3PRH,2YY5,2IP1,3JXE,1R6U


Conserved Protein Domain Family
trpS

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TIGR00233: trpS 
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tryptophanyl-tRNA synthetase
This model represents tryptophanyl-tRNA synthetase. Some members of the family have a pfam00458 domain amino-terminal to the region described by this model. [Protein synthesis, tRNA aminoacylation]
Statistics
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PSSM-Id: 272975
Aligned: 21 rows
Threshold Bit Score: 359.722
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3PRH_A  34 MKQTIFSGIQPSG-SVTLGNYIGAMKQFVEL-QHDYNSYFCIVDQHAITVPQd-rLE--LRKNIRNLAALYLAVGLDPEK 108 Bacillus subtilis
P56396   2 HKKRVFSGIQPTG-QIHLGNYLGAIKHWVEM-QDEYENLFCVVNSHAITLPI---DPafLKSQSYELVKLLLACGIDPKQ 76  Helicobacter pylori 2...
Q12109 101 KPFFLYTGRGPSSdSMHLGHMIPFVFTKWLQeVFDVPLVIELTDDEKFLFKHkltINdvKNFAREN-AKDIIAVGFDPKN 179 Saccharomyces cerevis...
Q09692  81 KPFYLYTGRGPSSdSMHLGHMIPFMFCKWLQdVFQVPLVIQLTDDEKFLFKQgvsLEdcQRFAREN-AKDIIAVGFDPKK 159 Schizosaccharomyces p...
P23381 154 KPFYLYTGRGPSSeAMHVGHLIPFIFTKWLQdVFNVPLVIQMTDDEKYLWKDl-tLDqaYSYAVEN-AKDIIACGFDINK 231 human
Q8U453  72 KGFFLYTGRGPSG-PMHIGHIIPFFATKWLQeKFDVNLYIQITDDEKFLFKEnltFEdtKYWAYQN-ILDIIAVGFDPDK 149 Pyrococcus furiosus D...
Q58810  65 KEFAVVSGMMPSG-KMHFGHKMVVDLLKFYQ-KYTDNINIPIADLEAYWARNm-sFEttKELALNEYITNYIALGLDPEK 141 Methanocaldococcus ja...
O26352  60 EDFAVVTGMMPSG-RMHIGHKMIVDQLRWYD-RMGAEIFIPIADMEAYSARGv-dFEdsRRIAIEEYIAGYIALGLDLEK 136 Methanothermobacter t...
2IP1_A 101 KPFFLYTGRGPSSdSMHLGHMIPFVFTKWLQeVFDVPLVIELTDDEKFLFKHkltINdvKNFAREN-AKDIIAVGFDPKN 179 Saccharomyces cerevis...
3JXE_A  72 rgFFLYTGRGPSG-PMHIGHIIPFFATKWLQeKFGVNLYIQITDDEKFLFKEnltFDdtKRWAYDN-ILDIIAVGFDPDK 149 Pyrococcus horikoshii
3PRH_A 109 --ATLFIQSEVP----AHAQAGWMMQCVAYIGELERMTQFKDKS--KgNEAVVSGLLTYPPLMAADILLY-GTD------ 173 Bacillus subtilis
P56396  77 --SGLFIQSEVD----EHPALAWLLNCQVSMGEMQRMTQFKDKSlkN-PKSVNVGLFNYPILMASDILLY-QSD------ 142 Helicobacter pylori 2...
Q12109 180 --TFIFSDLQYMg--gAFYETVVRVSRQITGSTAKAVFGFNDSD--------CIGKFHFASIQIATAFPS-SFPnvlglp 246 Saccharomyces cerevis...
Q09692 160 --TFIFMNSTYVg--gAFYQNVVRIAKCITANQSKACFGFTDSD--------SIGKIHFASIQAAPSFSS-SFPhifnga 226 Schizosaccharomyces p...
P23381 232 --TFIFSDLDYMgmssGFYKNVVKIQKHVTFNQVKGIFGFTDSD--------CIGKISFPAIQAAPSFSN-SFPqifrdr 300 human
Q8U453 150 --TFIFQNSEFT----KIYEMAIPIAKKINFSMAKAVFGFTEQS--------KIGMIFFPAIQAAPTF----FEkk---- 207 Pyrococcus furiosus D...
Q58810 142 --INVYLQSKYq----KVKDLALILSKRTNWSEMKAIYGFKGET--------NIGHVFAPIVQVADILHP-QLDenlsp- 205 Methanocaldococcus ja...
O26352 137 dnIHVYLQSENl----MVEDLAYVLAGKVNFNELRAIYGFTGST--------SMAHMYAPIIQVSDILHP-QLDelgg-- 201 Methanothermobacter t...
2IP1_A 180 --TFIFSDLQYMg--gAFYETVVRVSRQITGSTAKAVFGFNDSD--------CIGKFHFASIQIATAFPS-SFPnvlglp 246 Saccharomyces cerevis...
3JXE_A 150 --TFIFQNSEFT----KIYEMAIPIAKKINFSMAKAVFGFTEQS--------KIGMIFFPAIQIAPTFFErKRC------ 209 Pyrococcus horikoshii
3PRH_A 174 -----LVPPGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIPKVgARIMSLNDplKKMSKSDPNqkAYITLLDEPKQLE 248 Bacillus subtilis
P56396 143 -----LVPVGEDQKQHLELTRNIAEKFNRDFGNCFKVPEPLIAKVgARVMGLDDpkVKMSKSHQGanHAIFLLDEPDIIV 217 Helicobacter pylori 2...
Q12109 247 dktpcLIPCAIDQDPYFRVCRDVADKLK------YSKPALLHSRFfPALQGSTT---KMSASDDT--TAIFMTDTPKQIQ 315 Saccharomyces cerevis...
Q09692 227 kdipcLIPCAIDQDPYFRLTRDVSGRLK------FKKPALLHSRFfPALQGPQS---KMSASKDS--SAIFMTDTPNKIK 295 Schizosaccharomyces p...
P23381 301 tdiqcLIPCAIDQDPYFRMTRDVAPRIG------YPKPALLHSTFfPALQGAQT---KMSASDPN--SSIFLTDTAKQIK 369 human
Q8U453 208 ---rcLIPAAIDQDPYWRLQRDFAESLG------YYKTAALHSKFfPPLTGLEG---KMSASKPE--TAIYLTDNPEEAG 273 Pyrococcus furiosus D...
Q58810 206 epkpvVVPVGIDQDPHIRLTRDIANRAKE-FK--FIPPSSTYHRFmTGLLG--G---KMSSSKPE--TAIFLTDDEKTVK 275 Methanocaldococcus ja...
O26352 202 -prpvIVPVGPDQDPHIRLTRDIAARFRDRYG--FILPSSTYHRFmGGLTG--G---KMSSNRPK--SAIFLSDTPEEAE 271 Methanothermobacter t...
2IP1_A 247 dktpcLIPCAIDQDPYFRVCRDVADKLK------YSKPALLHSRFfPALQG-ST--TKMSASDDT--TAIFMTDTPKQIQ 315 Saccharomyces cerevis...
3JXE_A 210 -----LIPAAIDQDPYWRLQRDFAESLG------YYKTAALHSKFvPSLTSLSG---KMSASKPE--TAIYLTDSPEDVE 273 Pyrococcus horikoshii
3PRH_A 249 KKIKSAVTDSEGIVKFDKENKPGVSNLLTIYSILG-NTTI-------EELEAKYEGKg-YGEFKGDLAEVVVNALKPIQD 319 Bacillus subtilis
P56396 218 KKIKKAATDSMGVIAFDE-KREGIFNLLNIYMLLS-NESP-------ENIEERFKNKg-YGDFKKELAEVMIQALKPIQE 287 Helicobacter pylori 2...
Q12109 316 KKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLS-FFKDddv-flkECYDKYKSGEllSGEMKKLCIETLQEFVKAFQE 393 Saccharomyces cerevis...
Q09692 296 NKINRHAFSGGGATIEIHREKGGNPDVDVAYQYLS-FFLDdde-klkQLYNTYKAGTlsTGEMKGECIKLLQQFVSDFQA 373 Schizosaccharomyces p...
P23381 370 TKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLT-FFLEddd-kleQIRKDYTSGAmlTGELKKALIEVLQPLIAEHQA 447 human
Q8U453 274 KKIWKFALTGGQPTLKEQREKGGNPEKCVVFKWLE-IFFEpddkklmERYYACKNGEllCGECKRYLIQRVQEFLKEHQE 352 Pyrococcus furiosus D...
Q58810 276 KKIFS-AKTGGRETLEEHKKYGGVPEECVVYELFL-YHLIlddkelaEIYQKCRSGEltCGKCKKMAYERVVEFLKDLKE 353 Methanocaldococcus ja...
O26352 272 AKIRN-AKTGGRETLKEQRELGGVPEECIIYETLL-YHMSgsdsrleEIYESCRNGTlmCGECKNNTAEFIRKFFEELSV 349 Methanothermobacter t...
2IP1_A 316 KKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLS-FFKDddv-flkECYDKYKSGEllSGEMKKLCIETLQEFVKAFQE 393 Saccharomyces cerevis...
3JXE_A 274 KKVWKFTLTGGRPTLKEQREKGGEPEKCVVFKWLEiFFEEddk-klkERYYACKNGEltCGECKRYLISKIQEFLKEHQR 352 Pyrococcus horikoshii
3PRH_A 320 RYYELIEsEELDRILDEGAERANRTANKMLKKMENAMGL 358 Bacillus subtilis
P56396 288 RYKEISD-DEVKAILNGGAEKARPLARATYQKAKELMGL 325 Helicobacter pylori 26695
Q12109 394 RRAQVDE-ETLDKFMVP-HKLVWGEKERLVAPKPKtkqe 430 Saccharomyces cerevisiae S288c
Q09692 374 ARSKVDE-ATLDMFMDGSRKLEW---------------- 395 Schizosaccharomyces pombe 972h-
P23381 448 RRKEVTD-EIVKEFMTP-RKLSFDFQ------------- 471 human
Q8U453 353 KR-KKAE-KLVEKFKYT-GKLAQEQWNKAIPDPLKk--- 385 Pyrococcus furiosus DSM 3638
Q58810 354 KR-EQAK-EIAVKILEGKY-------------------- 370 Methanocaldococcus jannaschii DSM 2661
O26352 350 KR-EKAL-PAARRILEG---------------------- 364 Methanothermobacter thermautotrophicus str. Delta H
2IP1_A 394 RRAQVDE-ETLDKFMVP-HKLVWGEKERLVAPKPKtkqe 430 Saccharomyces cerevisiae S288c
3JXE_A 353 RR-KKAE-KLVEKFKYTG-KLAQEMWNEAIPEPLKrshh 388 Pyrococcus horikoshii
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