1NS5,1TO0


Conserved Protein Domain Family
tRNA_RlmH_YbeA

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TIGR00246: tRNA_RlmH_YbeA 
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rRNA large subunit m3Psi methyltransferase RlmH
This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA. [Protein synthesis, tRNA and rRNA base modification]
Statistics
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PSSM-Id: 129349
View PSSM: TIGR00246
Aligned: 5 rows
Threshold Bit Score: 235.974
Threshold Setting Gi: 51247684
Created: 7-Oct-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NS5_A         2 KLQLVAVGTKXPDWVQTGFTEYLRRFPKDXPFELIEIPAGKRGKNA---DIKRILDKEGEQXLAAAG-KNRIVTLDIPGK 77  Escherichia coli
P44470         2 KITLIAVGTKMPSWVTTGFEEYQRRFPKDMPFELIEIPAGKRGKNA---DIKRILEQEGKAMLAACG-KGKVVTLDIPGK 77  Haemophilus inf...
WP_003243164   2 NINIVTIGKLKEKYLKQGIEEYTKRLSAYAKIDIIELPDEKAPENLsdqDMKIIKDKEGDRILSKISpDAHVIALAIEGK 81  Bacillus subtilis
P05850         2 KLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNA---DIKRILDKEGEQMLAAAG-KNRIVTLDIPGK 77  Escherichia coli
1TO0_A         2 NINIVTIGKLKEKYLKQGIEEYTKRLSAYAKIDIIELPDEKAPENLsdqDXKIIKDKEGDRILSKISpDAHVIALAIEGK 81  Bacillus subtilis
1NS5_A        78 PWDTPQLAAELERWKLDGRD-VSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHR 154 Escherichia coli
P44470        78 PWTTPQLAEQLEAWKNDGRD-VCLLIGGPEGLSPECKAAAEQSWSLSPLTLPHPLVRVVVAESLYRAWSLTTNHPYHR 154 Haemophilus influ...
WP_003243164  82 MKTSEELADTIDKLATYGKSkVTFVIGGSLGLSDTVMKRADEKLSFSKMTFPHQLMRLILVEQIYRAFRINRGEPYHK 159 Bacillus subtilis
P05850        78 PWDTPQLAAELERWKLDGRD-VSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHR 154 Escherichia coli
1TO0_A        82 XKTSEELADTIDKLATYGKSkVTFVIGGSLGLSDTVXKRADEKLSFSKXTFPHQLXRLILVEQIYRAFRINRGEPYHK 159 Bacillus subtilis
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