Conserved Protein Domain Family
TIGR00304

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TIGR00304: TIGR00304 
TIGR00304 family protein
The member of this family from Pyrococcus horikoshii scores only 13.91 bits, largely because it is at least 15 residues shorter than other members of this family of small proteins and is penalized for not matching to the N-terminal section of the model. Cutoff scores are set so this hit is between noise and trusted cutoffs. [Hypothetical proteins, Conserved]
Statistics
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PSSM-Id: 213523
Aligned: 4 rows
Threshold Bit Score: 72.8604
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_010871142   2 IMKPILIFLGIILMFIGFFMITLGMILPSSQENyekp---------eteKTESSVEYSGIVMIGPIPIVFGNSPGLMILS 72  Methanocaldococ...
WP_010876239   5 MRGEVLIPAGVILIVAGILLTFIGGAITAGSQS----------------KDKGEVKAAGVVMIGPIPIIFGSDRNMAITG 68  Methanothermoba...
WP_010879768   8 IHSGIEITMNPFKVMIGFAVVMLGLTLLALS-------------------SAENVEYGGVVIIGPFPIVFGSSPDIAVLM 68  Archaeoglobus f...
WP_010879769   4 LLSLIIILLGIYLIISGLREPFWIEEWEDEEEDereyerrriserrksdEPKREVKGGGVVLIGPIPIVFGDSK-YAFLS 82  Archaeoglobus f...
WP_010871142  73 VLIAILMIIWMFL 85  Methanocaldococcus jannaschii
WP_010876239  69 VVLALILMVVAYL 81  Methanothermobacter thermautotrophicus
WP_010879768  69 VFVAlilillpll 81  Archaeoglobus fulgidus
WP_010879769  83 LLLAIILMLLSIA 95  Archaeoglobus fulgidus
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