2WB4


Conserved Protein Domain Family
GGDEF

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TIGR00254: GGDEF 
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diguanylate cyclase (GGDEF) domain
The GGDEF domain is named for the motif GG[DE]EF shared by many proteins carrying the domain. There is evidence that the domain has diguanylate cyclase activity. Several proteins carrying this domain also carry domains with functions relating to environmental sensing. These include PleD, a response regulator protein involved in the swarmer-to-stalked cell transition in Caulobacter crescentus, and FixL, a heme-containing oxygen sensor protein. [Regulatory functions, Small molecule interactions, Signal transduction, Other]
Statistics
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PSSM-Id: 272984
Aligned: 10 rows
Threshold Bit Score: 228.761
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2WB4_A       288 LAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDLPCR 366  Caulobacter cr...
P21830       209 MSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITL-RGSDVIGR 287  Escherichia coli
WP_010879949 263 MALTDPLTGLYNRRVFTEMAEKELAKAKRYGYNFSILMIDIDNFKKINDTYGHDVGDLVLKKISEILKRNV-RGADLVAR 341  Aquifex aeolicus
BAM51511     772 QSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHFKQFNDQLGHDAGDHVLKTIGRILQSNI-RGSDIACR 850  Bacillus subti...
WP_001373532  15 QAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSL-RAQDVAGR 93   Escherichia coli
WP_010873950 705 LTQIDGLTGVYNRRFFDQALEREWQIAFRETESLTLVMLDIDYFKLYNDTLGHQAGDHCLRIVAAILQESVhRTSDLVAR 784  Synechocystis ...
WP_010880241  88 RTYIDSLTGVYNRKFLEEIFKLEKEKYRTFRKEFCIIFIDLDNFKEVNDRYGHMEGDKVLKRVAELIKKSV-RKEDYVIR 166  Aquifex aeolicus
AAA87378     288 LAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDLPCR 366  Caulobacter cr...
WP_010908330 392 QAAHDTLTGLPNRTSILARIDEQRYCGAPDQLLTAVLFIDLDNFKGINDSLGHDVGDVVLQTAAQRLRAGL-RSRDVVGR 470  Mycobacterium ...
WP_010880189 436 YAMRDPLTFLYNQRTFWELLNYELERANRFERSLSLLLLDLDNFKVINDTYGHAVGDRVLREVARIISEKK-RKADVAAR 514  Aquifex aeolicus
2WB4_A       367 YGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAhgrE-MLNVTISIGVSATAG-EGDTPEALLKRADEGVYQAKAS 444  Caulobacter cr...
P21830       288 FGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNT---P-QVTLRISVGVAPLNP-QMSHYREWLKSADLALYKAKKA 362  Escherichia coli
WP_010879949 342 FGGEEFIVMLSNTNLNGAVKKAEQLRRMIEQTPIELPn-gE-KLRVTVSIGVSTYRG-H-ESLEELIKEADQALYEAKRK 417  Aquifex aeolicus
BAM51511     851 YGGEEMTIVLPQTSLEDTLVKAESLRQAIASMEVEYKg-kE-LGTLTVSLGVACYPN-HGETMVNIIQAADRALYQAKAA 927  Bacillus subti...
WP_001373532  94 VGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAk-sT-TIRISASLGVSSSEEtGDYDFEQLQSLADRRLYLAKQA 171  Escherichia coli
WP_010873950 785 YGGEEFALILPRTDLSGAVIVAQRIKTLMDAKAISHPt-sEiANYVTVSIGIHCAVPrPGLSLASWVKCADDALYQAKKR 863  Synechocystis ...
WP_010880241 167 YGGDEFVIIT-EAPRGDVLSIMSRLQDVIKIKYKEVE--------VTASIGSACFPN-DGKELEELIKKADERMYRIKKM 236  Aquifex aeolicus
AAA87378     367 YGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAhgrE-MLNVTISIGVSATAG-EGDTPEALLKRADEGVYQAKAS 444  Caulobacter cr...
WP_010908330 471 FGGDEFVALILGKITHTELSKVVDRMHAALSEPTYVAd--A-VLHLRASIGVVAIKGdDPRNIGQILRDADTAMYRAKLS 547  Mycobacterium ...
WP_010880189 515 YGGDEFAVIVIGANSNQALNLARRLKDAIESLSIPVSe-sE-TVSPRVSIGIASYPE-HALTSRDLFIIADSMLRKAKEE 591  Aquifex aeolicus
2WB4_A       445 GRNAVVGKA 453  Caulobacter crescentus CB15
P21830       363 GRNRTEVAA 371  Escherichia coli
WP_010879949 418 GKNRVEVFR 426  Aquifex aeolicus
BAM51511     928 GRNRVVMAD 936  Bacillus subtilis BEST7613
WP_001373532 172 GRNRVFASD 180  Escherichia coli
WP_010873950 864 GRNGYFVLE 872  Synechocystis sp. PCC 6803
WP_010880241 237 KNELLKLNK 245  Aquifex aeolicus
AAA87378     445 GRNAVVGKA 453  Caulobacter crescentus CB15
WP_010908330 548 GEGTSYYTD 556  Mycobacterium leprae
WP_010880189 592 GRSKIRVPT 600  Aquifex aeolicus
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