Conserved Protein Domain Family
arcsn_tRNA_tgt

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TIGR00432: arcsn_tRNA_tgt 
tRNA-guanine(15) transglycosylase
This tRNA-guanine transglycosylase (tgt) differs from the tgt of E. coli and other Bacteria in the site of action and the modification that results. It exchanges 7-cyano-7-deazaguanine (preQ0) with guanine at position 15 of archaeal tRNA; this nucleotide is subsequently converted to archaeosine, found exclusively in the Archaea. This enzyme from Haloferax volcanii has been purified, characterized, and partially sequenced and is the basis for identifying this family. In contrast, bacterial tgt (TIGR00430) catalyzes the exchange of preQ0 or preQ1 for the guanine base at position 34; this nucleotide is subsequently modified to queuosine. Archeoglobus fulgidus has both enzymes, while some other Archaea have just this one. [Protein synthesis, tRNA and rRNA base modification]
Statistics
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PSSM-Id: 273074
Aligned: 3 rows
Threshold Bit Score: 638.887
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q57878 106 MEIIEFQERIGVDVGTILDIPTPPDVDRERAEKELEETLKRAKASIELKEErgFKLLLNGTVQGSTYLDLRQKSAKEMAK 185 Methanocaldococcus ja...
O29667 104 AEIVEFQRHIGSDIIVPLDIPTPPDADYATAESDLRITLEREREAKELLKG--AENLLAVPVQGSTHPDLRRFAAGEARK 181 Archaeoglobus fulgidu...
O26278 108 PEIIRFQDEIGTDIGTSLDIPTPPGVSHRRAIEEVEVTLERARESIEYRER----MMLNAVVQGSTHPDLRRYCASRLAE 183 Methanothermobacter t...
Q57878 186 LGFDIYPIGAVVPLMEQYRYRDVAEIIINSKMYLPtNKPVHLFGCGHPMFFALAVALGCDLFDSAAYALYAKDDRYLTER 265 Methanocaldococcus ja...
O29667 182 IGGDIYPIGAVVPLMDAYRFRDLARVILEVRSALP-VEPIHLFGCGHPMLFAMAVALGCDLFDSAAYALYAKDDRYLTVY 260 Archaeoglobus fulgidu...
O26278 184 LPVELHPIGAVVPLMESYRYRELVDAVLSSVSELPpSRPRHLMGAGHPMLFALAVSMGCDLFDSAAYILYAEDDRLLSTE 263 Methanothermobacter t...
Q57878 266 GTLHLEEIKdlkAFPCSCPVCSSYTPKELASLNKKERERLLAEHNLYVTFEEINRIKQAIRDGSLWELVEERVRCHPKLL 345 Methanocaldococcus ja...
O29667 261 GTKKLSELN---YFPCKCPVCSNHDPEELRRMEKNERERLIAEHNLYVSFQEIETIKQAIKENSLFELVEKRVRAHPNML 337 Archaeoglobus fulgidu...
O26278 264 GTYKLENl---qEMPCSCSVCTDYTPSELMGMDREERRNLIAEHNLHVSFAEIRKVRQAIHDGNLMELVEERCRAHPRLL 340 Methanothermobacter t...
Q57878 346 EAYRVVRKYIDYIEKFDPvTKKSAFFYTGIESMFRPEVLRHKKRLKRLRYEKVYITTvs-----sSIEKPYhehlnvvet 420 Methanocaldococcus ja...
O29667 338 AGWRQVKHYWELLEKADP-KMKRKFLYTGIDSLYRPAVRRHVKAIKNVELPEEVLVS--------TDFGIY--------- 399 Archaeoglobus fulgidu...
O26278 341 EGYRRMSEYLDLIEKFEPrSKRSAFFYTGPESLGRVEVHRHLKRVKEHLGERLALVApsrrpyssSLPARIggfsslrpq 420 Methanothermobacter t...
Q57878 421 dVDi---LIKDPVFGFIPYYIDTVYPLSQHEIPELFDYE-KEINKRFVDEFIDWlkkkigedniLDIMTYNYYINYFSAN 496 Methanocaldococcus ja...
O29667 400 -AN----IYLRPVFGPVPAEMLETYPAGHAEIPEEDVVE-EEALKAASEALMEL----------MNSHPEKRFKVYVSKV 463 Archaeoglobus fulgidu...
O26278 421 sGGpwrvVVVDLPFGIIPLELDQVYPLAQSDAPGIMDLDgEEFLRGLVRDLMDGdaiv--ddalCSELGIELPYKYMGEV 498 Methanothermobacter t...
Q57878 497 kkinadalrirKMLQYQYGFDIIDDELMN 525 Methanocaldococcus jannaschii DSM 2661
O29667 464 -----------WMKHLQNLPPNGELNVLS 481 Archaeoglobus fulgidus DSM 4304
O26278 499 ettvddldrvrMVADYQFGMGAGELLFTD 527 Methanothermobacter thermautotrophicus str. Delta H
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