1ZUW,2JFN,2JFX


Conserved Protein Domain Family
glut_race

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TIGR00067: glut_race 
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glutamate racemase
This family consists of glutamate racemase, a protein required for making the UDP-N-acetylmuramoyl-pentapeptide used as a precursor in bacterial peptidoglycan biosynthesis. The most closely related proteins differing in function are aspartate racemases. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Statistics
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PSSM-Id: 272885
Aligned: 9 rows
Threshold Bit Score: 317.427
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1ZUW_A         6 IGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLeNHHIKMLVIACNTATAIALDDI 85  Bacillus subtilis
O51127         8 IIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLIEKLKkIYNIGALVLACNTISVSVYNKL 87  Borrelia burgdo...
P94556         6 IGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLeNHHIKMLVIACNTATAIALDDI 85  Bacillus subtil...
P73737         9 IGVFDSGVGGLTVLRELYRQLPKESILYFGDTARLPYGKRSPQVILQYVREILTWMA-AEEVKMVIMACNTSSALALETV 87  Synechocystis s...
O05412         3 IGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYIFNAAEFLA-SQNIKALVIACNTATSIAIEDL 81  Bacillus subtil...
WP_001311287  28 VLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQeRYPLALAVVACNTASTVSLPAL 107 Escherichia coli
P56068         3 IGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFK-PHQIKLLIVACNTASALALEEM 81  Helicobacter py...
2JFN_A        24 VLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQeRYPLALAVVACNTASTVSLPAL 103 Escherichia col...
2JFX_A         3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFK-PHEIELLIVACNTASALALEEM 81  Helicobacter py...
1ZUW_A        86 qrSVGIPVVGVIqPGARAAIKVT--DNq--HIGVIGTENTIKSNAYEEALlALNPdLKVEnlACPLLVPFVESGKFLDQT 161 Bacillus subtilis
O51127        88 --NFVFPVVYTL-PDVSSVSDLV--LK---RVLLIATNTTLESKFVKDQV-NIHNdLIVK--AAGELVNFVEYGENYKKY 156 Borrelia burgdo...
P94556        86 qrSVGIPVVGVIqPGARAAIKVT--DNq--HIGVIGTENTIKSNAYEEALlALNPdLKVEnlACPLLVPFVESGKFLDKT 161 Bacillus subtil...
P73737        88 qqEFNMPILGVIlPGARAAVRQGr------RIGVISTPATAASNAYRHAIhEITPdALVWqmACPEFVPLIEQNRLHDPY 161 Synechocystis s...
O05412        82 rrNFDFPIIG-IePAVKPAINKC--TEerkRVLVVATNLTLKEEKFHNLVkEIDHhDLVDclALPGLVEFAENFDFSEDK 158 Bacillus subtil...
WP_001311287 108 reKFDFPVVGVV-PAIKPAARLT--ANg--IVGLLATRGTVKRSYTHELIaRFANeCQIEmlGSAEMVELAEAKLHGEDV 182 Escherichia coli
P56068        82 qkHSKIPVVGVIePSILAIKRQV--KDknaPILVLGTKATIQSNAYDNALkQQGY-LNVShlATSLFVPLIEESILEGEL 158 Helicobacter py...
2JFN_A       104 reKFDFPVVGVV-PAIKPAARLT--ANg--IVGLLATRGTVKRSYTHELIaRFANeCQIEmlGSAEMVELAEAKLHGEDV 178 Escherichia col...
2JFX_A        82 qkYSKIPIVGVIePSILAIKRQVedKNa--PILVLGTKATIQSNAYDNALkQQGY-LNIShlATSLFVPLIEESILEGEL 158 Helicobacter py...
1ZUW_A       162 ADEIVKTSLYPLKdt--sIDSLILGCTHYPILKEAIQRYMGEHVNIISS--GDETAREVSTILSYKGLLNQSPIA-PDHQ 236 Bacillus subtilis
O51127       157 ALRCLEALKFEVVnt--gREIVFLGCTHYLHLKVMIEDFLKIPVYENREl-VVKNLIRSMNFSEHKGNYYKNDFDfVDDE 233 Borrelia burgdo...
P94556       162 ADEIVKTSLYPLKdt--sIDSLILGCTHYPILKEAIQRYMGEHVNIISS--GDETAREVSTILSYKGLLNQSPIA-PDHQ 236 Bacillus subtil...
P73737       162 TLEVAKGYLQPLLda--dIDTLVFGCTHYRHLTPVFQQILPSHIRLVDP--ASHVVKAARQELEVMG-LRNSEMS-IATR 235 Synechocystis s...
O05412       159 IIKYLKNELSSFDlk--qYGTIVLGCTHFPFFKNSFEKLFGIKVDMISG--SVGTAKQLKKVLADRNQLGKGSGS---IT 231 Bacillus subtil...
WP_001311287 183 SLDALKRILRPWLrmkepPDTVVLGCTHFPLLQEELLQVLPEGTRLVDS--GAAIARRTAWLLEHEAPDAKSADA--NIA 258 Escherichia coli
P56068       159 LETCMRYYFTPLEi---lPEVVILGCTHFPLIAQKIEGYFMEHFALSTPplLIHSGDAIVEYLQQNYALKKNACAfPKVE 235 Helicobacter py...
2JFN_A       179 SLDALKRILRPWLrmkepPDTVVLGCTHFPLLQEELLQVLPEGTRLVDS--GAAIARRTAWLLEHEAPDAKSADA--NIA 254 Escherichia col...
2JFX_A       159 LETCMHYYFTPLEi---lPEVIILGCTHFPLIAQKIEGYFMGHFALPTPplLIHSGDAIVEYLQQKYALKNNACTfPKVE 235 Helicobacter py...
1ZUW_A       237 FLTTGAR--DQFAKIADDWFGH 256 Bacillus subtilis
O51127       234 FYLTENKnlTFYQNFCKKYNLR 255 Borrelia burgdorferi B31
P94556       237 FLTTGAR--DQFAKIADDWFGH 256 Bacillus subtilis subsp. subtilis str. 168
P73737       236 FTVSGCP--QQFAELSHQWLGF 255 Synechocystis sp. PCC 6803 substr. Kazusa
O05412       232 FFNSGHK--IVDQEVISKYKRL 251 Bacillus subtilis subsp. subtilis str. 168
WP_001311287 259 FCMAMTP--GAEQLLPVLQRYG 278 Escherichia coli
P56068       236 FHASGDV--VWLEKQAKEWLKL 255 Helicobacter pylori 26695
2JFN_A       255 FCMAMTP--GAEQLLPVLQRYG 274 Escherichia coli BW2952
2JFX_A       236 FHASGDV--IWLERQAKEWLKL 255 Helicobacter pylori J99
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