1P6G


Conserved Protein Domain Family
S6

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TIGR00166: S6 
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ribosomal protein S6
The ribosomal protein S6 ortholog family, including yeast MRP17, shows more than two-fold length variation from 95 residues in Bacillus subtilis to 215 in Mycoplasma pneumoniae. This length variation comes primarily from poorly conserved C-terminal extensions that are particularly long in the Mycoplasmas. MRP17 protein is a component of the small ribosomal subunit in mitochondria, and is shown here to be an ortholog of S6. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Statistics
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PSSM-Id: 129270
View PSSM: TIGR00166
Aligned: 10 rows
Threshold Bit Score: 104.754
Threshold Setting Gi: 133127
Created: 7-Oct-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1P6G_F   2 RHYEIVFMVHPDQSEQ----VPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPIN----KLHKAHYVLMNVEAPQEVIDE 73  Escherichia coli K-12
Q8XDI1   2 RHYEIVFMVHPDQSEQ----VPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPIN----KLHKAHYVLMNVEAPQEVIDE 73  Escherichia coli O6
P44375   2 RHYEIVFMVHPDQSEQ----VPGMIERYTGSVKEAGGQVHRLEDWGRRQLAYPIN----KLHKAHYVLMNVEAPQQVIDE 73  Haemophilus influenza...
P21468   2 RKYEVMYIIRPNIDEEs---KKAVIERFNNVLTSNGAEITGTKDWGKRRLAYEIN----DFRDGFYQIVNVQSDAAAVQE 74  Bacillus subtilis sub...
P56013   2 RHYETMFILKPTLVEEe---IKSKIEFYKEVITKHHGVIETSLDMGMRNLAYEIK----KHKRGYYYVAYFKAEPSMIVE 74  Helicobacter pylori 2...
P73636   4 NSYELMVILRPDLNEEr---VSQEVTKYQEFLTNNAAEEVSVKVWGKRRLAYQIR----RFNDGIYVLFNFNGEGQQIAL 76  Synechocystis sp. PCC...
P75543   1 MQYNIILLVDGSLSLE----QANQVNEKQ-QQTLTNVEGLQTEYLGLKELAYPIK----KQLSAHYYRWKFSGDNQSTKD 71  Mycoplasma pneumoniae...
P47336   1 MHYNIILLVDGTLSLE----QANQVEQKH-QKLLEKATEFKSEYLGLKELAYPIK----KQLSAHYYRWSFHGESNCTKE 71  Mycoplasma genitalium...
O51142   3 KRYEACFLFKSEEIEY-----KGSLEEVKKSLEFFGATDVVSNFIGERALEYPIK----KQARGRYEIIEFSMEGNNLKE 73  Borrelia burgdorferi B31
P28778   1 MLYELIGLVRITNSNApkleAKELSSTIGKLIIQNRGVVRDIVPMGIRYLPKIMKkdqeKHFRAYHFLMLFDSSAAVQSE 80  Saccharomyces cerevis...
1P6G_F  74 LETTFRFNDAVIRSMVMRTKH 94  Escherichia coli K-12
Q8XDI1  74 LETTFRFNDAVIRSMVMRTKH 94  Escherichia coli O6
P44375  74 LETTFRYNDAVLRSLVIHTKH 94  Haemophilus influenzae Rd KW20
P21468  75 FDRLAKISDDIIRHIVVKEEE 95  Bacillus subtilis subsp. subtilis str. 168
P56013  75 LERLYRINEDVLRFIVIKYES 95  Helicobacter pylori 26695
P73636  77 IERDMRLNDNVMRFLSIKLTP 97  Synechocystis sp. PCC 6803 substr. Kazusa
P75543  72 FKRTANINKQVLRELIINLER 92  Mycoplasma pneumoniae M129
P47336  72 FKRAANINKQIIRELIINREK 92  Mycoplasma genitalium G37
O51142  74 FESRLKLIRNLLRYMILVKIV 94  Borrelia burgdorferi B31
P28778  81 ILRTLKKDPRVIRSSIVKVDL 101 Saccharomyces cerevisiae S288c
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