Conserved Protein Domain Family
glyS

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TIGR00211: glyS 
glycyl-tRNA synthetase, tetrameric type, beta subunit
The glycyl-tRNA synthetases differ even among the eubacteria in oligomeric structure. In Escherichia coli and most others, it is a heterodimer of two alpha chains and two beta chains, encoded by tandem genes. The genes are similar, but fused, in Chlamydia trachomatis. By contrast, the glycyl-tRNA synthetases of Thermus thermophilus and of archaea and eukaryotes differ considerably; they are homodimeric, mutually similar, and not detected by this model. [Protein synthesis, tRNA aminoacylation]
Statistics
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PSSM-Id: 272962
Aligned: 5 rows
Threshold Bit Score: 1022.04
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q55690         1 MPLQTFLFEIGTEELPADFVRSAITQWQGLIPPGLAAEFLQPESVEIYGTPRRLAVLIKGLPECQPDRLEEIKGPPASAA 80  Synechocystis s...
P43822         1 MTTQNFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQQPSKEIEKRGPAVSAA 80  Haemophilus inf...
P54381         1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKDVAEKQDDIKEEAKGPAKKIA 80  Bacillus subtil...
P56454         1 MHSDELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLIKDFPLLTQETKEEFFGPPVKIA 80  Helicobacter py...
WP_001291772   1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQA 80  Enterobacteriaceae
Q55690        81 FK--DGQPTPAALGFAKKQGVNPEDFEIRSTPKG---DFIFVNKQLQGQASRDLLPKLALSWLKALDGRRFMRWGDGDWR 155 Synechocystis s...
P43822        81 FDa-EGKPTKAAEGWARGCGITVEQAERIATDKG---EWLIHRAKIEGQPTKNLLNDIVANALAKLPIPKPMRWADKTVQ 156 Haemophilus inf...
P54381        81 LDa-DGNWTKAAIGFSKGQGANVEDLYIKEVKGI---EYVFVQKFQAGQETKSLLPELSG-LITSLHFPKNMRWGNEDLR 155 Bacillus subtil...
P56454        81 CNhqDKTQGLNALGLGFYQKLGLKDHQYFQTAFKnnkEVLYHAKIHEKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEKS 160 Helicobacter py...
WP_001291772  81 FDa-EGKPSKAAEGWARGCGITVDQAERLTTDKG---EWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVH 156 Enterobacteriaceae
Q55690       156 FPRPIRWLVCLL-DDQVLPLQIDNgsttLVGDRLSRGHRILHPADVSLEHGQNYLAQLKTA-GVVVDPQERRAMIEQQIT 233 Synechocystis s...
P43822       157 FIRPVHTVTMLL-GDELIEGEILG----VASARTIRGHRFLGEKEFYIQHADQYPQLLREKgSVVADFNERKAEILAKSQ 231 Haemophilus inf...
P54381       156 YIRPIKWIVALF-GQDVIPFSITN----VESGRTTQGHRFLG-HEVSIESPSAYEEQLKGQ-HVIADPSVRKQMIQSQLE 228 Bacillus subtil...
P56454       161 FIRPIHNICVLFnGEDFSGIEVKEy--gFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKN-HVILDPKKREAKILQEIK 237 Helicobacter py...
WP_001291772 157 FVRPVHTVTLLL-GDKVIPATILG----IQSDRVIRGHRFMGEPEFTIDNADQYPEILRERgKVIADYEERKAKIKADAE 231 Enterobacteriaceae
Q55690       234 TQAATLEGEAIIYEDLLDEVEQLVEYPTAVLGKFDQEFLSLPREVTTTVMVTHQRYFPVVDKDGR-----LLPHFITIAN 308 Synechocystis s...
P43822       232 AKATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYDKDGK-----LLPHFIFVSN 306 Haemophilus inf...
P54381       229 TMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFPVKDKNGD-----LLPHFITVRN 303 Bacillus subtil...
P56454       238 ELETKHHIIVETDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFATFCQKSQeesptLHNGFIVVSN 317 Helicobacter py...
WP_001291772 232 EAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGK-----LLPNFIFVAN 306 Enterobacteriaceae
Q55690       309 GDPSKGDIIAAGNGRVIRARLADAKFFYQADCDDSLDSYLPQLETVTFQEELGTMRDKVDRIMEMAAAIADQLGVTEQqr 388 Synechocystis s...
P43822       307 INPEDPTAIIEGNEKVVRPRLTDAEFFFKTDLKQKLVDRLPRLETVLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEA-- 384 Haemophilus inf...
P54381       304 GNSHAIENVARGNEKVLRARLSDASFFYKEDQKLNIDANVKKLENIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDtl 383 Bacillus subtil...
P56454       318 AINKDKQKIILGNQKVLKARLSDAVFFYENDLKKPLDN--APLESVVFVQGLGTLKDKMERESIIAQYLTQKYISSLNmp 395 Helicobacter py...
WP_001291772 307 IESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVN-- 384 Enterobacteriaceae
Q55690       389 -----gEIDSTAMLCKADLVTQMVYEFPELQGIMGEKYALVSGESAAVAQGIVEHYLPRHQDDDLPQGLPGQVVGMADRL 463 Synechocystis s...
P43822       385 ------KAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVASAVALADKF 458 Haemophilus inf...
P54381       384 -----kHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGETPSTFTGAVVAMADKL 458 Bacillus subtil...
P56454       396 lekaleLVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPLPSSVFSSIVALSLKL 475 Helicobacter py...
WP_001291772 385 ------HATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKM 458 Enterobacteriaceae
Q55690       464 DTLVSIFGLGLLPTGSSDPFALRRAANAVINVAWAASLEINLLELLTQgcrdFVTSHPDKTSP---LQALKTFFLQRLQT 540 Synechocystis s...
P43822       459 DTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKK----SAALFGDKLTNqnvVADVVDFMLGRFRA 534 Haemophilus inf...
P54381       459 DTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEELLT-------FVQTDKEN------ELLDFFTQRLKY 525 Bacillus subtil...
P56454       476 DSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLKN------LFQKVGVYQsfdLEILEKFLLERFHN 549 Helicobacter py...
WP_001291772 459 DTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEE----AVRLYGDKLTNanvVDDVIDFMLGRFRA 534 Enterobacteriaceae
Q55690       541 LLQDEqGIDYDLVNAVLGNGETncdeaqsrlhdrllaDLQDVKERAQYLQELRDNG----HLDAIYPTVNRSAKLASKGT 616 Synechocystis s...
P43822       535 WYQDE-GIAVDVIQAVLARRPT---------------RPADFDARVRAVSHFRTLD----SAEALAAANKRVSNILAKAG 594 Haemophilus inf...
P54381       526 VLNAE-QIRHDVIDAVLESSEL---------------EPYSALHKAQVLEQKLGAP----GFKETAEALGRVISISKKG- 584 Bacillus subtil...
P56454       550 LIDCN----PSIIRSVLNTNER---------------DIVKIIQKVKALKRFLDDPknaqKKELLFSAFKRLANINKDRN 610 Helicobacter py...
WP_001291772 535 WYQDE-GYTVDTIQAVLARRPT---------------RPADFDARMKAVSHFRTLD----AAAALAAANKRVSNILAKSD 594 Enterobacteriaceae
Q55690       617 LptdQLDprpVIQAPQLVQDSEKAVYQALLAIYPKAVEVQESRDYETLVNALHELAPTVAEFFDgpdSVLVMAENDELRQ 696 Synechocystis s...
P43822       595 A---AIG---EINLTACVEPAEKALAEAVLALRTEVQPLIAQGDYTTVLDKLANLRAPVDSFFD---NVMVNAEDPALRQ 665 Haemophilus inf...
P54381       585 ----VRG---DIQPDLFENEYEAKLFDAYQTAKQNLQENFSKKDYEAALASLAALKEPIDAYFD---HTMVIADNESLKA 654 Bacillus subtil...
P56454       611 P---NESs--EFSTNLFKEPKEHALFEAFNAIKMNAFES-----LDSKIEAYFGLHAPLEEYFK---SVLVMDKDIEIQK 677 Helicobacter py...
WP_001291772 595 E---VLSd--RVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFD---KVMVMVDDKELRI 666 Enterobacteriaceae
Q55690       697 NRLNLLGLIRNYALILGDFGAIV 719 Synechocystis sp. PCC 6803 substr. Kazusa
P43822       666 NRLAILNTLQGLFLQVADISVLQ 688 Haemophilus influenzae Rd KW20
P54381       655 NRLAQMVSLADEIKSFANMNALI 677 Bacillus subtilis subsp. subtilis str. 168
P56454       678 NRKNFLWGVYQSFLEIGDIKEIA 700 Helicobacter pylori 26695
WP_001291772 667 NRLTMLEKLRELFLRVADISLLQ 689 Enterobacteriaceae
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