1STZ


Conserved Protein Domain Family
hrcA

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TIGR00331: hrcA 
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heat shock gene repressor HrcA
HrcA represses the class I heat shock operons groE and dnaK; overproduction prevents induction of these operons by heat shock while deletion allows constitutive expression even at low temperatures. In Bacillus subtilis, hrcA is the first gene of the dnaK operon and so is itself a heat shock gene. [Regulatory functions, DNA interactions]
Statistics
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PSSM-Id: 273017
Aligned: 18 rows
Threshold Bit Score: 293.032
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1STZ_A    16 NDRQRKVLYCIVREYIENKKPVSSQRVLEV-SNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKI 94  Thermotoga maritima
P25499     3 TNRQLLILQVIINDFIKSAQPVGSRTLSKK-DEITFSSATIRNEMADLEELGFIEKTHSSSGRVPSEKGYRYYVDHLLSP 81  Bacillus subtilis s...
P30727     4 EERKLKILQAIINDYINNGEPVGSRTIAKK-YNLGISSATIRNEMADLEEMGYIEQLHTSSGRKPSDKGYRLYVDRLMEI 82  Clostridium acetobu...
Q8KCD6     7 TLRERQVLGIIIQSYVVSAMPVGSRTIARN-YNLGLSDATIRNVMADLEADGFISQPHTSAGRVPTDKGYRYYVDLIMNV 85  Chlorobium tepidum TLS
Q9RDD6     3 SERRLKVLRAIVQDYVGTEEPVGSKALTER-HNLGVSPATVRNDMAALEDEGFIAQPHTSAGRIPTDKGYRLFVDKLAGV 81  Streptomyces coelic...
P45556     3 TDRQLSILNAIVEDYVDFGQPVGSKTLIER-HNLNVSPATIRNEMKQLEDLNYIEKTHSSSGRSPSQLGFRYYVNRLLEQ 81  Staphylococcus aure...
CAE77234   3 TNRQIKILQTIVEEFIKTNQPVGSKRILEL-LNMKISSATIRNESATLEHEGYLEKQHTSSGRTPSTKGYRYYVDNIMKL 81  Mycoplasma mycoides...
Q98R68    11 ETKKTILFKNIVELYLRTGKPIGSKFLVEQdYGLGKSSATIRNMMHEFEEIGLLEKSHISSGRIPSTLGLKYYVKYLAN- 89  Mycoplasma pulmonis...
BAD04791   6 SDRKKLILKAVVENYSQKGQPVGSKLLTHL-PYLKFASATIRYDMVQLEKEGFLQKNHTSSGRVPSFKGYTYYLNHLLTR 84  Onion yellows phyto...
P54306    16 DSKISHVLLMAIKLYLESGQPVGSKLLKET-YCSDLSSATIRNYFAQLETDGFLRKNHISGGRIPTDLAFRYYADHCSP- 93  Chlamydia muridarum...
1STZ_A    95 SKETSEADLAVETfKSMPLADPE----KVLFLAGNLLARLTEGYVLIER-PNTrDLKILRVMLIPVSEDYLIFSILTEFG 169 Thermotoga maritima
P25499    82 VKLTKSDLDQIHS-IFKEKIFELe---KTVQKSAQILSDLTNYTSIVLG-PKLsENYLKQIQIIPIQPDMAVAILVTNTG 156 Bacillus subtilis s...
P30727    83 PSMSVEEEMLIKAkIIDSALYEId---KLVKQAMSLVSEMTKLTCVVKS-LSArKSYIKSISLINIEPNMILCVFITDSG 158 Clostridium acetobu...
Q8KCD6    86 SRIDEEEKRMIDDrFSNRNSELKgtsaEVLGTAARVLGSISRQLAVVLP-PRLsNAVFERLDIVQLASSRIMVVIAIQSL 164 Chlorobium tepidum TLS
Q9RDD6    82 KPMTAPERRAIQNfLEGAVDLDD-----VVARTVRLLAQLTRQVAVVQY-PSLtRSTVRHVELLSLAPARLMLVLITDTG 155 Streptomyces coelic...
P45556    82 TSHQKTNKLRRLNqLLVENQYDVs---SALTYFADELSNISQYTTLVVH-PNHkQDIINNVHLIRANPNLVIMVIVFSSG 157 Staphylococcus aure...
CAE77234  82 DSADYTRLKIYLNqLLDLRKYDId---KTINYASEIISELTKMTAVVIKkQNIkDIKLKKIELILLSEFLASVLFIFSDG 158 Mycoplasma mycoides...
Q98R68    90 -SEDSDLKKQLKKlFFQRKLTID----ETIELAAKSISEIVGLTMVTST--ENsFETLKSIQLVLLDKNESIIIIVLSSG 162 Mycoplasma pulmonis...
BAD04791  85 DHDVACMFESIDKvIQKKRFCKG----QVIKEALSLLNNLTNYTAMAIGsDIFnNSKINKIDFIPLNSTQAVILIITDKG 160 Onion yellows phyto...
P54306    94 -VLEQEEISIIQQkLKELPEYSKni-vKDLQKASEILSEILQLPVCFSS-PRFeSDSVTNIQLVSIDDLRVVFVLSTEFG 170 Chlamydia muridarum...
1STZ_A   170 VSKVTPIKTQE--RLNWEEIER---QLNFLLRGRTVGEVLMGKIESLKG----------SGFLRLIESLIGETVER---Y 231 Thermotoga maritima
P25499   157 HVENKTINFPT--KMDLSDIEKlvnILNDRLSGVPMDELNERIFKEVVMylrqh-iknyDNILDALRSTFHSTNHVeklF 233 Bacillus subtilis s...
P30727   159 MIKNSIIRVKS--NIENSSLERianILNSKLKGLTIEQINLEVINNIKKdlrey-ghifDCIMPNLYDILREADSTe-vY 234 Clostridium acetobu...
Q8KCD6   165 FVKTIVMELNA--EISRQKIDAvvdVLNERLPGLTLEEIRSTIAQRLSDfkgs--eelmNSIVSSADTLFDESSILeqlY 240 Chlorobium tepidum TLS
Q9RDD6   156 RVEQRMVDCPA--PFGEASLADlraRLNSRVAGRRFADVPALVEDLAEPfeaed-rgtvSTVLSTLLETLVEENEEr-lM 231 Streptomyces coelic...
P45556   158 HVEHVHLASDI--PFSNDKLNTisnFVTNKLTEFNQNLQDDIVSFVQSEqee----ifiNKLINTMNNHISNQSNSi--Y 229 Staphylococcus aure...
CAE77234 159 DVQNKMFNLK---DVALSDLKIaikLFSDVLVDVKLDEIDQYLNDLKHQlflsi-kqydYVLNTFINTILESKNEQk--e 232 Mycoplasma mycoides...
Q98R68   163 KVISKKLAMKD--SIVLDDLRIavrIFKERLIDTKVSELHEKTLALKPIlkisi-qnyeDILQEFIINIFDFEVSQt-nN 238 Mycoplasma pulmonis...
BAD04791 161 NVQHQNISLDQtkEISIYDLKDvvqVVNDLLTDKFLSEAANIIQSDFFKqtiakyicfqEQLIALFMEVFSSFASEn-lY 239 Onion yellows phyto...
P54306   171 QLFTDVLWLPE--QLPENSLKRiesFLQNYLRKHPSSVPLSQKEEDLGMtl-------yNEVVVRYLTRYCHFSEEd-lY 240 Chlamydia muridarum...
1STZ_A   232 LDAGLENLLKDEtL-T--LEDIRNLLEEVKDQKFLESLVGE------------GITVRIGREIGRKK---LEKFAVFSGK 293 Thermotoga maritima
P25499   234 FGGKINMLNQPE-FhD--ITRVRSLLSLIEKEQDVLKLVQSph---------tGISIKIGKENDYEE---MENCSLITAS 298 Bacillus subtilis s...
P30727   235 KEGTMNIFNYPE-FkD--IEKAKEFLSVID-DRRILDTLFNas---------gGVTVNIGNENSIKE---ARDFSVVSSV 298 Clostridium acetobu...
Q8KCD6   241 VSGTENIVDQPEfKqP---EKVRDIITMIEDKFGMARLVDNavpsalrqvsecEVAISIGTENRTGK---AADLTIVSSP 314 Chlorobium tepidum TLS
Q9RDD6   232 IGGTANLTRFGHdFp----LVIRPVLEALEEQVVLLKLLGEak--------dpGVTVRIGHENAHEG---LNSTSVVSVG 296 Streptomyces coelic...
P45556   230 MGGKVKLIDALNeSn---VSSIQPILQYIESNRIAELLQDIss---------pNINVKIGNEID-DS---LSDISIVTSQ 293 Staphylococcus aure...
CAE77234 233 THGMRYMLENPEfNdTnkLKNAVKLVEQLSPFDWFNIAYESnkn-------mnKIAIKIGNEID-QI---NDDISMIATE 301 Mycoplasma mycoides...
Q98R68   239 VYGKKNIILARDiKr----EDLTKIIKLIESTSIWQTIEDNlee-------eeNIKIEIRPDNS----------SFLSKK 297 Mycoplasma pulmonis...
BAD04791 240 FSGVSKMLEKPElSnP---EIIKKFMGLLERKELLKIMLNQd-----------SLSFKFSDGLQLTP---LKDCMILSIP 302 Onion yellows phyto...
P54306   241 QTGLSRLLKYEVfKdP---ETLAQGLSFFENRKHMCQLLNShlh-------kkAPTTFIGRELSDIVgnaDPSCAVITVP 310 Chlamydia muridarum...
1STZ_A   294 YFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYF 332 Thermotoga maritima
P25499   299 YSVDQKQIGSIAIIGPTRMNYSRVVSLLQHVTSDLSKAL 337 Bacillus subtilis subsp. subtilis str. 168
P30727   299 YKYNGRPLGTIGIIGPTRIPYSKVIKVIMEVVDQINNNL 337 Clostridium acetobutylicum ATCC 824
Q8KCD6   315 YFAG-KMIGRVGVMGPKRMNYEHAVRVVNYMAGCLSEAL 352 Chlorobium tepidum TLS
Q9RDD6   297 YGSGGEAVAKLGVVGPTRMDYPGTMGAVRAVARYVGQIL 335 Streptomyces coelicolor A3(2)
P45556   294 YHFDETLKGQIAVIGPTAMHYQNVIQLLNRIW------- 325 Staphylococcus aureus subsp. aureus Mu50
CAE77234 302 LKIG-NSSTVLTLVGPKRVDYNQVNQLMNLIIEIINTKE 339 Mycoplasma mycoides subsp. mycoides SC str. PG1
Q98R68   298 ISID-NKIREISVVGSKKMDYAKAKSALMLIEDLVEENK 335 Mycoplasma pulmonis UAB CTIP
BAD04791 303 FDVNPNEKGRIAVVGPSWMKYPKVIPILEYLAVHLSKLN 341 Onion yellows phytoplasma OY-M
P54306   311 YYMDRTPLGAFGVLGPMNLPYQQVFGTLSLFTERLKTIL 349 Chlamydia muridarum str. Nigg
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