1P8F,2IV0


Conserved Protein Domain Family
prok_nadp_idh

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TIGR00183: prok_nadp_idh 
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isocitrate dehydrogenase, NADP-dependent, prokaryotic type
Several NAD- or NADP-dependent dehydrogenases, including 3-isopropylmalate dehydrogenase, tartrate dehydrogenase, and the multimeric forms of isocitrate dehydrogenase, share a nucleotide binding domain unrelated to that of lactate dehydrogenase and its homologs. These enzymes dehydrogenate their substates at a H-C-OH site adjacent to a H-C-COOH site; Prokaryotic NADP-dependent isocitrate dehydrogenases resemble their NAD-dependent counterparts and 3-isopropylmalate dehydrogenase (an NAD-dependent enzyme) more closely than they resemble eukaryotic NADP-dependent isocitrate dehydrogenases. [Energy metabolism, TCA cycle]
Statistics
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PSSM-Id: 272948
Aligned: 7 rows
Threshold Bit Score: 748.966
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1P8F_A         8 PAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYkgeRKISWMEIYTGEKSTQVYGq------- 80  Escherichia col...
P39126         1 MAQGEKITVSNGVLNVPNNPIIPFIEGDGTGPDIWNAASKVLEAAVEKAYkgeKKITWKEVYAGEKAYNKTG-------- 72  Bacillus subtil...
P08200         8 PAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYkgeRKISWMEIYTGEKSTQVYGq------- 80  Escherichia col...
P56063        11 PKEGEEITIKDNKLHVPNHPIIPFIEGDGIGSDITPAMIKVVDSAVQKAYkgeKKIAWYEVFVGEKCYQKFKdykelspe 90  Helicobacter py...
WP_010871465   8 PSVGSKITFVAGKPVVPNDPIIPYIRGDGTGVDIWPATELVINAAIAKAYggeRKINWFKVYAGDEACELYGt------- 80  Synechocystis s...
O29610         9 PENGEKIRYENGKLIVPDNPIIPYFEGDGIGKDVVPAAIRVLDAAADKIG---KEVVWFQVYAGEDAYKLYG-------- 77  Archaeoglobus f...
2IV0_A         9 PENGEKIRYENGKLIVPDNPIIPYFEGDGIGKDVVPAAIRVLDAAADKIG---KEVVWFQVYAGEDAYKLYG-------- 77  Archaeoglobus f...
1P8F_A        81 dVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY 160 Escherichia col...
P39126        73 -EWLPAETLDVIREYFIAIKGPLTTPVGGGIRSLNVALRQELDLFVCLRPVRYFTGVPSPVKRPEDTDMVIFRENTEDIY 151 Bacillus subtil...
P08200        81 dVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY 160 Escherichia col...
P56063        91 eQWLLPDTIEAINHYKVSIKGPLTTPIGEGFRSLNVALRQKMDLYVCLRPVRWYG-SPSPVKEPQKVDMVIFRENSEDIY 169 Helicobacter py...
WP_010871465  81 yQYLPEDTLTAIKEYGVAIKGPLTTPVGGGIRSLNVALRQIFDLYTCVRPCRYYPGTPSPHKTPEKLDIIVYRENTEDIY 160 Synechocystis s...
O29610        78 -NYLPDDTLNAIKEFRVALKGPLTTPVGGGYRSLNVTIRQVLDLYANVRPVYYLKGVPSPIKHPEKVNFVIFRENTEDVY 156 Archaeoglobus f...
2IV0_A        78 -NYLPDDTLNAIKEFRVALKGPLTTPVGGGYRSLNVTIRQVLDLYANVRPVYYLKGVPSPIKHPEKVNFVIFRENTEDVY 156 Archaeoglobus f...
1P8F_A       161 AGIEWKADSADAEKVIKFLREEMGvkkIRFPE-----HCGIGIKPCSEEGTKRLVRAAIEYAIAN--DRDSVTLVHKGNI 233 Escherichia col...
P39126       152 AGIEYAKGSEEVQKLISFLQNELNvnkIRFPE-----TSGIGIKPVSEEGTSRLVRAAIDYAIEH--GRKSVTLVHKGNI 224 Bacillus subtil...
P08200       161 AGIEWKADSADAEKVIKFLREEMGvkkIRFPE-----HCGIGIKPCSEEGTKRLVRAAIEYAIAN--DRDSVTLVHKGNI 233 Escherichia col...
P56063       170 AGIEWQEGSAEAKKLIHFLQNELKvkkIRFPE-----SSGIGVKPISKEGTERLVRKAIEYAIDN--DKPSVTFVHKGNI 242 Helicobacter py...
WP_010871465 161 LGIEWAEGTEGAKKLIAYLNDELIpttPALGKkqirlDSGIGIKPISKTGSQRLVRRAILHALRLpkAKQMVTLVHKGNI 240 Synechocystis s...
O29610       157 AGIEWPRGSEEALKLIRFLKNEFG---VTIRE-----DSGIGIKPISEFATKRLVRMAIRYAIEN--NRKSVTLVHKGNI 226 Archaeoglobus f...
2IV0_A       157 AGIEWPRGSEEALKLIRFLKNEFGv---tIRE-----DSGIGIKPISEFATKRLVRMAIRYAIEN--NRKSVTLVHKGNI 226 Archaeoglobus f...
1P8F_A       234 MKFTEGAFKDWGYQLAREEFGGELID----GGPWLKVKNp-----------NTGKe------------------------ 274 Escherichia col...
P39126       225 MKFTEGAFKNWGYELAEKEYGDKVFT----WAQYDRIAE------------EQGKdaankaqs----------------- 271 Bacillus subtil...
P08200       234 MKFTEGAFKDWGYQLAREEFGGELID----GGPWLKVKNp-----------NTGKe------------------------ 274 Escherichia col...
P56063       243 MKYTEGAFMKWGYALAQKEFNAQVID----KGPWCSLKNp-----------KNGKe------------------------ 283 Helicobacter py...
WP_010871465 241 MKFTEGAFRDWGYELATTEFRAECVTeresWILGNKESNpdltieanahmiDPGYdtlteekqavikqeveqvlnsiwes 320 Synechocystis s...
O29610       227 MKYTEGAFRDWGYEVAKQEFGEYCITe---DELWDKYGGk----------qPEGK------------------------- 268 Archaeoglobus f...
2IV0_A       227 MKYTEGAFRDWGYEVAKQEFGEYCITe---DELWDKYGGk-----------QPEGk------------------------ 268 Archaeoglobus f...
1P8F_A       275 ---------IVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECA--LFEATHGTAP 343 Escherichia col...
P39126       272 --eaeaagkIIIKDSIADIFLQQILTRPNEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGhaIFEATHGTAP 349 Bacillus subtil...
P08200       275 ---------IVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECA--LFEATHGTAP 343 Escherichia col...
P56063       284 ---------IIIKDMIADAFLQQILLRPSEYSVIATMNLNGDYISDALAAMVGGIGIAPGANLNDTVG--MFEATHGTAP 352 Helicobacter py...
WP_010871465 321 hgngqwkekVMVNDRIADSIFQQIQTRPDEYSILATMNLNGDYLSDAAAAVVGGLGMGPGANIGDSAA--IFEATHGTAP 398 Synechocystis s...
O29610       269 ---------IVVKDRIADNMFQQILTRTDEYDVIALPNLNGDYLSDAAAALIGGLGIAPGSNIGDGIG--VFEPVHGSAP 337 Archaeoglobus f...
2IV0_A       269 ---------IVVKDRIADNMFQQILTRTDEYDVIALPNLNGDYLSDAAAALIGGLGIAPGSNIGDGIG--VFEPVHGSAP 337 Archaeoglobus f...
1P8F_A       344 KYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMDGa--KLLKCSEFGDAIIENM 416 Escherichia coli K-12
P39126       350 KYAGLDKVNPSSVILSGVLLLEHLGWNEAADLVIKSMEKTIASKVVTYDFARLMDGa--TEVKCSEFGEELIKNM 422 Bacillus subtilis su...
P08200       344 KYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMDGa--KLLKCSEFGDAIIENM 416 Escherichia coli K-12
P56063       353 KYAGLDKVNPGSIILSAEMMLRHMGWVEAADLIVSAMEKAIKSKKVTYDFARLMDGa--KEVKCSEFASVMIENM 425 Helicobacter pylori ...
WP_010871465 399 KHAGLDRINPGSVILSGVMMLEFMGWQEAADLIKKGIGAAIANREVTYDLARLMEPkvdKPLKCSEFAQAIVSHF 473 Synechocystis sp. PC...
O29610       338 KYAGQNKVNPTAEILTGALMFEYIGWKDASEMIKKAVEMTISSGIVTYDIHRHMGG---TKVGTREFAEAVVENL 409 Archaeoglobus fulgid...
2IV0_A       338 KYAGQNKVNPTAEILTGALMFEYIGWKDASEMIKKAVEMTISSGIVTYDIHRHMGG---TKVGTREFAEAVVENL 409 Archaeoglobus fulgid...
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