1JCU,1KK9


Conserved Protein Domain Family
TIGR00057
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TIGR00057: TIGR00057 
Click on image for an interactive view with Cn3D
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family
Has paralogs, but YrdC called a tRNA modification protein. Ref 2 authors say probably heteromultimeric complex. Paralogs may mean its does the final binding to the tRNA. [Protein synthesis, tRNA and rRNA base modification]
Links
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Statistics
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PSSM-Id: 272879
Aligned: 11 rows
Threshold Bit Score: 228.751
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1JCU_A         6 ITRKNPSPD--VLEEAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFRVKGRSPHKPVSICVSCVDEIPRFS-R-PS 81  Methanothermoba...
Q60369        10 IYELNEEERkkVLEFLKKEILNGKIVICGTDTLYGISANALNEKAVRKVYNIKRREFNKPLSICVRDKNEIEKYA-Y-VN 87  Methanocaldococ...
P45831         8 FDCADPDQRarGIASAVAALKGGRLVVMPTDTVYGIGADAFDRAAVAALLSAKGRGRDMPVGVLVGSWHTIEGLV-YtMP 86  Mycobacterium l...
P39153        10 VTDELSTNDp-QIAQAAALLRENEVVAFPTETVYGLGANAKNTDAVKKIYEAKGRPSDNPLIVHIADISQLEDLT-GpAP 87  Bacillus subtil...
WP_000536174  19 IHPDNPQQR--LINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYS-F-VD 94  Enterobacteriaceae
WP_010871362   7 LHPETPQQR--TVEMICKSLRQGAIMLYPTDTVYAIGCDLNDKNAVQRVRQLKQLSNNKPLTFLCSSLSNIAEYA-V-VA 82  Synechocystis s...
WP_010878284   2 AEVLEPSRE--GIRKAVAVLRAGGIVAFPTETVYGMGCDATNEEALRRLYEIKGRSLNKPFIVGVWSRDYVGKIA-E-VD 77  Archaeoglobus f...
P45103         7 IHPENPQAR--LINQAVEILQKGGVIVYPTDSGYALGCMMGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELSTYA-R-VN 82  Haemophilus inf...
WP_014540370   2 ISTEIISSS--QIQKAAKLIKMGELVVFPTETVYGIGANAYNEDAVKMIFLVKKRPINNPLIVHVDTVKKIKELSeY-IP 78  Lyme disease sp...
WP_010880387   1 -MILKASKE--ALKEAVEILKKGGIIVAPTDTLYGILADATNEEAVKRLYKIR-RPSGKPFLVLLPDESWLEKLC-LdVK 75  Aquifex aeolicus
1KK9_A        22 IHPDNPQQR--LINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAXERICRIRQLPDGHNFTLXCRDLSELSTYS-F-VD 97  Escherichia coli

1JCU_A        82 GDAMELMERILPGPYTVVLERNE--LIPDVIT-Gg-sSRVGIRVPDDEICRRIAARFp--VTATSANISGKPPSP--RLE 153 Methanothermoba...
Q60369        88 DLAKKIIDKFLPGPLTIILKKKP--GIPDIVA-K---DYIGIRIPDEPIIRELSIVP---LTTTSANISGKESPT--TVD 156 Methanocaldococ...
P45831        87 DGARELIRAFWPGALSLVVVHAP--SLNWDLG-Da-hGTVMLRMPLHSVAIELLCEVg-pMAVSSANVSGQPAAV--DVD 159 Mycobacterium l...
P39153        88 EKAKTLMKRFWPGALTLILPCKPdaLSPRVTA-Gl--ETVAIRMPDHPLALALIRESglpIAAPSANLSGKPSPT--KAE 162 Bacillus subtil...
WP_000536174  95 NVAFRLMKNNTPGNYTFILKGTK--EVPRRLL-QekrKTIGMRVPSNPIAQALLEALgepMLSTSLMLPGSEFTEs-DPE 170 Enterobacteriaceae
WP_010871362  83 DDAYRLMRKLIPGPYTFLLPATK--QVPKLVVePk-rKTTGIRVPDRPICQEILQSLgnpIISTSAHLPDQDEFV--MAE 157 Synechocystis s...
WP_010878284  78 ERAEKLMEAFFPGPLTLVLKSKG--VMPSLLS-Pk--GKIAVRMPAHEVPLQLMEMLrkpIVVPSANLSGRPSLM--RWE 150 Archaeoglobus f...
P45103        83 NTAYRLIKNNTPGRYTFILTATK--ELPRRLM-TskrKTIGLRVPDNKIALDLLSALgepILSCSLMLPNEEHTTqsDPE 159 Haemophilus inf...
WP_014540370  79 KSALMLIKKFSPGPLTYVLKKSI--KISRFVS-Gn-lDTVAIRIPANKTALSLIKASkvpIVAPSANISKRPSST--NFE 152 Lyme disease sp...
WP_010880387  76 EEHKKLLK--VEG-LTLVFRKTC--DKLDYVS-K---GTLAVRLPQKGFIRDLLSELkkpVVAPSVNPEGKKPAE--SVE 144 Aquifex aeolicus
1KK9_A        98 NVAFRLXKNNTPGNYTFILKGTK--EVPRRLL-QekrKTIGXRVPSNPIAQALLEALgepXLSTSLXLPGSEFTEs-DPE 173 Escherichia coli

1JCU_A       154 EI--VRDLD-AVDLVLDAGd---CLDMEPSTVIDLTVNP-PRVLRRGKG---PLDPVL 201 Methanothermobacter thermautotrophicus
Q60369       157 EI--DKEVLkKVDYVIDIGk---CKYSKPSTIIKIEDDK-IISIREGVI---PIQKLA 205 Methanocaldococcus jannaschii DSM 2661
P45831       160 GA--RGQLGeLVGVYLDAGp---SAQQAASTIVDLTEAT-PRILRAGPVsvaRIAEVL 211 Mycobacterium leprae TN
P39153       163 HV--AHDLDgRIAGIVDGGp---TGIGVESTVLSCADDI-PVLLRPGGItkeQIEAVI 214 Bacillus subtilis subsp. subtilis str...
WP_000536174 171 EI--KDRLEkQVDLIIHGG----YLGQKPTTVIDLTDDT-PVVVREGVG---DVKPFL 218 Enterobacteriaceae
WP_010871362 158 KAklFDLFDkLVDIIIDDDr---EPGYQTSSIIDFTDKE-PKVVREGLGw-eTLRDLF 210 Synechocystis sp. PCC 6803
WP_010878284 151 HV--VEELGsRIDAVVK-Ge---CKVGVESTIVDLTETP-AKVLRVGAVs-vESIKKH 200 Archaeoglobus fulgidus
P45103       160 EI--RDRLEhQVDLIIHGG----YLGQEPTTVVDLTEES-PVILREGSG---STAPFI 207 Haemophilus influenzae Rd KW20
WP_014540370 153 MA--LKELNgLVRGIIKPEenkdFNIGIESTVVGFDLKDnVLILRPGAItkkMIENEL 208 Lyme disease spirochete
WP_010880387 145 EA--YNYFGnKVDLYIDAG----VIKGEPSTILDLTEG--VKILREGKVkkeEIEKIL 194 Aquifex aeolicus
1KK9_A       174 EI--KDRLEkQVDLIIHGG----YLGQKPTTVIDLTDDT-PVVVREGVG---DVKPFL 221 Escherichia coli
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