Conserved Protein Domain Family
eIF-2B_rel

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TIGR00524: eIF-2B_rel 
eIF-2B alpha/beta/delta-related uncharacterized proteins
This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins. [Unknown function, General]
Statistics
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PSSM-Id: 273119
Aligned: 8 rows
Threshold Bit Score: 419.154
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q06489  35 IHTIDDGYSVIKSMQVRGAPAIAIVGSLSVLTEVQLIKHnptsdvatlyslVNWESTKTVLNKRLDFLLSSRPTAVNLSN 114 Saccharomyces cerevis...
Q57586   8 MDIIKETYEKIKNMEIRGAGRIGRAAAKALKEYALKISH------------LNEEEFKNKMREAGNILISARPTAVSLPN 75  Methanocaldococcus ja...
O28242   1 MEEVLEAAEKIRSMEVRGAARIARFAAETLMKFAEKAS---------------DEKFDEEMRFAAETLLNTRPTAVSLYN 65  Archaeoglobus fulgidu...
Q57896  34 CKTYEDVAYAIKDMVVRGAPAIGVSAAYGLALAEING---------------------DDIYKAYEVLKNTRPTAVNLFW 92  Methanocaldococcus ja...
O27900  30 CRDYRDVIYAIKNMVVRGAPAIGVTAAFGVAMAELAG---------------------EDVEVAAEEIKASRPTAVNLFW 88  Methanothermobacter t...
O29877  27 CRNVEELADAIKKLAVRGAPALEAAGAYGIALAAREREF------------ADVDELKEHLKKAADFLASTRPTAVNLFV 94  Archaeoglobus fulgidu...
P74497  37 IADYEAMGHAIKSMVVRGAPAIGVAAAYGMYLGARRIQT------------TELREFVVQLEFVADQLRQTRPTAVNLFW 104 Synechocystis sp. PCC...
O31662  35 LTTKEDVFDAIVTLKVRGAPAIGITAAFGLALAAKDIET------------DNVTEFRRRLEDIKQYLNSSRPTAINLSW 102 Bacillus subtilis sub...
Q06489 115 SLVEIKNILk-sSSdlKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYlidvlqkdgFKDEFAVLTICNTgslatsgyGT 193 Saccharomyces cerevis...
Q57586  76 VVKYVLKGL---NE--ENPKERVIERADEFINSSLKAIENIGKFGANR---------IKDGDTILTHCNS--------EA 133 Methanocaldococcus ja...
O28242  66 AINYVMRYS---GEsvEEKRQSVIRRAREFINWVETAQRKIGEIGEKR---------IKDGYTVMTHCNS--------SA 125 Archaeoglobus fulgidu...
Q57896  93 ALDRCLTAY-------KEGK-SILDEAKKIHEEDIETCKKIGMIGEKL---------IEDGDTILTHCNAgalatsayGT 155 Methanocaldococcus ja...
O27900  89 AVDRVMKSE------------SPLDEAITMYMEDMETNRAIGRHGAGL---------IEDGDTVLTHCNAgalacvdyGT 147 Methanothermobacter t...
O29877  95 GIERALNAAl-kGEsvEEVKELALREAEKLAEEDVERNRKMGEYGAEL---------LEDGDVVLTYCNAgrlatvdwGT 164 Archaeoglobus fulgidu...
P74497 105 AIDQMLNVAyhsGEnvEQIKANLLSQAQQIQLDDLRTCQAIGAAGLEVlp------rEPHQLTILTHCNAgalatagyGT 178 Synechocystis sp. PCC...
O31662 103 ALERLSHSVe-nAIsvNEAKTNLVHEAIQIQVEDEETCRLIGQNALQL---------FKKGDRIMTICNAgsiatsryGT 172 Bacillus subtilis sub...
Q06489 194 ALGVIRSLWKDSlaktdkadsgldnekcpRMGHVFPLETRPYNQGsRLTAYELVYDKIPSTLITDSSIAYRIRtspiPIK 273 Saccharomyces cerevis...
Q57586 134 AISVIKTAYDEG-----------------KDIKVFCTETRPRNQG-YLTAKTLYDYGIDVTLIVDSAVRYFIK----EID 191 Methanocaldococcus ja...
O28242 126 ALSVIKKAHENG-----------------KRVEVIATESRPRWQG-HLTVKQLREAGIEVTLIVDSAVRYFIN----EVD 183 Archaeoglobus fulgidu...
Q57896 156 ALSVIRFAFYNG-----------------KKIRVIADETRPRLQGaKLTAFELNYEGIPVKVITDNTAGFLMQk--gEID 216 Methanocaldococcus ja...
O27900 148 ALGVIRAAWDDG-----------------KRLTVICDETRPVGQGaRLSVWEMQQEGIPVKLITDVAAGYLMQt--gMID 208 Methanothermobacter t...
O29877 165 ALGVVRSAVEQG-----------------KEIRVIACETRPLNQGsRLTCWELMEDGIDVTLITDSMVGIVMQk--gMVD 225 Archaeoglobus fulgidu...
P74497 179 AIGVIRAAWSAG-----------------RLARVYADETRPRLQGaKLTVWECVQAGIPVTLITDNMAAHCMQq--qRID 239 Synechocystis sp. PCC...
O31662 173 ALAPFYLAKQKD-----------------LGLHIYACETRPVLQGsRLTAWELMQGGIDVTLITDSMAAHTMKe--kQIS 233 Bacillus subtilis sub...
Q06489 274 AAFVGADRIVRNGDTANKIGTLQLAVICKQFGIKFFVVAPKTTIDNVTETGDDIIVEERNPEEFKvVtgtvinpengsli 353 Saccharomyces cerevis...
Q57586 192 IVVVGADAITANGCLVNKIGTSQIALIANESRVPFLTAAETYKFHPKTIVGELIEIEERSPEEVA-V------------- 257 Methanocaldococcus ja...
O28242 184 CVVVGADTITANGALINKIGTSQIALAAKEARVPFMVAAETYKFSPKTLFGELVVIEERDAREVA-P------------- 249 Archaeoglobus fulgidu...
Q57896 217 KIIVGADRILADGTVYNKIGTYSLAVLAKYHRIPFYVAAPLSTFDLRSSE-EDVIIEERDEKEVAyId------------ 283 Methanocaldococcus ja...
O27900 209 KVIIGADRIAEGG-VANKIGSLMVALAAKRFNVPFYVAAPMSTFDTENSI-YDIEIEERDPAEVLyYg------------ 274 Methanothermobacter t...
O29877 226 KVIVGADRIVRDA-VFNKIGTYTVSVVAKHHNIPFYVAAPKATFDWERTA-KDVVIEERPREELIfCg------------ 291 Archaeoglobus fulgidu...
P74497 240 AVVVGADRIARNGDIANKIGTYGLAVLAKMHAIPFFVAAPLSTVDFALDDGSQIPIEERDPVEIYqPe------------ 307 Synechocystis sp. PCC...
O31662 234 AVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLSTFDTKVKCGADIPIEERDPEEVRqIs------------ 301 Bacillus subtilis sub...
Q06489 354 lnesgepitgkVGIAPLEINVWNPAFDITPHELIDGIITEEGVFTK 399 Saccharomyces cerevisiae S288c
Q57586 258 -----------FEDKYKGIKIRNPAFDVTPAKYIDAIITEVGLIPP 292 Methanocaldococcus jannaschii DSM 2661
O28242 250 -----------EEILKLGVKVRNPAFDVTPRDYIDVIITEIGAIPP 284 Archaeoglobus fulgidus DSM 4304
Q57896 284 ----------gVRIVPEGVGCYNYAFDKTPPDLITAIITEKGIVKP 319 Methanocaldococcus jannaschii DSM 2661
O27900 275 ----------gCRIAPQDTEAINPAFDIVPSDLISGIITEKGILDP 310 Methanothermobacter thermautotrophicus str. Delta H
O29877 292 ----------kRQIAPLNVKVYNPAFDPTPLENVTALITEYGVIYP 327 Archaeoglobus fulgidus DSM 4304
P74497 308 ----------gNRITPEGAEFYNPAFDVTPASLITAIITEQGAIAP 343 Synechocystis sp. PCC 6803 substr. Kazusa
O31662 302 ----------gVRTAPSNVPVFNPAFDITPHDLISGIITEKGIMTG 337 Bacillus subtilis subsp. subtilis str. 168
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