Conserved Protein Domain Family
aspS_nondisc

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TIGR00458: aspS_nondisc 
nondiscriminating aspartyl-tRNA synthetase
In a multiple sequence alignment of representative asparaginyl-tRNA synthetases (asnS), archaeal/eukaryotic type aspartyl-tRNA synthetases (aspS_arch), and bacterial type aspartyl-tRNA synthetases (aspS_bact), there is a striking similarity between asnS and aspS_arch in gap pattern and in sequence, and a striking divergence of aspS_bact. Consequently, a separate model was built for each of the three groups. This model, aspS_arch, represents aspartyl-tRNA synthetases from the eukaryotic cytosol and from the Archaea. In some species, this enzyme aminoacylates tRNA for both Asp and Asn; Asp-tRNA(asn) is subsequently transamidated to Asn-tRNA(asn). [Protein synthesis, tRNA aminoacylation]
Statistics
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PSSM-Id: 273087
Aligned: 4 rows
Threshold Bit Score: 664.986
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q58950    11 HYSADIKPEMDG-QEVIIMGWVHSIRALGK-IIFVILRDREGTVQIVAPKQK--V-GDELFSQIKKLGAEDVIAVKGKVI 85  Methanocaldococcus ...
O26328    10 HYSKDIEPEMDG-DEVTVMGWVHEIRDLGG-IIFVLLRDRDGLIQITAPSKK--I-EKDLFKSIRKLKKESVVAFGGTVQ 84  Methanothermobacter...
O29342     3 VYTADVKPEMEG-QKVTLYGWVHEVRDLGG-LVFILLRDREGIVQITLPRKF--V-SKQVFKLAKKIRRESVIAVTGEVR 77  Archaeoglobus fulgi...
CAA29865  94 VKFVDLDEAKDSdKEVLFRARVHNTRQQGAtLAFLTLRQQASLIQGLVKANKegTiSKNMVKWAGSLNLESIVLVRGIVK 173 baker's yeast
Q58950    86 -----ANEKAPNGFEILPLELEVINTAKRPLPLDPAE--KVPAELD----------TRLENRFLDLRRPKVQAIFKIRSE 148 Methanocaldococcus ...
O26328    85 -----ESGKAPGGFEIIPSFLKVLNISKQPLPLDPTE--KVKAEID----------TRLDARFLDLRKPSVSAIFKIKSR 147 Methanothermobacter...
O29342    78 -----REEKAPGGVEIIPESIEVLNEADAPLPLEVTE--KVPAELD----------TRLDHRFMDLRRPRVQAIFRIRHQ 140 Archaeoglobus fulgi...
CAA29865 174 kvdepIKSATVQNLEIHITKIYTISETPEALPILLEDasRSEAEAEaaglpvvnldTRLDYRVIDLRTVTNQAIFRIQAG 253 baker's yeast
Q58950   149 MLKSVRNTLYNEGFIEVNTPKLVASCTEGGTELFPISYFEREAFLGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRR 228 Methanocaldococcus ...
O26328   148 MLHSVRVFLEEQGFLEINTPKLVASATEGGTELFPITYFEREAFLGQSPQLYKQIMMSTGLDRVYEIAPIFRAEEHDTLR 227 Methanothermobacter...
O29342   141 VMQSVREFLSEEGFIEVHTPKIVSTATEGGTELFPISYFEKEAFLNQSPQLYKQVLMAAGFEKVFEIGPIFRAEEHNTTR 220 Archaeoglobus fulgi...
CAA29865 254 VCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHR 333 baker's yeast
Q58950   229 HLNEATSIDIEMAFADD-KDAMDILEKVVYNAFVDVYENRKK-------EIETLGIEFELPPEKFDRITYDEAIDIANAK 300 Methanocaldococcus ...
O26328   228 HLNEVISIDIEASFVDH-EDVMKILENLVVRVIEDVNEHCTD-------ALETLGRTLEVPETPFERLEYDEAVEMVNSK 299 Methanothermobacter...
O29342   221 HLNEAISIDIEMSFTDH-NGVMDVLERLVQRVYEDVAEKCER-------YLGWLEVSLEIPELPFPRITYDEAREIAARK 292 Archaeoglobus fulgi...
CAA29865 334 HMTEFTGLDMEMAFEEHyHEVLDTLSELFVFIFSELPKRFAHeielvrkQYPVEEFKLPK-DGKMVRLTYKEGIEMLRAA 412 baker's yeast
Q58950   301 GVEISWGEDLSREAEKAIG----EEMEGLYFITD-WPSEIRPFYTMP-DEKNPNICKAFDLMYKDLEISSGAQRIHLYDL 374 Methanocaldococcus ...
O26328   300 GVPMKHGEDLPRAAEKALG----EIMDGYYFITS-WPTAIKPFYVMP-DEDDPERSHAFDLMYRDLEISSGAMRVHQHDL 373 Methanothermobacter...
O29342   293 GEEIPWGEDLSTNALKLVG----EEMGGLYFITD-WPTESKPFYAMP-YEDRPEISKSFDLMHGWLELSSGAQRIHLYDM 366 Archaeoglobus fulgi...
CAA29865 413 GKEIGDFEDLSTENEKFLGklvrDKYDTDFYILDkFPLEIRPFYTMPdP-ANPKYSNSYDFFMRGEEILSGAQRIHDHAL 491 baker's yeast
Q58950   375 LVENIKKKGLNPD--GFTYYLEAFKYGMPPHAGWGLGADRFTMVLTQQENIRECVLFPRDRQRLTP 438 Methanocaldococcus jannaschii DSM...
O26328   374 LVEKIKRQGLNPD--SFESYLSAFEYGMPPHAGWGLGAERFNMTLTGLKNIRETVLFPRDRRRLTP 437 Methanothermobacter thermautotrop...
O29342   367 LVESIKAKGMEPE--SFGFYLEAFRYGMPPHAGWGLGAERLIMSMLGLKNVREAVLFPRDRHRLVP 430 Archaeoglobus fulgidus DSM 4304
CAA29865 492 LQERMKAHGLSPEdpGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKRLRP 557 baker's yeast
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