Conserved Protein Domain Family
ispH_lytB

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TIGR00216: ispH_lytB 
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
The IspH protein (previously designated LytB) has now been recognized as the last enzyme in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Statistics
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PSSM-Id: 272965
Aligned: 10 rows
Threshold Bit Score: 337.019
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q55643  29 TILLAEAFGFCWGVERAVAMAYETRQh-FPGDRLWITNEIIHNPSVNQRLREMEVNFIdvvngEKDFSGVAKGD------ 101 Synechocystis sp. PCC...
P58675   4 NVILAKNAGFCFGVKRAVDEAIKYQK--EFGKKIYTLGPLIHNNDVVNYLEDNNIFAIe----LSDADSLKKGD------ 71  Clostridium perfringe...
O67625   3 DIIIAEHAGFCFGVKRAVKLAEESLK--ESQGKVYTLGPIIHNPQEVNRLKNLGVFP-------SQGEEFKEGD------ 67  Aquifex aeolicus VF5
P94644   2 IIELAKNYGFCFGVKRAIKKAEQIKD--A-----ATIGPLIHNNEEISRLQKNFNVKTl-----ENIQALSNEK------ 63  Campylobacter jejuni
Q9X1F7   2 KIVVAKNIGFCFGVERAIRTVEELLD--E-GKKVVTDGEIVHNKQVMEQLTKKGLKVS-------S--EMTDGE------ 63  Thermotoga maritima MSB8
O83558   9 VITRAHTLGYCGGVRMAVRMAEHARA--HHRGSVYTLGPLVHNPVTLARLRARGIECLdpahlSFALHAPAAPGaaphav 86  Treponema pallidum su...
P54473   2 DVIKISPRGYCYGVVDAMVIAKNASLdkSLPRPIYILGMIVHNKHVTDAFEEEG-IFT-----LDGSNRLDILKqvd--- 72  Bacillus subtilis sub...
O84867   3 KIILCSPRGFCAGVIRAIQTVEVALE--KWGRPIYVKHEIVHNRHVVDKLREKG-AIF-----IEDLQEVPRNS------ 68  Chlamydia trachomatis...
Q9RSG0   4 RIYLAKPRGFCAGVVMAIQAVEKAAV--REDKPVTVYHSIVHNHTVVERLSEGGRVHF-----VEDLDAVDALPds---- 72  Deinococcus radiodura...
Q8YFR1   9 EIRLCGPRGFCAGVDRAIQIVVLALK--KYGAPVYVRHEIVHNRYVVEGLQARG-AIF-----VEELDEIPAAHrn---- 76  Brucella melitensis b...
Q55643 102 ------VVILPAFGASVEEMQLLNDRE-CtIVDTTCPWVSKVWNSVEKHKKKEHTSIIHG-KYNHEETIATSSfagTYLI 173 Synechocystis sp. PCC...
P58675  72 ------VVLIRSHGVKESVIKDLTDKGlI-VKNATCPYVTNIQLKVKKCYEQGYKIIIVG-DKNHPEVIGING---WCND 140 Clostridium perfringe...
O67625  68 ------TVIIRSHGIPPEKEEALRKKGlK-VIDATCPYVKAVHEAVCQLTREGYFVVLVG-EKNHPEVIGTLGylrACNG 139 Aquifex aeolicus VF5
P94644  64 ------KAIIRTHGITKQDLEELRKKDiE-IFDATCPFVTKPQQICEQMSKEGYEVVIFG-DENHPEVKGVKS---YVST 132 Campylobacter jejuni
Q9X1F7  64 ------VFVVRAHGIPKDRLEELKKIFpE-VVDLTCPIVSQLFKTAQRYAKE-RKVIVFG-KEDHPEMVALRG-----YA 129 Thermotoga maritima MSB8
O83558  87 eektarTVVIRAHGVAPEVYEALERSGaQ-VVDATCPRVKESQRRAQGFAAQGLHVILAG-DRNHGEIVGIEG---YVRA 161 Treponema pallidum su...
P54473  73 ----kgTVIFTAHGVSPEVRRIAEEKGlV-AIDATCPDVTKTHNLILEMKEKGYHVIYIG-KKGHPEPEGAVG---VAPE 143 Bacillus subtilis sub...
O84867  69 ------RVIFSAHGVPPSVREEAEERGlI-AIDATCGLVTKVHSAVKMYAKKGYHIILIG-KRKHVEIIGIRG---EAPD 137 Chlamydia trachomatis...
Q9RSG0  73 ----gdTVIFSAHGISPAVRERARSLGlS-TIDATCPLVTKVHTEAKKYAREGYTILLIGdSAGHQEVIGTRG---EAPE 144 Deinococcus radiodura...
Q8YFR1  77 -----qPVVFSAHGVPKSVPADAEAKNlF-YLDATCPLVSKVHKQAMRHQRLGRHVILIG-HSGHPEVIGTMG---QLPD 146 Brucella melitensis b...
Q55643 174 VlnmaeAQKVCDYilhggdrqEFLDYFAnahsagfdpdQDlvrLGVANQTTMLKSETEMIGKLFEKTllQKYGPIElnnh 253 Synechocystis sp. PCC...
P58675 141 S-----AIITNGK--------TELENIP----------AK---VCVVSQTTEKKETWNKVLNEIVRA--SKEIVAF---- 188 Clostridium perfringe...
O67625 140 K-----GIVVETL--------EDIGEALk--------hER---VGIVAQTTQNEEFFKEVVGEIALW--VKEVKVI---- 189 Aquifex aeolicus VF5
P94644 133 K-----AYVVLDK--------KELQNIKl--------pNK---IAVVSQTTKKPEHFMEIVNFLILK--TKEVRVF---- 182 Campylobacter jejuni
Q9X1F7 130 P-----AIVTKVP--------FKLEEKK---------------VVFLSQTTSSLEEYKEFVAAMIRMneFEEAVFL---- 177 Thermotoga maritima MSB8
O83558 162 GaaqacSHLPGGApdg---mlPQVQCFVvqnareaaalPClarAALLAQTTITQGEYDAIAAAARTRvrELTVAR----- 233 Treponema pallidum su...
P54473 144 I-----VHLVETE--------EDVKNLDiq-------sEK---LIVTNQTTMSQWDVHDIMELVKEKy--pHVEYH---- 194 Bacillus subtilis sub...
O84867 138 Q-----ITVVENI--------AEVEALPfs-------aQDp--LFYVTQTTLSMDDAADIVAALKARypRIFTLPS---- 191 Chlamydia trachomatis...
Q9RSG0 145 N-----TILVGVLgktg-pglNDPHAVQvp-------dPEr--LVVLTQTTLSVDDTRKTVDILKARfpALVVPPS---- 205 Deinococcus radiodura...
Q8YFR1 147 Ga----VTLIETV--------EDAHTCHfd-------dEDn--LGFVTQTTLSVDDTAGIIKELQARfpNLAAPAA---- 201 Brucella melitensis b...
Q55643 254 fmsfNTICDATQERQDAMFDLVEEdLSLMVVIGGFNSSNTTHLQEIAVEHGIP-SVHIDSGDRIGpgnrvehkplgkdle 332 Synechocystis sp. PCC...
P58675 189 ----NTICSATDVRQKSVQELSKE-ADLVFVIGGKNSSNTTKLYEICKKECPK-SYHIENVKELD--------------- 247 Clostridium perfringe...
O67625 190 ----NTICNATSLRQESVKKLAPE-VDVMIIIGGKNSGNTRRLYYISKELNPN-TYHIETAEELQ--------------- 248 Aquifex aeolicus VF5
P94644 183 ----NTICDATFKNQDAIKELSLK-SDVMVVVGGKNSANTKQLFLIAKTNCED-SYLIETEEELK--------------- 241 Campylobacter jejuni
Q9X1F7 178 ----NTICPVTVNREREVEELSKI-CDLSIVVGGKHSSNTGKLFRIASKHS-K-TIWIESPDELP--------------- 235 Thermotoga maritima MSB8
O83558 234 -----TICAATARRQAALRALAPT-VEALLVIGGAHSANTQRLLHTARETSLP-TWLVERVEDIP--------------- 291 Treponema pallidum su...
P54473 195 ----QEICLATQVRQEAVSEQAKK-ADLTIVVGDPKSNNSNRLAQVSEEIAGTkAYRIGDLSELK--------------- 254 Bacillus subtilis sub...
O84867 192 ----SSICYATQNRQGALRNILPQ-VDFVYVIGDTQSSNSNRLREVAERRGVT-ARLVNHPDEVT--------------- 250 Chlamydia trachomatis...
Q9RSG0 206 ----EDLCYATKNRQDAVKNIAPN-VDAFLVLTSTHSSNGMRLLELAEAECGR-AYRLETAADLTrl------------- 266 Deinococcus radiodura...
Q8YFR1 202 ----ESICYATTNRQDAVRAAAPG-CDLFLIVGAPNSSNSKRLVEVAEKAGARmSMLVQRAEDIE--------------- 261 Brucella melitensis b...
Q55643 333 vlEPWLPAGKIt-VGVTSGASTPDKVVEEVMKKILAI 368 Synechocystis sp. PCC 6803 substr. Kazusa
P58675 248 --ESLLEDESVktIGITAGASTPDWIINEVISKIKEL 282 Clostridium perfringens str. 13
O67625 249 --PEWFRGVKR--VGISAGASTPDWIIEQVKSRIQEI 281 Aquifex aeolicus VF5
P94644 242 --KEWFLDKKH--CGISAGASTPDWIIQKVIAKIENF 274 Campylobacter jejuni
Q9X1F7 236 --ADVVKYGTV---CVFSGTSTPNSLIENVVRKLKEM 267 Thermotoga maritima MSB8
O83558 292 --PDIYAFSAV---GISAGASTPDCVIAAVEQALRTG 323 Treponema pallidum subsp. pallidum str. Nichols
P54473 255 --LEWLKGVNT--VAVTAGASTPTPITKEVIRFLEQF 287 Bacillus subtilis subsp. subtilis str. 168
O84867 251 --EEILQYSGN--IGITAGASTPEDVVQACLMKLQEL 283 Chlamydia trachomatis D/UW-3/CX
Q9RSG0 267 eqNGDLGGVRS--VGITSAASTPDDLVQDVVAHFRAL 301 Deinococcus radiodurans R1
Q8YFR1 262 --WEQIGDISV--VGLSAGASAPEIIVDEIIDAFKAR 294 Brucella melitensis bv. 1 str. 16M
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