidrelpdfvkqfet----------------------dpnsldilffp 273  Chlamydia mur...
Q9Z7G7        279 iaetfnfkhrlarykpcaaFtvle--nmswVErtl-------efCNLDRIFNTLLVDLQEYLKQNYTPW--LSPDESVFA 347  Chlamydia pne...
P96920        198 -------------------P----------EP------------GSKAAVRLRFAAEVLEELERRKGRLraQGFNDLLIR 236  Mycobacterium...
O51578        270 spkelkikndliclginikHekyksednrnKNrnn------lkqYVILKVEYKILKYIEKELKKTIKSTntIDQNYIISN 343  Borrelia burg...
WP_000827574  291 kfsqrfledrtkaggetprHplfeaidqllAEp----------lSIRDLVITRALAEIRETVAREKRRRgeLGFDDMLSR 360  Escherichia coli
WP_003115861  303 lgkfgqtrikltakrvapeHaalraidawaAHqee-------rpDLAPHLLLHALGEVGHELEIEKQRRaeIGFDDLLSR 375  Pseudomonas a...
WP_002246097  300 lklasdkleaglkkgktpdAavfaelqklaDFgrdlnaleeaeeATMIRLQLDLIEYLNRSLAEMKKSRreRGFDDLLLD 379  Neisseria men...
WP_010896126  289 kyftkkniekntinntcskYiifeesekilKKk----------fSLKNVIIIYAVKKIHQFLLKEKKKKslIGFNDLLSI 358  Buchnera aphi...
WP_010906702  309 yfsqsalntyaeegatplsHpvfalveevnAQldv-------qpFYAKLLRYYYLRGVQQTLIAYKAQHteKNFDDLLRL 381  Pasteurella m...
WP_010229088  274 gmvqkfqeenrnkkklgppFspldpflkdwLLiaq-------pfCQKEPIFHTLLKSVQQHLKTYCAQS--YSHDESIAT 344  Chlamydia mur...
Q9Z7G7        348 LEKLLSS-SEAQpVVQALREQYQLVLIDEFQDTDKQQWSIFSNLFISPKft-------gSLFLIGDPKQSIYEWRSADLP 419  Chlamydia pne...
P96920        237 LATALEA-ADSP-ARDRMRERWRIVLVDEFQDTDPMQWRVLERAFSRHS----------ALILIGDPKQAIYGFRGGDIH 304  Mycobacterium...
O51578        344 LKNYLKS--EDKkLLNAIKNRYKIILIDEAQDLSLIQIEIFKILKTAGi----------KLIFIADPKQIIYSFRKADIS 411  Borrelia burg...
WP_000827574  361 LDSALRS-ESGEvLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPe--------tALLLIGDPKQAIYAFRGADIF 431  Escherichia coli
WP_003115861  376 LDRALQG-PGGErLAQLIREQFPVALIDEFQDTDPVQYRIFERIYRIAAdpdepqaretGLFMIGDPKQAIYAFRGADIH 454  Pseudomonas a...
WP_002246097  380 VHTALTDnPHADtLARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNr---------PLFLVGDPKQAIYSFRGADIY 450  Neisseria men...
WP_010896126  359 LLKTIKK-EKf--LKDLIIKKYPAAFIDEFQDTDIQQYKIFNLLYKKNKt--------tVLFLIGDPKQAIYSFRGADIF 427  Buchnera aphi...
WP_010906702  382 LRDALYS-AQGEeLAQFIRVQYPFAMIDEFQDTDAQQYHIFSKIYLHQQtt------enGFIMIGDPKQAIYKFRGADIF 454  Pasteurella m...
WP_010229088  345 LESLLAQ-N--DhVVSQLRKQFQLVLIDEFQDTDKRQWKIFSKLFASPDys-------gSLFLIGDPKQSIYEWRNADLP 414  Chlamydia mur...
Q9Z7G7        420 TY-LTAKSSFSedKQLQLVNNYRSTPKLMEAINQIFGKISpfle------------ipgYLPIEYHALnpQSSETFENPP 486  Chlamydia pne...
P96920        305 TY-LKAAGTAD--ARYTLGVNWRSDRALVESLQTVLRDATlg---------------haDIVVRGTDAhhAGHRLASAPR 366  Mycobacterium...
O51578        412 FYnKEIKNKINtdARIVLKINHRSSKKLIGPLNKIFNNIYnnaiad-------eiekidFTNSLPNQKndNNKIVINGQE 484  Borrelia burg...
WP_000827574  432 TY-MKARSEVH--AHYTLDTNWRSAPGMVNSVNKLFSQTDdafmf----------reipFIPVKSAGKnqALRFVFKGET 498  Escherichia coli
WP_003115861  455 TY-LRAREATRg-RHYTLGKNFRSTAAMVAAANRCFAFAEehprgafrfareglenpvpFHAVDAQGR--AERLLIDGAE 530  Pseudomonas a...
WP_002246097  451 AY-LQAAEDAR--HRYTLATNYRSHAALIGSIGALFRLKErpfvl----------enigYSEVGAARAesRLSPERPAVQ 517  Neisseria men...
WP_010896126  428 SY-LYAKSKIK--KYYYLDTNWRSSINICKSINFLFSQNInpfif----------knipYIPVVPSSKnlKMNFTINDVA 494  Buchnera aphi...
WP_010906702  455 TY-FQAAEQAD--ARFTLGTNWRSEQRLVNAVNSLFQFEQglpfl---------ypqiqFLPVAACQN--KPTFWLNGQQ 520  Pasteurella m...
WP_010229088  415 TY-LQAKNSFPkeSQLILDTNYRSTPQLMQALNHLFSLPSpfl--------------etpQTILYHPLqsKGSASTSYSE 479  Chlamydia mur...
Q9Z7G7        487 HAPIHFFFYE----------------------TIKDQALWIFSEALRLQKE------------QKIPLGNMVVLVS---D 529  Chlamydia pne...
P96920        367 PAPFRLRVVKrhtlgydg------tahvpieaLRRHIPDDLAADVAALLASgat------fagRPVVAADIAVIVEhhkD 434  Mycobacterium...
O51578        485 IEGINIITTNtesee------------diyqkTALTIKYLLAYGKIAENNKi-----------RNIKMQDIKVLCRgknE 541  Borrelia burg...
WP_000827574  499 QPAMKMWLMEgescgvgd------yqstmaqvSAAQIRDWLQAGQRGEALLmng------ddaRPVRASDISVLVRsrqE 566  Escherichia coli
WP_003115861  531 APAMTFWNLDveagvlgsa----ayrqemaerSASAIRRWLSLADLGRAGFadeq-----ggwRALRPADIAILVRgraE 601  Pseudomonas a...
WP_002246097  518 VRWLHENDNEkankdvl--------rrraadyCADEIAHALNEAARGRLNFk----------gCPLQSGDIAVLVRthnE 579  Neisseria men...
WP_010896126  495 QTPISFFLQEekevsidd------yqvwiskqCANEISFWLTCAKTGKAKIttk------ngeKILTANDIAILVRnrkE 562  Buchnera aphi...
WP_010906702  521 EPPFRCYVGDvgvakknsgnltsaqkqtlatiCARSIQQWLQSAVQHDAIFysaeakqeeekrQPLRAEKIAVLVKdwkE 600  Pasteurella m...
WP_010229088  480 FRPIHFFTTQ----------------------DSQEEALWISKTASYLRST------------FAIPFGNMAVLVQ---D 522  Chlamydia mur...
Q9Z7G7        530 SNQAFELISYATIPVSFSKNKSiFHLTETHILTTALLEAILHPENYEKISKILFSSLFGLSLDEVTTKK----------- 598  Chlamydia pne...
P96920        435 ARACRNALAEAGIPAIYTGDTD-VFASQAAKDWLCLLEAFDAPQRSGLVRAAACTMFFGETAESLAAEGda--------- 504  Mycobacterium...
O51578        542 INLIDKALKKEQIQTNKTQEK--FLKTKEFSEIFYIIKCLDRKQSFKTLNYILSSKILNVPWNLQRILIkqdkiclieef 619  Borrelia burg...
WP_000827574  567 AAQVRDALTLLEIPSVYLSNRDsVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNnde-------- 638  Escherichia coli
WP_003115861  602 AEAIRSALAARRLASVYLSDRDsVFDSQEAADLLHWLRACADPGADALLRVALATRSLHLDWATLERLNqde-------- 673  Pseudomonas a...
WP_002246097  580 AVMVSAALKKRQVQSVLLSRES-VFASPEAAALSALIGFWLEPRRAGTLRFVLTSSIFGYNAQQLHDFNqne-------- 650  Neisseria men...
WP_010896126  563 ADLIQDELEKLNIISIYSSNKNsVFQTLDAQELLWILESILEPENEILLQQSMASHILKKLSLVVENKTisn-------- 634  Buchnera aphi...
WP_010906702  601 ASFVSEALQKVGIASVYLSDKSnVFDCHEAQELALILTACLHPFSERNILNAIATRIFALTTREISEIKqde-------- 672  Pasteurella m...
WP_010229088  523 YPQALKLITHSTIPMAYCKEKRiFDRTESPYLLILLLEALLYPENQQKIQAILLSRFFHLSATDIHQHL----------- 591  Chlamydia mur...
Q9Z7G7        599 ---------------EDFTIYFQSLHSYISHHGLLATFYRVMt------tQGNVLFSSPRGDLIFQEMEKLCGYLDTISS 657  Chlamydia pne...
P96920        505 -------------ltDRVAGTLREWADHARHRGVAAVFQAAQla-----gMGRRVLSQRGGERDLTDLAHIAQLLHEAAH 566  Mycobacterium...
O51578        620 ieniivllekneitlINAINKITFEKNLWIKIANITKDQKIIewak-nkiNYKGLLIKEGKLENLKTYETTLEIISKIYH 698  Borrelia burg...
WP_000827574  639 ------------hawDAVVEEFDGYRQIWRKRGVMPMMRALMsa----rnIAENLLATAGGERRLTDILHISELLQEAGT 702  Escherichia coli
WP_003115861  674 ------------lfwERMVLRFRDYRRSWQAQGVLPMLRRLLad----feLPARLLRHADGERSLTNLLHLAEWLQRAAV 737  Pseudomonas a...
WP_002246097  651 ------------seiLHWAESARTALDNWNQYGIFAAMQQFSqt----hgIETRLLSRNNG-RSLTNYFQLLELLAAEDA 713  Neisseria men...
WP_010896126  635 ------------knsYFIIEKLYEYHDIWEKIGVFQMIKIMIle----yqKNSFCTEINENHIKNLNFLHIGELLQEQFQ 698  Buchnera aphi...
WP_010906702  673 ------------qrwTQVVERFVNYQRIWQWQGILVMLHRLFld----ekIMEKLLSQVGGERQTTDLLHLAELLQEAST 736  Pasteurella m...
WP_010229088  592 ---------------KIFSSLFFMLNTYLHQYSLLATFYKLMgetvfsqtIGETLLQTPLGDIIFQELEELCLYLDKTTE 656  Chlamydia mur...
Q9Z7G7        658 YPYHQLLHLKNFSETGRWEEEl----AISSYSEDLETLKITTIHSSKGLEYDIVFCPGIEKSKKN--------------- 718  Chlamydia pne...
P96920        567 RERLGLPGLRDWLRRQAKAGAgp-peHNRRLDSDAAAVQIMTVFVAKGLQFPIVYLPFAFNRNVRsddillyhddgtrcl 645  Mycobacterium...
O51578        699 KEQNIQSLISTLESLIINEEPeeieeKINNINNDNESIELMTIHKSKGLGMNIVFLLNTTPIENSnffskknqfykfyqd 778  Borrelia burg...
WP_000827574  703 QLESEHALVRWLSQHILEPDSna-ssQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQdqafyhdrhsfeavl 781  Escherichia coli
WP_003115861  738 ELDGEHALIRHLAEQVQSPGSe----EILRLESDADLIKVVTIHKSKGLEYPLVLLPFICSWRELdgnsgapasfhedga 813  Pseudomonas a...
WP_002246097  714 QNRNPAALHKWLRDQISLAGNnsgdnRAIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTgpsdwqilhqsanrt 793  Neisseria men...
WP_010896126  699 FFHKKISLIRWFQKKISTKTQpe-ynESIKCFDESPSIKIITIHKSKGLEYPIVWIPFSIDFKKStlaiyhdqkslktff 777  Buchnera aphi...
WP_010906702  737 LNESAASLLRWFEKQIQGENRqe--eQQIRLESERQLVKIVTIHKSKGLEYDLVWLPFIADAPKpnralldtyyhhekqq 814  Pasteurella m...
WP_010229088  657 NPHHKLFHLINILDTGKYDEEl----SFSSQSNDDNVLKITTVHSSKGLEYDVVFCSSLNKVKE---------------- 716  Chlamydia mur...
Q9Z7G7        719 -----------------------KSSSELLREMYVACTRAKKQLYLPIS---TQPPSLQrssALTN--------YVKLEG 764  Chlamydia pne...
P96920        646 yig---gkdggaqrrtveglnrvEAAHDNLRLTYVALTRAQSQVVAWWAptfDEVNGGLsrlLRGRrp----gqSQVPDR 718  Mycobacterium...
O51578        779 gk----ieydffkleenkkyarlKILSEEKNIFYVGATRAKFALFIIKInsiTSKLLEIakiFTIDd--------IKHDF 846  Borrelia burg...
WP_000827574  782 ---------dlnaapesvdlaevERLAEDLRLLYVALTRSVWHCSLGVAplvRRRGDKKgdtDVHQsa----lgRLLQKG 848  Escherichia coli
WP_003115861  814 agrvielarrkeqaarayeqandERLGEDMRLLYVALTRARHSVWLGIAplvASNSKSP---ELHKga----lgYLLAGG 886  Pseudomonas a...
WP_002246097  794 el-----lakaqlsedeqkqyadEEMAERLRLLYVALTRAEEQLNIYAAyssDTADNPLaylIEGLpqdsretvRQTYAQ 868  Neisseria men...
WP_010896126  778 ---------denysnkflkiadeERLAEDIRFLYVALTRSILHCSIGLAcliKKIIKNRnnsDIHQsg----lgFTIQGG 844  Buchnera aphi...
WP_010906702  815 --------vlwdlnethqteieqEQRAEAMRLFYVALTRAKYQVVMALPetfVSHWNCLqyvLTQG--------AMTQTD 878  Pasteurella m...
WP_010229088  717 -----------------------KSPSVHMREMYVACTRAKKFLFIPFSsieKRLQSNKkvsALAN--------YANIT- 764  Chlamydia mur...
Q9Z7G7        765 TQSsAYDLAIHLHQEH---PDLFSYSLPKDHGHATTVLN------LPLLETFALKVTPPKTIFSFSSTKFL--------- 826  Chlamydia pne...
P96920        719 CTP-RVTDEQAWAVFAqweAAGGPSVEESVIGARSSLEKpvp-vpGFEVRHFHRRIDTTWRRTSYSDLVRG--------- 787  Mycobacterium...
O51578        847 NIHeFIGQKR-FNKKKyntNVNTKLIPPKPIIKNMFKKEytssfsSLTAQAHHKEFYENYDFKNINYEKET--------- 916  Borrelia burg...
WP_000827574  849 EPQdAAGLRTCIEALCd--DD-IAWQTAQTGDNQPWQVNdal-taELNARTLQRLPGDNWRVTSYSGLQQR--------- 915  Escherichia coli
WP_003115861  887 ATIgSDGLGQCLAALRg-eCREIVVEPAPEADAERYVAGrg--qgLGQARETRRSSREKWWVASYSGLQLQasaglddde 963  Pseudomonas a...
WP_002246097  869 EKDgITMLKQNWRRVAdnaPAGTDFAFTENAPPPAAYRSnagqtaEFAANSIPERRFRFVRHTSFTALSRH--------- 939  Neisseria men...
WP_010896126  845 KTMnYEGLLEKLKKLSi--NNFIEVKNNTDNFSFSRKPQtis-liCKNKFLNKKNIRNTWSITSFSQLNKI--------- 912  Buchnera aphi...
WP_010906702  879 VRAaLTAFQQRVVYPDv--KIQVEEFEALPIHLSTSIKEnsa-dqVLQCAEFHGNIERNWQVTSFSAISAL--------- 946  Pasteurella m...
WP_010229088  765 QHDnIPHLVETLTASH---PEFFSSGTQPPESNISIFSEp-----LPEQEFFSLPILSSQPIYSFSSTTES--------- 827  Chlamydia mur...
Q9Z7G7        827 --LD--------THKDS----------QSIPYSKLPIS-----------KQ----------------QLPLGEKTGILIH 859  Chlamydia pne...
P96920        788 --SEav-----tVTSEPaa------ggRADEVEIAVVA-----------APgsgadl-----tsplaALPSGASFGSLVH 838  Mycobacterium...
O51578        917 --E------------------------LDYEPGLEET-------------------------------LPKGKDIGNILH 939  Borrelia burg...
WP_000827574  916 --GHg-------IAQDLmp-------rLDVDAA-GVVSvvee---ptltPH----------------QFPRGASPGTFLH 959  Escherichia coli
WP_003115861  964 vlESd-------ESQEPisae---eatFHEEGRSAEQPpvahasemrddLH----------------RFPRGPAPGTFLH 1017 Pseudomonas a...
WP_002246097  940 --TQtp-----dGGEEDac------psLDAAETSVAAM-----------PSetptas----dgisihDFPKGTQAGLCLH 991  Neisseria men...
WP_010896126  913 --N---------KLSKHh--------qKEVALKELCIK-----------NQekknqs-----lltihNFPKGKKTGLMIH 957  Buchnera aphi...
WP_010906702  947 --HEktmqlltqAEEEKtpdvsflldhKDYDVSLGRNV-----------ALvpvaemagyskgytpfDFPAGTMVGKVLH 1013 Pasteurella m...
WP_010229088  828 --QY--------FTEPF----------QEISSSSL---------------------------------FPGGSLTGTLIH 854  Chlamydia mur...
Q9Z7G7        860 KILESIQFS----LLQDTEYLMSTIMRFIKHTHLEg-FEETILKLLSKTFFSPLTfsSQTFSLSQVLPNKIFRETSFLFL 934  Chlamydia pne...
P96920        839 AVLETADPAap-dLAAELEAQVRRHAPWWTVDVDHaqLAPELARALLPMHDTPLGpaAAALTLRQIGVRDRLRELDFEMP 917  Mycobacterium...
O51578        940 AAMEEIIFStakdTFDNFKKNNIEIIEKQIQKINSnlNTIEIQNSLAKMIYNILTynIRAINTRLCDIEELQKEMEFLIK 1019 Borrelia burg...
WP_000827574  960 SLFEDLNFT----QPVDP----NWVQEKLELGGFEsqWEPVLTEWITAVLQAPLN--ETGVSLSQLSDRDKQVEMEFYLP 1029 Escherichia coli
WP_003115861 1018 GLLEWAGREgfdvARADAQRRRELVARRCDLRGWKd-WAEPLDLWLEQYLAEPLr--WPGGETSLAGLVAYQVEMEFWFA 1094 Pseudomonas a...
WP_002246097  992 EILEDFKFG----QAAAG--QETLIADKLKKYGFEemWLPAVAEMAEACQKTPLTg---AYCLSDIPPECRCPEMGFTLH 1062 Neisseria men...
WP_010896126  958 YILKNLHVLk----NKNS----NWFSCILEKYNIHikWTSVLIYWIKNIINTPLN--DEKIILSRIDEKSSIRELEFFFP 1027 Buchnera aphi...
WP_010906702 1014 RYFEKFPLD----QPVDR----AAVAQMCQALQLEetWLEPLQTWLTTILNTPLLr-EHPVTLSALSAQDCIKEMEFYLK 1084 Pasteurella m...
WP_010229088  855 KLLESLSGN----FNASLEEITHKAQTLLKNTILEg-FESIISEKIYTAFSTKLPfvSGSFALKDVHPYNIRVEETFLLQ 929  Chlamydia mur...
Q9Z7G7        935 En----------------------------------------------Q-ELWQGVIDLFFEHEG-KYYIIDWKTSFLGE 966  Chlamydia pne...
P96920        918 LaggdlrgrspdvsladvgellashlpgddplspyadrlgsaglgdqpLrGYLAGSIDVVLRLPGqRYLVVDYKTNHLGD 997  Mycobacterium...
O51578       1020 Inpefqkqkylf-------------------------dkhfedlhiklSdGYLKGIVDLIFKANN-KIYILDYKTNYLGK 1073 Borrelia burg...
WP_000827574 1030 Isepliasqldalirq-----------------fdplsagcpplefmqArGMLKGFIDLVFRHEG-RYYLLDYKSNWLGE 1091 Escherichia coli
WP_003115861 1095 Thqvqaeaidalvrrh------------------tlggaarpalaptlLnGMFKGFVDLVFEHQG-RFYVADYKSNWLGA 1155 Pseudomonas a...
WP_002246097 1063 Tedfglkrlrdwfarddi-------------rlpevcraaaetldfhtVnGFLNGFIDMVCQDPEgNICVIDYKSNHLGA 1129 Neisseria men...
WP_010896126 1028 Iknmlystelnkiiqs-----------------inptsitspqlsfnpVkGMLTGFVDLVFIWKK-KYYILDYKSNWLGK 1089 Buchnera aphi...
WP_010906702 1085 Fehefqahkfnqllqky----------------rfisaplqlhtlkqgIkGLLRGFIDLVFRYDG-QYYLLDYKSNKLGT 1147 Pasteurella m...
WP_010229088  930 En----------------------------------------------G-ELWQGIVDLFFEHNN-RFFIIDWKTSFLGD 961  Chlamydia mur...
Q9Z7G7        967 TNSDYSKSNLSIYIKQEKLDYQGRIYVKAVRKFLNQFEIDDDVELGV-----IFIRGIDT--------Q-GNGFFALNSS 1032 Chlamydia pne...
P96920        998 TAADYGFERLTEAMLHSDYPLQALLYVVVLHRFLRWRQRDYAPARHLggvlyLFVRGMCGaatpvtagH-PAGVFTWNPP 1076 Mycobacterium...
O51578       1074 NKEDYNITNLENTIKKEYYDLQYKIYALGIKKILFKNKK--EYNQKFggiiyLFTRAFEDnieclkskF-ENGIYFNLPK 1150 Borrelia burg...
WP_000827574 1092 DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFggviyLFLRGVDKe-------HpQQGIYTTRPN 1164 Escherichia coli
WP_003115861 1156 DDGAYSPEAMTAAVLENRYDLQYVLYLLALHRQLKARLPDYDYDRHMggavyLFLRGTRAa---------TQGLHFERPP 1226 Pseudomonas a...
WP_002246097 1130 DASAYTRQAMDEAVAHHHYYLQALIYAVASARYFKLRGQPPAAVSVRy----LFLRGIDG--------K-GGGVWHWDID 1196 Neisseria men...
WP_010896126 1090 NNNFYSSIHINKEIVKKRYHLQYQIYTIAIHKYLQKKLKNYNYKDDFggvfyFFLRAIDCp------kK-NNGIFYTMPN 1162 Buchnera aphi...
WP_010906702 1148 SPSDYAPAHLQQVMLEQHYDWQYLFYTLALHRYLTLRDPHYQYATHFggvlyTFLRGMNGk-------D-QQGISFHKPD 1219 Pasteurella m...
WP_010229088  962 EPSLYSPDKLLLYIQRQGLDKQGVLYKRAAKKFLHQFNSSLQIEMAF-----VFIRGIDD--------K-GNGFLQPSP- 1026 Chlamydia mur...
Q9Z7G7       1033 EDIPNFNPKAI 1043 Chlamydia pneumoniae
P96920       1077 TALVVALSDLL 1087 Mycobacterium tuberculosis
O51578       1151 FNDVDLDKIIL 1161 Borrelia burgdorferi B31
WP_000827574 1165 AGLIDLMDEMF 1175 Escherichia coli
WP_003115861 1227 RELIERLDALF 1237 Pseudomonas aeruginosa
WP_002246097 1197 AAALEQIK--- 1204 Neisseria meningitidis
WP_010896126 1163 YSLIKKTMTLI 1173 Buchnera aphidicola
WP_010906702 1220 ANLIQELEELF 1230 Pasteurella multocida
WP_010229088      -----------      Chlamydia muridarum
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