Conserved Protein Domain Family
nadB

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TIGR00551: nadB 
L-aspartate oxidase
L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Statistics
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PSSM-Id: 273131
Aligned: 5 rows
Threshold Bit Score: 668.044
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P74562         4 NQFDVVVVGSGAAGLYACLCLPGHYR-VALVTKA-ELKTGASDWAQGGIAAAIAPTD-SPQSHYEDTLAAGAGLCDGEAV 80  Synechocystis s...
O06595         8 DAADVVVIGTGVAGLAAALAADRAGRsVVVLSKAaQTHVTATHYAQGGIAVVLPDNDdSVDAHVADTLAAGAGLCDPDAV 87  Mycobacterium t...
P38032         2 SKKTIAVIGSGAAALSLAAAFPPSYE-VTVITKK-SVKNSNSVYAQGGIAAAYAKDD-SIEAHLEDTLYAGCGHNNLAIV 78  Bacillus subtil...
O57765         2 MEMRVGIVGGGLAGLTAAIALAEKGFdVSIIGPR--STDSNSYLAQAGIALPLLEGD-SIRIHVLDTIKAGKYINDEEIV 78  Pyrococcus hori...
WP_001094491   7 HSCDVLIIGSGAAGLSLALRLADQHQ-VIVLSKG-PVTEGSTFYAQGGIAAVFDETD-SIDSHVEDTLIAGAGICDRHAV 83  Enterobacteriaceae
P74562        81 DFLVNHAPQAIAELVQFGVSFDRHGQ-----HLALTLEAAHSQPRVLHAA-DTTGRAIVSTLMGQVQarpNVEIFSQAIA 154 Synechocystis s...
O06595        88 YSIVADGYRAVTDLVGAGARLDESVPg----RWALTREGGHSRRRIVHAGgDATGAEVQRALQDAAG---MLDIRTGHVA 160 Mycobacterium t...
P38032        79 ADVLHDGKMMVQSLLERGFPFDRNERg----GVCLGREGAHSYNRIFHAGgDATGRLLIDYLLKRINs--KIKLIENETA 152 Bacillus subtil...
O57765        79 WNVISKSSEAHDFLTSHGVTFTGNEL--------E---GGHSYPRIFTIK-SETGKHIIPILEKHARe-lDVNFIRG-FV 144 Pyrococcus hori...
WP_001094491  84 EFVASNARSCVQWLIDQGVLFDTHIQpngeeSYHLTREGGHSHRRILHAA-DATGREVETTLVSKALnhpNIRVLERSNA 162 Enterobacteriaceae
P74562       155 LSLNIEp-----tTGHCRGIQVFVN--QTIETFHSRAVLLATGGGGQVFAQTTNPKVSTGDGIALAWRSGAQVRDLEFFQ 227 Synechocystis s...
O06595       161 LRVLHD-------GTAVTGLLVVRP--DGCGIISAPSVILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQ 231 Mycobacterium t...
P38032       153 ADLLIE-------DGRCIGVMTKDSk-GRLKVRHADEVVLAAGGCGNLFLHHTNDLTVTGDGLSLAYRAGAELTDLEFTQ 224 Bacillus subtil...
O57765       145 EEIGIN-------NGKLAGVFLQG------ELLKFDAVVIAAGGFSGLYRFTAGVKNNIGLLIGDVALKGVPLRDMEFVQ 211 Pyrococcus hori...
WP_001094491 163 VDLIVSdkiglpgTRRVVGAWVWNRnkETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQ 242 Enterobacteriaceae
P74562       228 FHPTALTKPGV--PHFLISEAVRGEGAHLLDRQGKRFAFDYHPRGELAPRDVVSRAIFQHLANTEKDptqaTVFLDLSPI 305 Synechocystis s...
O06595       232 FHPTMLFAGRAggRRPLITEAIRGEGAILVDRQGNSITAGVHPMGDLAPRDVVAAAIDARLKATGDP----CVYLDARGI 307 Mycobacterium t...
P38032       225 FHPTLLVKNGV--SYGLVSEAVRGEGGCLVDENGRRIMAERHPLGDLAPRDIVSRVIHEEMAKGNR------VYIDFSAI 296 Bacillus subtil...
O57765       212 FHPTGFIGKRT---Y-LITEAVRGAGAKLVTGDGERFVN------ELETRDIVARAIYMKMLEGKG------VFLDARGI 275 Pyrococcus hori...
WP_001094491 243 FHPTALYHPQA--RNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGAD----CMFLDISHK 316 Enterobacteriaceae
P74562       306 EPerIQRRFPNIIRRCLHWGVDIFREPIPVAPAAHYWMGGITTDINCQTTIPGLYALGETASTGVHGANRLASNSLLECI 385 Synechocystis s...
O06595       308 EG--FASRFPTVTASCRAAGIDPVRQPIPVVPGAHYSCGGIVTDVYGQTELLGLYAAGEVARTGLHGANRLASNSLLEGL 385 Mycobacterium t...
P38032       297 SD--FETRFPTITAICEKAGIDIHSGKIPVAPGMHFLMGGVSVNRWGETTVPGLYAIGETACSGLHGANRLASNSLLEAL 374 Bacillus subtil...
O57765       276 EN--FKDRFPYIYSVLRGEGINPEKDLIPITPVAHYTIGGISVDAFYRTRIKGLYAIGESACNGFHGANRLASNSLLECV 353 Pyrococcus hori...
WP_001094491 317 PAdfIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECL 396 Enterobacteriaceae
P74562       386 VF-ASQLRNLSLPPLAS--SDSNVNQSIKEIRLDTTN-DLALLNHWRSELPRLMWQTAGICRQAETLQMAIAKLEQWQEQ 461 Synechocystis s...
O06595       386 VVgGRAGKAAAAHAAAAgrSRATSSATWPEPISYTAL-DRGDLQRAMSRDASMYRAAAGLHRLCDSLSGAQVRDVACRRD 464 Mycobacterium t...
P38032       375 VFgKRAAEHIIQKPVYN---RQYQSGLETSVFYEVPDiEGHELQSKMTSHMSILREQSSLIELSIWLHTLPFQEVNVKDI 451 Bacillus subtil...
O57765       354 VSgLEVARTISREKPKR----E----VNDAPYSFNELgD-------VDSIREVLWNHAGIVRDEWSLREGLRKLKEI--E 416 Pyrococcus hori...
WP_001094491 397 VYgWSAAEDITRRMPYA--HDISTLPPWDESRVENPD-ERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQE 473 Enterobacteriaceae
P74562       462 WQQLssskllahlpedqkislsgpglnefmqlwaethNLLDIAQLILTSALFREESRGGHYRLDCP 527 Synechocystis sp. PCC 6803 su...
O06595       465 FEDV---------------------------------ALTLVAQSVTAAALARTESRGCHHRAEYP 497 Mycobacterium tuberculosis
P38032       452 TIRQme-----------------------------lsHLWQTAKLMTFSALLREESRGAHFRTDFP 488 Bacillus subtilis subsp. subt...
O57765       417 VDER----------------------------------LKLVAKAVIISALKREESRGAHYRKDYP 448 Pyrococcus horikoshii OT3
WP_001094491 474 IDEYyahfrvs-------------------nnllelrNLVQVAELIVRCAMMRKESRGLHFTLDYP 520 Enterobacteriaceae
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