4C2D


Conserved Protein Domain Family
prc

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TIGR00225: prc 
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C-terminal peptidase (prc)
A C-terminal peptidase with different substrates in different species including processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein in E.coli E.coli and H influenza have the most distal branch of the tree and their proteins have an N-terminal 200 amino acids that show no homology to other proteins in the database. [Protein fate, Degradation of proteins, peptides, and glycopeptides, Protein fate, Protein modification and repair]
Statistics
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PSSM-Id: 272970
Aligned: 10 rows
Threshold Bit Score: 430.628
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4C2D_A        21 SNEYVEKVDREK---LLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMEDG---------------- 81  Bacillus subtil...
P45306       202 RYNLAIRRLTQTkadDIVQIYLNAFAREIDPHTSYLSPRTAKSFNESINLSLEGIGTTLQSEDD---------------- 265 Haemophilus inf...
Q55669        64 REKYVKRPLRNRe--ETYTAIEEMLATLDEPFTRLLRPEQYGNLQVTTTGELSGVGLQININPEt--------------n 127 Synechocystis s...
WP_010872128  69 RQDYLTRDYKNQe--EAYTAIREMLEKLNDPYTRFMSPDEFQSMRIDTSGELTGVGIQITQDQDt--------------k 132 Synechocystis s...
WP_000243678  59 VSEIEKKYVDKIsisEIMTKAIEGLLSNLDAHSAYLNEKKFKEFQAQTEGEFGGLGITVGMRDG---------------- 122 Helicobacter py...
WP_017697143  55 KSDYYQKTDDDK---LVDGAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEGIGAQVEEKDG---------------- 115 Bacillus subtilis
WP_015251120  58 SNEYVEKVDREK---LLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMEDG---------------- 118 Bacillus subtilis
WP_002556955  53 KENYVDPVSDEV---IFEGALKGIFQSLGDPYSQYLTKKDLEEISKTTVGDYVGIGISIIKKMHsqdkqdkakdfdpnsa 129 Lyme disease sp...
WP_010871361  92 RQELLGRNYQDNa--EAYRQIGRILKDLNDPYTRFLSPEEFAILSSQTSGEASGVGIRVLMDKRs--------------s 155 Synechocystis s...
P23865       194 RYKFAIRRLAQTnseDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDD---------------- 257 Escherichia col...
4C2D_A        82 KIIIVSPFKKSPAEKAG-LKPNDEIISINGE-----SMAGKDLNHAVLKIRGKKGSSVSMKIQRPg---TKKQLSFRIKR 152 Bacillus subtil...
P45306       266 EISIKSLVPGAPAERSKkLHPGDKIIGVGQAtgdieDVVGWRLEDLVEKIKGKKGTKVRLEIEPAkg-gKSRIITLVRDK 344 Haemophilus inf...
Q55669       128 QLEIMAPLAGSPAEEAG-LQPHDQILAIDGV-----DTQTLSLDEAAARMRGPKNTKVSLEILSAg---TEVPQEFTLTR 198 Synechocystis s...
WP_010872128 133 KIVVVAPIEDTPAYNAG-ILSKDVITKIDGK-----STDGMEVDDAVKLIRGKPGTSVVLTIER-----EGQAIEYPLTR 201 Synechocystis s...
WP_000243678 123 VLTVIAPLEGTPAYKAG-VKSGDNILKINNE-----STLSMSIDDAINLMRGKPKTPIQITVVRKn---EPKPLVFNIIR 193 Helicobacter py...
WP_017697143 116 EILIVSPIKGSPAEKAG-IKPRDQIIKVNGK-----SVKGMNVNEAVALIRGKKGTKVKLELNRAg----VGNIDLSIKR 185 Bacillus subtilis
WP_015251120 119 KIIIVSPFKKSPAEKAG-LKPNDEIISINGE-----SMAGKDLNHAVLKIRGKKGSSVSMKIQRPg---TKKQLSFRIKR 189 Bacillus subtilis
WP_002556955 130 CVSIVTPFEGGPAYKAG-IKSGDCITAVDGK-----SVYSMEVDQVVDLLKGKEGTKVKVSILRG----KNLTLDFELTR 199 Lyme disease sp...
WP_010871361 156 DLVVVDVMRGTPALKAG-IRPGDRIVRINGQ-----PAALMSLEQATEAIQGEIGTELSLQLSRP----KSGVFSVTLKR 225 Synechocystis s...
P23865       258 YTVINSMVAGGPAAKSKaISVGDKIVGVGQTgkpmvDVIGWRLDDVVALIKGPKGSKVRLEILPAgkgtKTRTVTLTRER 337 Escherichia col...
4C2D_A       153 AEIPLETVFASEKKVQ-GHSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVIDVRGNPGGYLQSVEEILKHFVTKDqP 231 Bacillus subtil...
P45306       345 VRIEDQAAKLTFEKVS-GKNIAVIKIPSFYIGLTEDVKKLLVKLENQKAEALIVDLRENGGGALTEAVALSGLFITDG-P 422 Haemophilus inf...
Q55669       199 QLISLSPVAAQLDDSRpGQSVGYIRLSQFSANAYKEVAHALHQLEEQGADGYILDLRNNPGGLLQAGIDIARLWLPES-T 277 Synechocystis s...
WP_010872128 202 TLIEIHPVRAQVEDIN-GARVGYIRLNQFSAQASEEMRQAVQKLEKENVVGYIFDLRSNPGGLLYSSVDIARIWLDEG-G 279 Synechocystis s...
WP_000243678 194 DIIKLPSVYVKKIKET---PYLYVRVSGFDKNVTKSVLEGLKA--NPKAKGIVLDLRGNPGGLLNQAVGLSNLFIKEG-V 267 Helicobacter py...
WP_017697143 186 DTIPVETVYSEMKDNN----IGEIQITSFSETTAKELTDAIDSLEKKGAKGYILDLRGNPGGLMEQAITMSNLFIDKG-K 260 Bacillus subtilis
WP_015251120 190 AEIPLETVFASEKKVQ-GHSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVIDVRGNPGGYLQSVEEILKHFVTKD-Q 267 Bacillus subtilis
WP_002556955 200 EKIEIQTIKYDVINSD----IGYIRIVSFNPHTSVDFRKALDNLKNKNIKSLILDLRLNTGGYFQAAIKMADDILSKG-I 274 Lyme disease sp...
WP_010871361 226 ENIEIDSVTYNVKEEG-ELRVGYIRLDEFSSHSAEQMEKAITELNKSRISGYVLDLRGNPGGLLLSSIDIARLWLNRG-E 303 Synechocystis s...
P23865       338 IRLEDRAVKMSVKTVG-KEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAG-P 415 Escherichia col...
4C2D_A       232 -YIQIAERNGDKK-RYFSTLTHKK--AYPVNVITDKGSASASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMG----- 302 Bacillus subtil...
P45306       423 -VVQVRDAYQRIRvHEDDDATQQY--KGLLFVMINRYSASASEIFAAAMQDYRRGIIIGQNTFGKGTVQQSRSLNfiydl 499 Haemophilus inf...
Q55669       278 -IVYTVNRQGTQE-SFTANGEAAT--DRPLVVLVNQGTASASEILAGALQDNQRATLVGEKTFGKGLIQSLFELS----- 348 Synechocystis s...
WP_010872128 280 -IVSTVDRRGEVE-QQSANKRQLS--NRPLVVLVDGGSASASEIVSGALQDNQRAVIVGTKTFGKGLVQSVRELG----- 350 Synechocystis s...
WP_000243678 268 -LVSQKGKNKEENlEYKANGRAPYt-NLPIAVLVNGGSASASEIVAGALQDHKRAVIIGEKTFGKGSVQMLLPVN----- 340 Helicobacter py...
WP_017697143 261 nIMQVEYKNGSKE-VMKAEKERKV--TKPTVVLVNDGTASAAEIMAAALHESSNVPLIGETTFGKGTVQTAKEYD----- 332 Bacillus subtilis
WP_015251120 268 pYIQIAERNGDKK-RYFSTLTHKK--AYPVNVITDKGSASASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMG----- 339 Bacillus subtilis
WP_002556955 275 -IVSTKSRNSSKPiDYKASSKQVLpsNIKIVALIDRSSASASEVFVGALKDNKRAYIIGEKSYGKGLIQHVVPFY----- 348 Lyme disease sp...
WP_010871361 304 -IVSTIDRRGGDR-HFSANGRSLT--DLPLVVLVNERSASASEILAGALKEQGRATVVGTATYGKGTVQSVNTLS----- 374 Synechocystis s...
P23865       416 -IVQVRDNNGKVReDSDTDGQVFY--KGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNriydq 492 Escherichia col...
4C2D_A       303 DGSN-------IKLTLYKWLTPNGNWIHKKGIEPTIAIKQPDYfsagP-L---QLKEPLKVDMNNED 358 Bacillus subtilis subsp. sub...
P45306       500 DQSPlg----vLQYTIQKFYRVNGGSTQLKGVAADINFPEIID----A-K---EYGEDKEDNALAWD 554 Haemophilus influenzae Rd KW20
Q55669       349 DGAG-------IAVTVAKYETPQHHDIHKLGIMPDEVVEQPLI----S------FAEITS----PAD 394 Synechocystis sp. PCC 6803 s...
WP_010872128 351 DGSG-------MAVTIAKYLTPNGRDINKHGIDPDVEVELTDA----QrK---ELQQNREKVGTLED 403 Synechocystis sp. PCC 6803
WP_000243678 341 KDEA-------IKITTARYYLPSGRTIQAKGITPDIVIYPGKV----P-----ENENKFSLKEADLK 391 Helicobacter pylori
WP_017697143 333 DGST-------VKLTVAKWLTADGEWIHKKGIKPQVKAELPDY----A-Kl--PYLDADKTYKsgdt 385 Bacillus subtilis
WP_015251120 340 DGSN-------IKLTLYKWLTPNGNWIHKKGIEPTIAIKQPDY----FsAgplQLKEPLKVDMNNED 395 Bacillus subtilis
WP_002556955 349 -TGG-------FKITSSKYYTPSGKSIHKVGIEPDLEIKSPDF----S-------EEEALIYKEIFD 396 Lyme disease spirochete
WP_010871361 375 DGSG-------LAVTIARYYPPSGTDINRKGISPDIHLDISND----TkL---QFRNDPELMATEID 427 Synechocystis sp. PCC 6803
P23865       493 MLRPewpalgsVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNE----E-T---ETGEKFEDNALPWD 551 Escherichia coli K-12
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