2BZ0


Conserved Protein Domain Family
ribA

?
TIGR00505: ribA 
Click on image for an interactive view with Cn3D
GTP cyclohydrolase II
Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal. The function of archaeal members of the family has not been demonstrated and is assigned tentatively. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD]
Statistics
?
PSSM-Id: 129596
View PSSM: TIGR00505
Aligned: 6 rows
Threshold Bit Score: 300.542
Threshold Setting Gi: 511141
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2BZ0_A         4 KRVAEAKLPTPW-GDFLMVGFEELATG-----------HDHVALVYGDIS-GHTPVLARVHSECLTGDALFSLRCDCGFQ 70  Escherichia col...
P25523         4 KRVAEAKLPTPW-GDFLMVGFEELATG-----------HDHVALVYGDIS-GHTPVLARVHSECLTGDALFSLRCDCGFQ 70  Escherichia coli
O29766       186 ERVIEATLPTKFyGTFRAVGYKTPLG-------------EIVALVKGRVD--EGDVLVRIHSECLTGDVFHSLRCDCGDQ 250 Archaeoglobus f...
O08315         5 EVSNQAKLPTQF-GEFYIQCFREKGSNg---------sKDHLVVFTPNFS---QNPLVRLHSECLTGDALGSQKCDCGGA 71  Helicobacter py...
WP_005691580  13 QLVAQANLPTEY-GIFKMVGFEFPDTK-----------KEHVALVMGDISnADEPVLARIHSECLTGDALHSLKCDCGFQ 80  Haemophilus
CAA52759      85 ETQQDRMIRGAYiGKLYPGRTVADEDDrlglalefddsTGELLASKATTWdAHNDTLVRIHSECYTGENAWSARCDCGEQ 164 baker's yeast
2BZ0_A        71 LEAALTQIAEEGR-----------GILLYHR-QEGRNIGLLNKIRAYALQDQGYDtVEANHQLGFAADERDFTLCADMFK 138 Escherichia col...
P25523        71 LEAALTQIAEEGR-----------GILLYHR-QEGRNIGLLNKIRAYALQDQGYDtVEANHQLGFAADERDFTLCADMFK 138 Escherichia coli
O29766       251 LENALKMIDREGK-----------GVAIYMRgHEGRGIGLINKLMAYKLQEEGKDtVDANIELGFPPDMRSYGIAAQILM 319 Archaeoglobus f...
O08315        72 LQMALERISKEG------------GLVIYLR-QEGRGIGLFNKVNAYALQDKGYDtIQANEMIGFKDDERDYSVAGEILE 138 Helicobacter py...
WP_005691580  81 LATALKQIQEEGR-----------GVLIYHR-EEGRGIGLINKIRAYSLQDKGMDtIEANLALGFKADERNFEVCADMFE 148 Haemophilus
CAA52759     165 FDRAGRLIACDHEptskikggnghGVIVYLR-QEGRGIGLGEKLKAYNLQDLGADtVQANLMLKHPVDARDFSLGKAILL 243 baker's yeast
2BZ0_A       139 LLGVNEVRLLTNNPKKVEILTEA-GINIVERVPL--IVGRN-------PNNEHYLDTKAEKMGHLL 194 Escherichia coli BW2952
P25523       139 LLGVNEVRLLTNNPKKVEILTEA-GINIVERVPL--IVGRN-------PNNEHYLDTKAEKMGHLL 194 Escherichia coli
O29766       320 DLKVKSIRLLTNNPLKIEELKKY-G-FKIVREPI--EVEPC-------EVNLPYLKAKKDKMGHLI 374 Archaeoglobus fulgidus DSM 4304
O08315       139 YYRIKKMRLLTNNPKKIAALEKY---AEVTRESL--IVCAN-------EHNQGYLEVKKLKMGHLL 192 Helicobacter pylori 26695
WP_005691580 149 LLGVKKVRLMTNNPEKVETMKKA-GINVVERVPL--NVGEN-------RYNTKYLDTKAKKMGHYI 204 Haemophilus
CAA52759     244 DLGIGNVRLLTNNPEKIKQVDHApYLKCVERVPMvpIHWTNssegidsKEIEGYLRTKIERMGHLL 309 baker's yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap