Conserved Protein Domain Family
genX

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TIGR00462: genX 
EF-P lysine aminoacylase GenX
Many Gram-negative bacteria have a protein closely homologous to the C-terminal region of lysyl-tRNA synthetase (LysS). Multiple sequence alignment of these proteins with the homologous regions of collected LysS proteins shows that these proteins form a distinct set rather than just similar truncations of LysS. The protein is termed GenX after its designation in E. coli. Interestingly, genX often is located near a homolog of lysine-2,3-aminomutase. Its function is unknown. [Unknown function, General]
Statistics
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PSSM-Id: 273090
Aligned: 54 rows
Threshold Bit Score: 359.557
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011388833  34 FLGESGCIEVDTPALQISPGLEPHLRAFATTLEKPfDQG-RATLRLHTSPEFAMKKILAAGETAIFQLAHVFRNGERGPT 112 Rhodospirillum ...
WP_004512007  27 FFIEGGYLEVETPLRIPACAPESHIDPVPADG-----------WFLQTSPEICMKRMLAAGYERLFQISHCWRAGERGRM 95  Geobacter metal...
WP_011939037  27 FFIKEGYLEVDTPLRIPAPAPESYIEAIPSG-----------RWFLHTSPELCMKRMLAAGYERIFQICRCWRDGERGIR 95  Geobacter urani...
WP_011416783  52 FFRERDYLEVDTPILIPAPAPESHIDAVACGFQ-----------YLQTSPELCMKRLLAAGYPRLFQICSCFREAERGTR 120 Syntrophus acid...
WP_011342256  28 FFVGRDFLEVETPHRIPGNAPEAHIDAV----------Q-SDDWFLHTSPELCMKRLLAAGYPQLFQLCRCWRAAERGSR 96  Pelobacter carb...
WP_011422774  23 ILGGLGYEEVETPCLVPAPGMEPHIDAFQATFVPE-GGGtSRPLWLQNSPEYAMKRLLAEGFERVFQLARVFRNGEVSRT 101 Anaeromyxobacte...
WP_010942397  27 FFVEGGYLEVETPLRIPAPAPESHIDPVPSG-----------PWFLQTSPELCMKRLVAAGYERVFQISRCWRDGERGNM 95  Geobacter sulfu...
WP_011696952  27 HFRRAGFLEVQTPLLTPAPAPELNIEAVPA----------GDGFFLATSPELYMKRLLAAGYGKLFQLTPVFRSGERGRL 96  Syntrophobacter...
WP_011188091  20 FFYEQGFLEVDTPVRSPVLIPESTIEPISCG-----------DFFLQTSPELYMKRILAAGNEKIFQICPCFRKGERGRL 88  Desulfotalea ps...
WP_011309345  29 FFNEQGFLEVETPVFVPSVVPERYIKPVECQ-----------NGYLSTSPELYMKRMLASGYTNIYQISRCFRDGEKGRH 97  Dehalococcoides...
WP_011388833 113 HHPEFTMLEWYRSAMSYEALMAETEDLVRAVARatgaerlv---wgdaaadpFGPWERLSVAQALERYAGIDLLGAldag 189 Rhodospirillum ...
WP_004512007  96 HVPEFTMLEWYRAGTDYRGVMDETELLIRFVAEgagfggpls--frgkeidiTAVWERITVRDAFVRYGGITM------- 166 Geobacter metal...
WP_011939037  96 HLPEFTMLEWYRIDADYRDLMSECEALIRSVIHvlghggsir--yqgmaveiNEPWEKLTVSEAFIRYNG---------- 163 Geobacter urani...
WP_011416783 121 HLPEFTLLEWYAQGKDYMFLMEECEALLRFLAVtlygkeeit--fqgsridlSAPWERLSVNEAFLRYGGI--------- 189 Syntrophus acid...
WP_011342256  97 HLPEFTMLEWYAAGCDYHTLMEQCESLLATLLPggnltyr------gqtidlTPPWERLTVDEAFDRY------------ 158 Pelobacter carb...
WP_011422774 102 HNPEFTMLEFYRAGTDYRGIMADLEALVDGAARallpggeprvtrdgralslAAPFETLTVAEAFRRHARVDLEAC---- 177 Anaeromyxobacte...
WP_010942397  96 HLPEFTMLEWYRAGTDYRGLMNECEELVGAVAAalgmgevln--vkgrnirlGAPWERLSVAEAFERYC----------- 162 Geobacter sulfu...
WP_011696952  97 HHPEFTLLEWYRTGASYKDMQRDCVELLHEVCAfgaatgggt--crgsviepGKPWESLTVRDAFLRLAGWDPVV----- 169 Syntrophobacter...
WP_011188091  89 HAEEFTMLEWYRLDEDYHALMADCQQLVSYLAEalqahtsel--gridraylNGSWQRLTVAEAFALWSPI--------- 157 Desulfotalea ps...
WP_011309345  98 HNPEFSMLEWYRVGADYLQMINDTENLFYHISMklfgkiqir--ylgqdidlTPPWERLTVRDAFLNTVGWDP------- 168 Dehalococcoides...
WP_011388833 190 vaisgnalepDAGALAEAARAIG---IACSPNDRFEDVFFRIVLDRVEHRLGHERPCILYDYPACMAALSRRKDDDPRLA 266 Rhodospirillum ...
WP_004512007 167 ------------------------------DEALERDIFDEMMVEQIEPRLGIGRPTFIHDYPSCRSALARLKKDDPAVA 216 Geobacter metal...
WP_011939037 164 ---------------------------MTMAEALETDQFDEIMVRDIEPRLGFGKPTFIYDYPAERGALARISKDNPAVA 216 Geobacter urani...
WP_011416783 190 ----------------------------SARQTLAEDIFDEVLVSRIESRLGIERPTFLYDYPVELAALARAKPNDPSLA 241 Syntrophus acid...
WP_011342256 159 ----------------------G---SLSLRQALDEDRFDEIISFEIEPRLGIGKPTFLMEYPAELAALARRHPERPHVA 213 Pelobacter carb...
WP_011422774 178 ----------AGDADRLARAARAaghDPGPPGEAFDDVFFRVMLDAVEPRLGVDRPTWLVDWPASMAALSKVKAADPRWA 247 Anaeromyxobacte...
WP_010942397 163 --------------------------DRTMEEALANDTFDECMVNDIEPRLGFATPTFICDYPADRGALARLKQDEPSRA 216 Geobacter sulfu...
WP_011696952 170 --------------------------------DFDPDRFDVDLVTKVEPYLGFPNPCFLEDYPPERAALARLKDSAPPVA 217 Syntrophobacter...
WP_011188091 158 -------------ELKQAMA---------------DDIFEEMLVEYIEPRLGIDSPTFLYDYPASMASLARLSASNSEVA 209 Desulfotalea ps...
WP_011309345 169 ------------------------------VNTDDEKRFDEDLVLKVIPSFQSHRPTVLLDYPAKMASLARLKKTNPEVA 218 Dehalococcoides...
WP_011388833 267 ERFEVYVGGLELANAFGELTDAAEQRARFTHDMDVKEALYGERYPIDGDFLEALDQGLAPCSGIALGFDRLVMLCTGADA 346 Rhodospirillum ...
WP_004512007 217 ERFELYLGGVEIANAFSELTDPVEQRARFESENAFRTSRGQTSTPLPEKFLAELTA-MPQAAGIALGIDRLVMVLLDADT 295 Geobacter metal...
WP_011939037 217 ERFELYIGGLELANAFSELTDAQEQRDRFVQESTFRASMNRATYPLPEKFLDELSD-MPPSAGIALGVDRLVMVLLDLSS 295 Geobacter urani...
WP_011416783 242 ERFELYVAGIELANAFSELIDPVEQSRRFEEAQQERRALGKSPYPWPERFLRALSA-MPPSTGIALGIDRLVMLMTDRAF 320 Syntrophus acid...
WP_011342256 214 ERFELYIAGLELANAFSELTDPVEQRGRFVAEEAMRRDTGKPPYPSPEKFLRELEA-MPEAAGIALGVDRLVMLITGAET 292 Pelobacter carb...
WP_011422774 248 ERFELYAGGLELANGFTELTDAREQRARLLEEQALRRRLGRPGYPLDEKFLEAVGR-MPEAGGVAVGFDRLLMLLTGAAS 326 Anaeromyxobacte...
WP_010942397 217 ERFELYIAGVELANAFSELTDPVEQRSRFEQEKLFRESRGKSAIPLPEPFLAELHH-LPPTAGIALGIDRMVMLLLDLDS 295 Geobacter sulfu...
WP_011696952 218 ERFELYWAGIELANGFTELTDPAEQRKRFEAVLADRHEAGLSSRPMPEAFLAAIEH-LPQCAGIALGLDRLVMLLAGADS 296 Syntrophobacter...
WP_011188091 210 ERFELYMHGIELANGFSELTDEVEQEMRFKEELAAIKREGRWQATLPVKFLQEL-AGLDKATGIALGLDRLLMLFLGKES 288 Desulfotalea ps...
WP_011309345 219 ERAEFFISGLEMANAYSELTNPLEQSARFAEEKKLIEAEQNRRVVTPEIFLEAVKY-LPVCTGNALGIDRLVMFFCNTDQ 297 Dehalococcoides...
WP_011388833 347 IDDVLW 352 Rhodospirillum rubrum
WP_004512007 296 IDDVVA 301 Geobacter metallireducens
WP_011939037 296 IDDVVA 301 Geobacter uraniireducens
WP_011416783 321 IDDVVA 326 Syntrophus aciditrophicus
WP_011342256 293 IDEIVA 298 Pelobacter carbinolicus
WP_011422774 327 IEEVLL 332 Anaeromyxobacter dehalogenans
WP_010942397 296 IDDVVA 301 Geobacter sulfurreducens
WP_011696952 297 VDRVVA 302 Syntrophobacter fumaroxidans
WP_011188091 289 IAEVVS 294 Desulfotalea psychrophila
WP_011309345 298 IQDVMP 303 Dehalococcoides mccartyi
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