1NEK


Conserved Protein Domain Family
dhsB

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TIGR00384: dhsB 
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succinate dehydrogenase and fumarate reductase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Statistics
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PSSM-Id: 273049
Aligned: 10 rows
Threshold Bit Score: 303.968
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NEK_B         7 IYRYNpdvDd-aPRMQDYTLEadEGrdmMLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISAl-- 82  Escherichia coli
P44893        11 VLRYNpeiDq-ePHLSTYQVPydNQt--SLLDALGYIKdKLEPSLSYRWSCRMAICGSCGMMVNNKPKLACKTFLRDy-- 85  Haemophilus inf...
P21801        38 VYRWNpdePsakPHLQSYQVDlnDCg-pMVLDALLKIKdEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQn-- 114 Saccharomyces c...
P07014         7 IYRYNpdvDd-aPRMQDYTLEadEGrdmMLLDALIQLK-EKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISAl-- 82  Escherichia col...
WP_001312375  33 VVRYNpevDt-aPHSAFYEVPydATt--SLLDALGYIKdNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDytd 109 Escherichia coli
Q57557         6 VKRFN---Ge-kEYLESYEVP--ENi--TVLEALEYINkHYEANILFRASCRNAQCGSCAVTINGEPRLACETKVED--- 74  Methanocaldococ...
WP_010872401   7 ILRQKpqqS---PYLEKFDLEvePGa--TILECLNQIKwEQDGSLNFRKNCRNTICGSCSMRVNGRSALACKENVGSe-- 79  Synechocystis s...
WP_010878185   6 IRRFD---Gt-kAYWQSFEVPakRGm--TVLEALYYIKeNLDSSLAFRASCRMGICGSCAMKINDKPRLACETQVLTl-- 77  Archaeoglobus f...
WP_010873761   7 IQRQLtdgD---RHWQNYYLDvdPQt--SILNCLNQIKwQQDGSLAFRKNCRNAICGSCAVRVNDRPVLACKESIKSl-- 79  Synechocystis s...
WP_010877452  10 VLRFEpgvDe-kPHLESYEIPskEKm--KVLDALQLINkIHGANIAFRSSCRAGQCGSCAVKMNGEVVLACRAEVED--- 83  Methanothermoba...
1NEK_B        83 Nqpgk--------kivIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPARe-----------HlQMPEQREKL 143 Escherichia coli
P44893        86 Sgh-----------mrIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEAPALDGkphpskelqvsrTkQTPAQLEKY 154 Haemophilus inf...
P21801       115 Eskq----------lkIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRSSFPKDGTe-----------VlQSIEDRKKL 173 Saccharomyces c...
P07014        83 Nqpgk--------kivIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPARe-----------HlQMPEQREKL 143 Escherichia col...
WP_001312375 110 Gm-------------kVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGt-----------NiQTPAQMAKY 165 Escherichia coli
Q57557        75 Gm-------------iIEPLRGFKVIRDLIVDREPYYKKLLGIKNYLIRKNYPEELE------------I-LIPKYVEEN 128 Methanocaldococ...
WP_010872401  80 TrlftqvneagipvvtVAPLGNLPVIKDLIVDMQPFWDDLERVEPYVSTQGRKVPERe-----------FlQTPAEREKL 148 Synechocystis s...
WP_010878185  78 Gna-----------vkVEPLDNFKVIKDLITEFDGFFAKHKAVKPYLIRKDDNYAEPk----------eLlQTPEELNEY 136 Archaeoglobus f...
WP_010873761  80 GqwlaesnqentgvftISPLGNLPVIKDLVVDMEKFFAGLDAVYPYLINKHQGEKGAe-----------FsQSPEQRAAL 148 Synechocystis s...
WP_010877452  84 Ga-------------iIEPID-LPVIKDLMVDRGEIEEKVKSMQLYLQASS----EGi-----------QrIRPEDYLDS 134 Methanothermoba...
1NEK_B       144 DGLYECILCACCSTSCPSFwWNPDkFIGPAGLLAAYRFLIDSRDteTDSRLDGLSd-AFSVFRCHSIMNCVSVCPKGLN- 221 Escherichia coli
P44893       155 RQFSMCINCGLCYAACPQFgLNPE-FLGPAAITMAHRYNLDNRDhgKAKRMSLLNg-KNGVWSCTFVGYCSEVCPKHVD- 231 Haemophilus inf...
P21801       174 DGLYECILCACCSTSCPSYwWNQEqYLGPAVLMQAYRWLIDSRDqaTKTRKAMLNn-SMSLYRCHTIMNCTRTCPKGLN- 251 Saccharomyces c...
P07014       144 DGLYECILCACCSTSCPSFwWNPDkFIGPAGLLAAYRFLIDSRDteTDSRLDGLSd-AFSVFRCHSIMNCVSVCPKGLN- 221 Escherichia col...
WP_001312375 166 HQFSGCINCGLCYAACPQFgLNPE-FIGPAAITLAHRYNEDSRDhgKKERMAQLNs-QNGVWSCTFVGYCSEVCPKHVD- 242 Escherichia coli
Q57557       129 KELRGCIDCLSCLSVCPAR-EVSD-YPGPTFMRQLARFAFDKRD--EDGREITAY--FENIYNCTTCAKCVEVCPKEIDi 202 Methanocaldococ...
WP_010872401 149 NQMGNCILCGACYSECNAKsVNPD-FVGPHALAKAQRLLTDSRDgaTADRLESYNnaTAGAWGCTRCYLCNEVCPMEVA- 226 Synechocystis s...
WP_010878185 137 YVFTLCIKCGACYSVCPAAaTLDG-YLGPAAMTAAYRFCADSRDdgQRERYEIASs-SNGVWRCHLAMECSEVCPKNVE- 213 Archaeoglobus f...
WP_010873761 149 NDVSNCVLCGVCYSDCDAKkKNEN-FVGPHALAKANRLILDNRDmaTKARLEALGkdKQGVWGCNNCRMCSDSCPTGVA- 226 Synechocystis s...
WP_010877452 135 KKLRGCIECFSCISSCPVIkESSE-YAGPYFMRYLSKFAFDPRD--TGDRAQEGVd-K-GLYCCTTCGKCAEVCPKELNv 209 Methanothermoba...
1NEK_B       222 PTRAIGHIK 230 Escherichia coli
P44893       232 PASAINQGK 240 Haemophilus influenzae Rd KW20
P21801       252 PGLAIAEIK 260 Saccharomyces cerevisiae S288c
P07014       222 PTRAIGHIK 230 Escherichia coli K-12
WP_001312375 243 PAAAIQQGK 251 Escherichia coli
Q57557       203 VHRAIEKLR 211 Methanocaldococcus jannaschii DSM 2661
WP_010872401 227 PMDQIGKIK 235 Synechocystis sp. PCC 6803
WP_010878185 214 PAKAVQMLR 222 Archaeoglobus fulgidus
WP_010873761 227 PLSQIEALK 235 Synechocystis sp. PCC 6803
WP_010877452 210 PGDAIEKLR 218 Methanothermobacter thermautotrophicus
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