3J2I,1G61,4ADX


Conserved Protein Domain Family
eIF-6

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TIGR00323: eIF-6 
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translation initiation factor eIF-6, putative
This model finds translation initiation factor eIF-6 of eukaryotes, which is a ribosome dissociation factor. It also finds a set of apparent archaeal orthologs, slightly shorter proteins not yet shown to act as initiation factors; these probably should be designated as translation initiation factor aIF-6, putative. [Protein synthesis, Translation factors]
Statistics
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PSSM-Id: 211569
Aligned: 7 rows
Threshold Bit Score: 297.105
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J2I_B   4 RTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGdaIPIVHTTIAGTRIIGRMTAGNRRGLLV----PtqttDQ 79  Saccharomyces cerevis...
Q60357   6 RKYFSGIPTIGVLALTTEEITLLPIFLDKDDVNEVSEVLE--TKCLQTNIGGSSLVGSLSVANKYGLLL----P----KI 75  Methanocaldococcus ja...
O28214   2 KVAVNGNPLIGLYAKVSEEYAVVGVNHEPLIDA-IQEKLD--VDVIVTKIAGSELVGAMMALNSRGAVV----S----DQ 70  Archaeoglobus fulgidu...
Q12522   4 RTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGdaIPIVHTTIAGTRIIGRMTAGNRRGLLVptqtT----DQ 79  Saccharomyces cerevis...
O27648   4 RINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNGALAVGNSNGFVV----S----NQ 73  Methanothermobacter t...
1G61_A   6 RKYFSGIPTIGVLALTTEEITLLPIFLDKDDVNEVSEVLE--TKCLQTNIGGSSLVGSLSVANKYGLLL----P----KI 75  Methanocaldococcus ja...
4ADX_I   4 RINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNGALAVGNSNGFVV----S----NQ 73  Methanothermobacter t...
3J2I_B  80 ELQHLRNSLPDS-------VKIQRVEERLSALGnVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYC 152 Saccharomyces cerevis...
Q60357  76 VEDEELDRIKNFlkennldLNVEIIKSKNTALG-NLILTNDKGALISPELKDFKKDIEDSLNVEVEIGTIAELPTVGSNA 154 Methanocaldococcus ja...
O28214  71 VLSSELRELEKS-------LDVLVIETPMTCFGnNLLINDRGGIANPEMESSVVEKVADFMDIELVKGTVGGIKTVGMAA 143 Archaeoglobus fulgidu...
Q12522  80 ELQHLRNSLPDS-------VKIQRVEERLSALGnVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYC 152 Saccharomyces cerevis...
O27648  74 AMDREIDALAAAg------VEAVRIPERFTAVGnLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMG 147 Methanothermobacter t...
1G61_A  76 VEDEELDRIKNFlkennldLNVEIIKSKNTALGnLILTNDKGALISPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGSNA 154 Methanocaldococcus ja...
4ADX_I  74 AMDREIDALAAAg------VEAVRIPERFTAVGnLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMG 147 Methanothermobacter t...
3J2I_B 153 SLSNQGGLVHPQTSVQDQEELSSLLQVPLVA-GTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRL 224 Saccharomyces cerevisiae S288c
Q60357 155 VVTNKGCLTHPLVEDDELEFLKSLFKVEYIGkGTANKGTTSVGACIIANSKGAVVGGDTTGPELLIIEDALGL 227 Methanocaldococcus jannaschi...
O28214 144 VVTNRGGLANPNINEWEAKKLQEVAGVEVLT-GTVNFGTDMVGSGLVANSKGYVVGRDTTGFELGIVEEALFP 215 Archaeoglobus fulgidus DSM 4304
Q12522 153 SLSNQGGLVHPQTSVQDQEELSSLLQVPLVA-GTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRL 224 Saccharomyces cerevisiae S288c
O27648 148 AATNRGALLNPQASSEEIGIIEDTLGVEADV-GTVNHGVTLIGACSVANSNGVLVGEETTGPELARIEEALGF 219 Methanothermobacter thermaut...
1G61_A 155 VVTNKGCLTHPLVEDDELEFLKSLFKVEYIGkGTANKGTTSVGACIIANSKGAVVGGDTTGPELLIIEDALGL 227 Methanocaldococcus jannaschi...
4ADX_I 148 AATNRGALLNPQASSEEIGIIEDTLGVEADV-GTVNHGVTLIGACSVANSNGVLVGEETTGPELARIEEALGF 219 Methanothermobacter thermaut...
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