1N2M


Conserved Protein Domain Family
TIGR00286

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TIGR00286: TIGR00286 
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arginine decarboxylase, pyruvoyl-dependent
The three copies present in Archeoglobus fulgidus, one of which is only half-length and excluded from the seed alignment, are very closely related and clearly arose by duplication after the separation from well-studied species. The other completed archaeal genomes each contain a single copy. The lone, weak (below trusted cutoff) hit to a non-archaeal sequence is to an uncharacterized protein of Chlamydia, with the greatest similarity in the amino-terminal half of the model. [Central intermediary metabolism, Polyamine biosynthesis, Energy metabolism, Amino acids and amines]
Statistics
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PSSM-Id: 211565
Aligned: 5 rows
Threshold Bit Score: 217.762
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1N2M_A  13 KLPNTVSLVAGSSEGETPLNAFDGALLNAGIGNVNLIRISAIMPPEAEIVP----LPKLPMGALVPTAYGYIISDVPGET 88  Methanocaldococcus ja...
O26956   2 VIVMKVAITSGAAEGPTKLNAFDNALLQAGIGDVNLIKVSSILPRNTRIVE----LPELEPGSIVNCVLSHMVSERRGDL 77  Methanothermobacter t...
O30240   3 LIPKEVFFVSGVGRHEDELVSFELALRDAGIERFNLVPVSSIVPPGCRVVSkeegLRKLSPGQIVFCVMARYASNVEGRE 82  Archaeoglobus fulgidu...
O27983   1 MLPRKVFFTKGVGRHTDPLVSFELALRDAGIEKFNLVTVSSIYPPYCEIVEaekgLSELFPGQIVFCVMSRMTSNEQGKR 80  Archaeoglobus fulgidu...
Q57764  13 KLPNTVSLVAGSSEGETPLNAFDGALLNAGIGNVNLIRISSIMPPEAEIVP----LPKLPMGALVPTAYGYIISDVPGET 88  Methanocaldococcus ja...
1N2M_A  89 ISAAISVAIPKDksLcGLIMEYEGKCSK-KEAEKTVREMAKIGFEMR-GWELDRIESIAVEHTVEKLGCAFAAAALWY 164 Methanocaldococcus jann...
O26956  78 ISAAVAVATSSD--F-GCVVENSSVNRDpEDVRSEAISMVRYMMSVR-GLEIKELIVEETNHVVEKCGAAVSAVVYLD 151 Methanothermobacter the...
O30240  83 IFASVGAAFPEDkdMnGYIAEHSGEWY--EGAEQHAKRLAEEMLKTQ-GSKVARTFAITARGKVKEFTTAVAAAVFVI 157 Archaeoglobus fulgidus ...
O27983  81 IFASVGAAIPPDpsLnGYLTEYHGYCNG-EDAGRHAEESAAYMLKTAfEIEPARTFNITVEADVEDCTTVVAAAVFVI 157 Archaeoglobus fulgidus ...
Q57764  89 ISAAISVAIPKDksLcGLIMEYEGKCSK-KEAEKTVREMAKIGFEMR-GWELDRIESIAVEHTVEKLGCAFAAAALWY 164 Methanocaldococcus jann...
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