Conserved Protein Domain Family
uvrC

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TIGR00194: uvrC 
excinuclease ABC, C subunit
This family consists of the DNA repair enzyme UvrC, an ABC excinuclease subunit which interacts with the UvrA/UvrB complex to excise UV-damaged nucleotide segments. [DNA metabolism, DNA replication, recombination, and repair]
Statistics
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PSSM-Id: 272953
Aligned: 9 rows
Threshold Bit Score: 713.759
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P44489         4 AKKFLTDVSHEPGVYRMYDDKDQVIYVGKAKDLKKRLSSYFRKNLs--------SKKTEALVASIHHIDTTLTSSETEAL 75  Haemophilus inf...
P73580        17 LERRLQEIPQEPGVYFMGDRQGEILYIGKAKKLRTRVRSYFRDSQp-------hTARIALMVQQVAEIEFIVTDTEAEAL 89  Synechocystis s...
O26541         3 RVKDPEKLPDATGVYIFRDRDDRVLYVGKSISIRKRVSSYFREQE---------NPRLRIMMRHLESIEYILTQNEKEAL 73  Methanothermoba...
P14951         5 LKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSH---------DAKTQRLVTEIEDFEYIVTSSNLEAL 75  Bacillus subtil...
O51413         8 LFEKVIKLPTTSGCYKMLNENKKILYIGKAKNLRSRVKSYFLEKN---------SHKIKILMKNVKSIEVITTNSEYEAL 78  Borrelia burgdo...
P56428         4 LLSSLKNLPNSSGVYQYFDKNRQLLYIGKAKNLKKRIKSYFSIRNneitpnhraSLRIQMMVKQIAFLETILVENEQDAL 83  Helicobacter py...
P75350         8 LAFKLKNAPHKPGCYLWKDDAGQVLYVGKAKDIFKRVHHYFNPNR---------SFKTRALVERIADVEYVILKNENDAL 78  Mycoplasma pneu...
P47448         5 LKQKLKTAPKKPGCYLWKDSNGKVLYVGKASNIFNRVHQYFQKNN---------PYKTQLLSSQISDVDFFILKDENDAL 75  Mycoplasma geni...
WP_001283422   7 akaflktvtsqpgvyrMYDAGGTVIYVGKAKDLKKRLSSYFRSNLa--------SRKTEALVAQIQQIDVTVTHTETEAL 78  Shigella dysent...
P44489        76 LLEHNFIKLYQPRYNVLLRDDKSYPFILLTK-ERHQRITSYR--GSKKFAGEYFGPYP-HAGAVRETLSLLQKLFPVRQC 151 Haemophilus inf...
P73580        90 ALEANLIKQHQPHFNVLLKDDKKYPYVCITWsETYPRIFITRkrRLNQAKDRYYGPYV-DSFSLRQTLRLIQRIFPLRQR 168 Synechocystis s...
O26541        74 ILESNLIKRYRPPYNVRLKDDKRYPFIKITD-EEYPRVLIVR--TIGRDSARYYGPFT-DTGAVRRTLKLIKSLFRIRSC 149 Methanothermoba...
P14951        76 ILEMNLIKKHDPKYNVMLKDDKTYPFIKLTH-ERHPRLIVTR--NVKKDKGRYFGPYP-NVQAARETKKLLDRLYPLRKC 151 Bacillus subtil...
O51413        79 LLECNLIKTHKPDYNVKLKDGKGYPMVRITH-EKYPRIFKTR--KIINDKSEYFGPFT-NVKKLDQVLDFINKTFKIRKC 154 Borrelia burgdo...
P56428        84 ILENSLIKQLKPKYNILLRDDKTYPYIYMDFsTDFPIPLITRk-ILKQPGVKYFGPFTsGAKDILDSLYELLPLVQKKNC 162 Helicobacter py...
P75350        79 NLEAKLIKQYKPRFNLVLKENNGYLYFFITA-SVKPTLELGR--RYEFSKNKYFGPFAsSKFRLRDIYDLLLKLFPLRKC 155 Mycoplasma pneu...
P47448        76 NLEAKLINQYQPRFNLVLKQNNGYLYFYITK-AKKPTLELAR--KYQIKTTKCFGPFAsSKFKLREIHDLLLKLFPLRKC 152 Mycoplasma geni...
WP_001283422  79 LLEHNYIKLYQPRYNVLLRDDKSYPFIFLSG-DTHPRLAMHR--GAKHAKGEYFGPFP-NGYAVRETLALLQKIFPIRQC 154 Shigella dysent...
P44489       152 ENsvySNRSRPCLQYQIGRCSAPCVQGYVsDEEYNQQVELARLFLQGKDQQVLDYLIGKMEQASRNLDFEQAARYRDQIQ 231 Haemophilus inf...
P73580       169 RQp--LFKHRPCLNYDIGRCPGVCQELIT-PEDYRQTLQKVAMVFQGRTQELHQLLTQQMEKAAADLKFEQAALIRDQIN 245 Synechocystis s...
O26541       150 RR-----MDGPCLNSQIDLCYAPCDGRIS-REDYREIIEKVDLFFQGRYQEVIEVLEEEMKEASERLEFERAARIRDQIE 223 Methanothermoba...
P14951       152 SK----LPDRVCLYYHLGQCLAPCVKDIS-EETNRELVESITRFLRGGYNEVKKELEEKMHEAAENLEFERAKELRDQIA 226 Bacillus subtil...
O51413       155 KK----KSNAPCLYYHMGQCLGVCYKENL-EKEYQKELDKAKSILNGNISEISSQIDIKLKHAIQKEDFETAIKLKEIRN 229 Borrelia burgdo...
P56428       163 IK-----DKKACIFYQIERCKAPCENKIT-KEEYLKIAKECLEMIEN-KDRLIKELELKMERLSNNLRFEEALIYRDRIA 235 Helicobacter py...
P75350       156 AP---HERGHPCFYYQLKMCMGQCMGEDT-PERYQTTVKGIEQFFNHGPEQVLNHLQQQEIKASEQQNFEAARHFLDLQK 231 Mycoplasma pneu...
P47448       153 AP---HQKNHPCFYFQMGLCMGQCMQTDT-KEKYQQVISNIEQFFND-PSVVINYLKAAEKKASDNQEFEKAQQFLTLQK 227 Mycoplasma geni...
WP_001283422 155 ENsvyRNRSRPCLQYQIGRCLGPCVEGLVsEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQ 234 Shigella dysent...
P44489       232 AVRSVIEKQFVSNE-RLDDMDIMSIAYQHGLACVQVMFIRQGKVLGNR-SYFPKVPAnTDLSELTETFVGQFYLQgHQGR 309 Haemophilus inf...
P73580       246 SLGKLNADQKVSLPqDTISRDAIAVASDGQISAIQLFQIRAGRLVGRLgFFADGVESeLEKGEVLQRVLEQHYQQ-VEAV 324 Synechocystis s...
O26541       224 SIREVMERQHASFT-DSIDQDIVALERGGDTSAVVVLQIRDGKITGKD---DFILRGsAPRTEILEAFLKQYYAIp---R 296 Methanothermoba...
P14951       227 HIESTMEKQKMTMN-DLVDRDVFAYAYDKGWMCVQVFFIRQGKLIERD-VSMFPLYQ--EADEEFLTFIGQFYSK--NNH 300 Bacillus subtil...
O51413       230 SLIEINQIQIVTKT-NNLNIDYVHVHPGENVNTIIVLKYRNGKLVERDaNFDESICK--E-NELILQFLIQYYTS--INM 303 Borrelia burgdo...
P56428       236 KIQKIAPFTCMDLA-KLYDLDIFAFYGASNKAVLVKMFMRGGKIISSAfEKIHSLNG-FDTDEAMKQAIINHYQS--HLP 311 Helicobacter py...
P75350       232 AVLELVNMQQTAFIkAKQSHDFIGYVFEKNVLAITVFAYVDNQLIGKN-QQVFELPQ-DDEKE-VESALVTFIYHyYSTN 308 Mycoplasma pneu...
P47448       228 AVLELTKTHHTTIIkQKSSHDFIGYVFQNNVLAITIFCYEKGELTDKE-QAVFTLEQ-TDIVE-VESAIITFIYHhYKTT 304 Mycoplasma geni...
WP_001283422 235 AVRRVTEKQFVSN--TGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSR-SYFPKVPGgTELSEVVETFVGQFYLQgSQMR 311 Shigella dysent...
P44489       310 SIPNSIIVDRQL-AEKSELEQLLSEQAGRKVTIQESVKGDKSKYLQLAQVNAKAALNVQLKQSSRm----SERYQALCDL 384 Haemophilus inf...
P73580       325 EIPSEVILPCAL-PDGELLNDWLTSQRGRKVTFNLPQRQTKAELLEMVERNAQYELERLQKQTAKn----VTALEDLAEI 399 Synechocystis s...
O26541       297 RVPSEILTQYPV-EDG-VIAEWLSELRGEEVKIHSPEGGAGRRLLNIAWKNASVILKQKGR--VR------DALLQLKDD 366 Methanothermoba...
P14951       301 FLPKEILVPDS--IDQSMIEQLL------ETNVHQPKKGPKKELLMLAHKNAKIALKEKFSLIERdeersIGAVQKLGEA 372 Bacillus subtil...
O51413       304 IVPDKIHIFLKD-IDTKNVEKLINEIKNTKTEIIYKETEEILKIMEMAISNAELSLREYEN--KS-----TKALESLKIV 375 Borrelia burgdo...
P56428       312 LMPEQILLNACSnETLKELQEFISHQYSKKIALSIPKKGDKLALIEIAMKNAQEIFSQEKTSNED------LILEEARSL 385 Helicobacter py...
P75350       309 KIPKTLTVSLSE-ENLSLLANSL------KINVTQPKNGEQKSILQTVIDNARYALNTKWTGFINnl-nrAEVHQQLAQL 380 Mycoplasma pneu...
P47448       305 PLPSKITVSLDE-TNLKLISDSL------KIGVFKPKNGNEKLILQTVIDNAKHALATKWLKFTSny-dkTQLHKDLAQL 376 Mycoplasma geni...
WP_001283422 312 TLPGEILLDFNL-SDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTv----HQRLTALASV 386 Shigella dysent...
P44489       385 LNLPKI-KRMECFDISHTMGNQTVASCVVFNKEGPLKSDYRRFNIE--GITGG--DDYAAMEQVLQKRYERDLE--EDKI 457 Haemophilus inf...
P73580       400 LNLETLpKRIEGYDISHIQGSNAVASQVVFIDGVPAQQYYRHYKIKnpSIKVGhsDDFASLAEVIIRRFQSSVKgkKNQQ 479 Synechocystis s...
O26541       367 LKLPEIpRRMEGLDISNIAGESATGSVAVFIDGKPSSGSYRRYRIS---AQGP--DDYAMMRELVERRYSSPEL--RK-- 437 Methanothermoba...
P14951       373 LNIYTP-HRIEAFDNSNIQGTNPVSAMIVFIDGKPYKKEYRKYKIK--TVTGP--DDYGSMREVVRRRYTRVLR--EN-L 444 Bacillus subtil...
O51413       376 LEMDKLpKIIEGFDIAHLKGQETVASMVTFKMGMPFKENYRLYKLN--SLLKGeiDDFKAIKEVISRRYSEIIN---NNL 450 Borrelia burgdo...
P56428       386 FKLECMpYRVEIFDTSHHSSSQCVGGMVVYENNAFQKNSYRRYHLK-----GS--DEYTQMSELLTRRALDFAK-----E 453 Helicobacter py...
P75350       381 LQVPSI-QSLEIIDISFYDKDHVVGAMLRYENGKRMKALSRRYNIN--IDHKG--DTNYMADVVYRRIISSIQT--HKQL 453 Mycoplasma pneu...
P47448       377 LNTDYI-HSLEIIDVSFYDQNHVVGCMLRFEDGKKIKHLSRRYNIN--SLKKG--DTNHIALLVYRRILSAMQT--KANL 449 Mycoplasma geni...
WP_001283422 387 LKLPEV-KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNIT--GITPG--DDYAAMNQVLRRRYGKAID--DSKI 459 Shigella dysent...
P44489       458 P--DIIFIDGGKGQLNRALNVFQHLQVkwdKNRPHLIGVAKg---vDRRAgqEVLIISKQDREIHLpdDSLALHLIQHIR 532 Haemophilus inf...
P73580       480 DwpDLIMIDGGKGQLSAVVKVLKKMDL---LDKFTVVSLAK-----QREE--IFLPGESQPLPTHA--EQPGVQLLRRLR 547 Synechocystis s...
O26541       438 P--DLVLIDGGKGQLGVALEALKNCGV-----HVPVVGIAK-----KREE--VYLPGLSEPVDVDD----GALQILRHLR 499 Methanothermoba...
P14951       445 PlpDLIIIDGGKGQINAARDVIENELG----LDIPIAGLAKd----EKHRtsNLLIGDPLEVAYLEr-NSQEFYLLQRIQ 515 Bacillus subtil...
O51413       451 ElpNLILIDGGKGQLNAALSILKGLKI---ENKVKVCSLAK------KQEt-IFLTTNKKGINLPQ--GHPALRILQNVR 518 Borrelia burgdo...
P56428       454 PppNLWVIDGGRAQLNIALEILKSSGS---FVEVIAISKEKrdskaYRSKggAKDIIHTPSDTFKLlpSDKRLQWVQKLR 530 Helicobacter py...
P75350       454 PlsDLLIVDGGIAQINTVTKVFASFPN---VTQPIIIGLAKn----TRHQtdHIVLTDNTTINIDK--NTPLFAYLTTIQ 524 Mycoplasma pneu...
P47448       450 PfsDLLIIDGGKAQIKSVKQVFSLFSN---VKPPIIIGLVKn----KNHQtdHIMLSDFQVKKIAI--NSPLFHYLATIQ 520 Mycoplasma geni...
WP_001283422 460 P--DVILIDGGKGQLAQAKNVFAELDVswdKNHPLLLGVAKg---aDRKAglETLFFEPEGEGFSLppDSPALHVIQHIR 534 Shigella dysent...
P44489       533 DESHNHAISGHRKKRQKAFTQSGLETIEGVGAKRRQALLKYLGGLQGVKKATLDE 587 Haemophilus influenzae Rd KW20
P73580       548 DEAHRFAVSFHRQQRLSKSRRSRLDEIPGLGFSRQKQLLAHFRSLDYIREASVKQ 602 Synechocystis sp. PCC 6803 substr. Kazusa
O26541       500 DEAHRFAVKYHRTIRDRDSLESELDGIRGVGPVRKRALLEHFGSLDGVRDASVEE 554 Methanothermobacter thermautotrophicus s...
P14951       516 DEVHRFAISFHRQIRGKSAFQSVLDDIPGIGEKRKKMLLKHFGSVKKMKEASLED 570 Bacillus subtilis subsp. subtilis str. 168
O51413       519 DEAHRKANGFNKKRREK--ITLLYTKIHGIGEKTAQKILKSIGTYKDILPLSENE 571 Borrelia burgdorferi B31
P56428       531 DESHRYAINFHRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASEQE 585 Helicobacter pylori 26695
P75350       525 EEVDSFAKHNAFKRVSRARFQNPLLQIEGVGRKTVQILLDNFQTN-------AKH 572 Mycoplasma pneumoniae M129
P47448       521 TEVDGFAKRSAFNKLSNHQLQNPLLQIPGVGKITAQILFDNFQTLNNIKLASVNE 575 Mycoplasma genitalium G37
WP_001283422 535 DESHDHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEE 589 Shigella dysenteriae
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