1JCL


Conserved Protein Domain Family
deoC

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TIGR00126: deoC 
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deoxyribose-phosphate aldolase
Deoxyribose-phosphate aldolase is involved in the catabolism of nucleotides and deoxyriibonucleotides. The catalytic process is as follows: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. It is found in both gram-postive and gram-negative bacteria. [Purines, pyrimidines, nucleosides, and nucleotides, Other, Energy metabolism, Other]
Statistics
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PSSM-Id: 272921
View PSSM: TIGR00126
Aligned: 7 rows
Threshold Bit Score: 279.733
Threshold Setting Gi: 729314
Created: 7-Oct-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JCL_A  11 RALKLMDLTTLNDDDTDEKVIALCHQAKTPvgNTAAICIYPRFIPIARKTLKeqGTpEIRIATVTNFPHGNDDIDIALAE 90  Escherichia coli
P39121   2 SLANIIDHTALKPHTQKADILKLIEEAKTY--KFASVCVNPTWVELAAKELK--GT-GVDVCTVIGFPLGANTTETKAFE 76  Bacillus subtilis sub...
P44430   5 QLAQYIDHTALTAEKNEQDISTLCNEAIEH--GFYSVCINSAYIPLAKEKLA--GS-NVKICTVVGFPLGANLTSVKAFE 79  Haemophilus influenza...
O26909  11 ELASLIDHTNVRADATENDIERLCREAVSY--GFRCAVVTPTNVRLAAELLE--GT-DVTVCSVVGFPAGVSTPRVKALE 85  Methanothermobacter t...
P47296   4 EYNRIIDSTLVKADTLPHEIDTLCADAHKY--QFFAVCVNPSYVSYAKNILK--NT-AVQLCCVVGFPLGQTTQKQKVYE 78  Mycoplasma genitalium...
P73618   8 DLAPYIDHAALDPATTREAIATCCAQALHH--KFVAVCVYPSALSQAVELLR--GK-KVEICAVIGFPSGASTSGSKLYE 82  Synechocystis sp. PCC...
P00882  10 RALKLMDLTTLNDDDTDEKVIALCHQAKTPvgNTAAICIYPRFIPIARKTLKeqGTpEIRIATVTNFPHGNDDIDIALAE 89  Escherichia coli
1JCL_A  91 TRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVkaCKEACAAA--NVLLKVIIETGELKDEAlIR-KASEISIKAGADFI 167 Escherichia coli
P39121  77 TKDAISKGATEVDMVINIAALKDKEDDVVEADI--RGVVEAVAg-KALVKVIIETCLLTDEE-KE-RACRLAVSAGADFV 151 Bacillus subtilis sub...
P44430  80 TQESIKAGANEIDMVINVGWIKSQKWDEVKQDI--QAVFNACN--GTPLKVILETCLLTKDE-IV-KACEICKEIGVAFV 153 Haemophilus influenza...
O26909  86 ASEAVENGAGEVDMVMNIGAMKSGNRELVYRDI--SGVVDAA---GVPVKVILETAYLTDKE-KV-EACLISKEAGAAFV 158 Methanothermobacter t...
P47296  79 AKIAIKEGADEIDMVMNIAEFK-KRCACVITEI--RAVKKVCG--KRKLKVIIETALLTNDE-IK-DAVNVCIDGNADYV 151 Mycoplasma genitalium...
P73618  83 AQEAAELGATELDVVINLGLLKDGNTEAVYNDI--APIVEAT---GLTVKAILEMGRLTESE-KR-LAAEICLDAGVQYL 155 Synechocystis sp. PCC...
P00882  90 TRAAIAYGADEVDVVFPYRALMAGNEQVGFDLV--KACKEACAaaNVLLKVIIETGELKDEA-LIrKASEISIKAGADFI 166 Escherichia coli
1JCL_A 168 KTSTGKV-AVNATPESARIMMEVIRDmgvekTVGFKPAGGVRTAEDAQKYLAIADELFGADWADAR 232 Escherichia coli
P39121 152 KTSTGFS-TGGATKEDIALMRKTVGP-----DIGVKASGGVRTKEDVDTMVEAGASRIGASAGVSI 211 Bacillus subtilis subsp. subtilis s...
P44430 154 KTSTGFN-KGGATVEDVALMKNTVG------NIGVKASGGVRDTETALAMIKAGATRIGASAGIAI 212 Haemophilus influenzae Rd KW20
O26909 159 KTSTAYGgLAGATVEDVMLMRKTVGD-----EMGVKASGGIRDLETALAMIDAGADRIGTSTGVQI 219 Methanothermobacter thermautotrophi...
P47296 152 KTSTGFS-FRGASLEDVQIMNNAAAN-----LIKIKASGGIKTAKQFIDLFQAGASRIGTSNAVQI 211 Mycoplasma genitalium G37
P73618 156 KTSTGWG--KGATVADVRLLHQISQG-----RVGIKASGGIRTVEQAIALIEAGATRLGTSRGVEL 214 Synechocystis sp. PCC 6803 substr. ...
P00882 167 KTSTGKV-AVNATPESARIMMEVIRDmgvekTVGFKPAGGVRTAEDAQKYLAIADELFGADWADAR 231 Escherichia coli
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