Conserved Protein Domain Family
udk

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TIGR00235: udk 
uridine kinase
Model contains a number of longer eukaryotic proteins and starts bringing in phosphoribulokinase hits at scores of 160 and below [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]
Statistics
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PSSM-Id: 272977
Aligned: 7 rows
Threshold Bit Score: 273.11
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P44533         1 MSN--PSc--IIIAITGASASGKssiaS----TVHKELCNELGC-QEIGIITEDSYYKDQ--SHLEMTERVKTNYDHPNS 69  Haemophilus inf...
O32033         1 MGK--NP---VVIGIAGGSGSGK----T----SVTRSIYEQFKG-HSILMIQQDLYYKDQ--SHLPFEERLNTNYDHPLA 64  Bacillus subtil...
P75217         1 MDS--KKg--ILVAIGGGSCSGK----T----TIADMIYQLLRKkLKVAILPQDNYYKPY--KNKSMAQRKAINFDHPDA 66  Mycoplasma pneu...
P47622         1 MD---EKg--ILVAISGGSCSGK----T----TVAEMIYQLLSKkLKVAIICQDNYYKSY--KNKPLLKRKTINFDHPDA 65  Mycoplasma geni...
P27515        47 SRYipPWttpYIIGIGGASGSGK----T----SVAAKIVSSINv-PWTVLISLDNFYNPLgpEDRARAFKNEYDFDEPNA 117 Saccharomyces c...
WP_001295424   1 MTD--QShqcVIIGIAGASASGK----SliasTLYRELREQVGD-EHIGVIPEDCYYKDQ--SHLSMEERVKTNYDHPSA 71  Enterobacteriaceae
WP_002655979   1 MAK--------IIGISGGSGSGK----T----TVVSKISEFIP---EFVLISQDNYYKSV--GDYEH-EFSKVNFDHPDA 58  Lyme disease sp...
P44533        70 MDRDLLIQHLKNLKNGSAVDVPVYSYVEHTR-TNETTHFTPKRIVILEGILLLTDERVRQLADISVFVDTPLDICFIRRL 148 Haemophilus inf...
O32033        65 FDNDYLIEHIQDLLNYRPIEKPIYDYKLHTR-SEETVHVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRI 143 Bacillus subtil...
P75217        67 FDWKLLWSHLDNLLMGKTVAVPMYDYVNYTR-KKETIEIGPLNVVILEGLMPWFDERIAKLCKLKIFVEATGEERLIRRI 145 Mycoplasma pneu...
P47622        66 FDWKLLRSHIEDLLNGSIVNVPLYDYINYTR-AKKTAKIGPIDVVILEGLMPWFDEKLSRLSKLKIFIETNGEERLIRRI 144 Mycoplasma geni...
P27515       118 INLDLAYKCILNLKEGKRTNIPVYSFVHHNRvPDKNIVIYGASVVVIEGIYALYDRRLLDLMDLKIYVDADLDVCLARRL 197 Saccharomyces c...
WP_001295424  72 MDHSLLLEHLQALKRGSAIDLPVYSYVEHTR-MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRI 150 Enterobacteriaceae
WP_002655979  59 FDNNLFYEHLKNLKKNSPIDMPLYDFINHKR-QLKTVLVVPTPVVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRL 137 Lyme disease sp...
P44533       149 QRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYADIVIPRGGKNRIAINMLKAQILHLLN 211 Haemophilus influenzae Rd KW20
O32033       144 MRDINERGRSIDSVIEQYVSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTKIQTILE 206 Bacillus subtilis subsp. subtili...
P75217       146 ERDWE-RGRDVASIIKQWREAVSPMYEIFVEKMKQKADLIIPWSERHEVSTNVLDFAIEHLFR 207 Mycoplasma pneumoniae M129
P47622       145 ERDWQ-RGRNIDSIIKQWREIVAPMYEIFVEKMKRNADLILPWSQRREVSTSVLDVAIEHLFH 206 Mycoplasma genitalium G37
P27515       198 SRDIVSRGRDLDGCIQQWEKFVKPNAVKFVKPTMKNADAIIPSMSDNATAVNLIINHIKSKLE 260 Saccharomyces cerevisiae S288c
WP_001295424 151 KRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE 213 Enterobacteriaceae
WP_002655979 138 RRDISKRGRTVESVIDQYLNTTRWGYYRFIEPTKEYADLIIPEGGHNDKALYVLSTFLKSLSK 200 Lyme disease spirochete
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