Conserved Protein Domain Family
comF
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TIGR00201: comF 
comF family protein
This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis. [Cellular processes, DNA transformation]
Links
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Statistics
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PSSM-Id: 272958
Aligned: 4 rows
Threshold Bit Score: 252.825
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P31773        24 CSGCQKQiKS-FPYCGHCGSELQYYAQHcgNCLKQEpswdkmVIIGHYIEPLSILIQRFKFQNQFWIDRTLARLLYLAVR 102 Haemophilus inf...
P39147        44 CPLCGRP-QSvHAVCRDCEVWRTRIRDS--LLLRQN------RSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFS 114 Bacillus subtil...
WP_002663868   4 CVFCGKRyVSsNALCDQCKS---LFNFN--IKFDENl-----IYFFEYKEHYKSLILSYKRDAQKSIGRFLASGIAECLN 73  Lyme disease sp...
WP_001326749  11 CSVCSRAtRTdKTLCPQCGLPATHSHLPcgRCLQKPppwqrlVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVL 90  Escherichia coli

P31773       103 DAKRthqlKLPEAIIPVPLYHFRQWRRGYNQADLLSQQLSRWLdipnlNNIVKRVKHtYTQRGLSAKDRrQNLKNAFSLA 182 Haemophilus inf...
P39147       115 KVYP----DKHFVLVPIPLSKEREEERGFNQAHLLAECLDRPS-----HHPLIRLNN-EKQSKKKKTER-LLSECIFDTK 183 Bacillus subtil...
WP_002663868  74 NIDF-------DQIVTVPCSFKRKLFYGFDHMEYIGILLSRFGfn--yINIFSRKYG-KSQKLMKGNLRfKNLENKIKLR 143 Lyme disease sp...
WP_001326749  91 HARRttglQLPDRIVSVPLWQRRHWRRGFNQSDLLCQPLSRWLhcqwdSEAVTRTRAtATQHFLSARLRkRNLKNAFRLE 170 Escherichia coli

P31773       183 V--SknEFPYRRVALVDDVITTGSTLNEISKLLRK-LGVEEIQVWGLAR 228 Haemophilus influenzae Rd KW20
P39147       184 N--N--SAEGMNIILIDDLYTTGATLHFAARCLLEkGKAASVSSFTLIR 228 Bacillus subtilis subsp. subtilis str. 168
WP_002663868 144 SkyKn--FQFKKIVLLDDIVTTGASMCICEDLIMQ-LGAYKVIKLSLAK 189 Lyme disease spirochete
WP_001326749 171 L--P---VQGRHMVIVDDVVTTGSTVAEIAQLLLR-NGAAAVQVWCLCR 213 Escherichia coli
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