1UEB


Conserved Protein Domain Family
efp

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TIGR00038: efp 
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translation elongation factor P
function: involved in peptide bond synthesis. stimulate efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (by similarity). The trusted cutoff of this model is set high enough to exclude members of TIGR02178, an EFP-like protein of certain Gammaproteobacteria. [Protein synthesis, Translation factors]
Statistics
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PSSM-Id: 272867
Aligned: 88 rows
Threshold Bit Score: 220.795
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1UEB_A         2 ISVTDLRPGTKVKMDGGLWECVEYQHQKLGRGGAKVVAKFKNLETGATVERTFNSGEKLEDIYVETRELQYLYPEGEEMV 81  Thermus thermop...
WP_011416782   2 YSASDLRKNLRIKLEGDPYIITEFNFVKPGKGQALYRCKLKNMITGNQFERTFRSVDNFEAADLQEKKMQFLYTEEDRYC 81  Syntrophus acid...
WP_011188090   2 lSASDLRKGLKLDIEGSPYIIIDFDFSKPGKGQALYRCKMRNMITGNQLVKTYRSSDKFEKASLEERKMQFLYSQGEEYH 81  Desulfotalea ps...
WP_011342255   2 lTCSDLRKGTKLMIDGEPHVIVQFDFTKPGKGQALYKCKLRNMITGSLFDRTYRSGESFEPAALEERDMQYLYQDETGYV 81  Pelobacter carb...
WP_004193484   2 KTAQELRVGNVVMIGNDAWVVSKTEYNKSGRNAAVVKMKLKNLLNGGGQESVYKADDKFEVVVLDRKEVTYSYFADPMYV 81  pseudomallei group
WP_011496431   2 KTAHEIRPGNVIMLDGSPWVVQKTETTRSGRNAAIVKLKLKHVLLDSGTEQTFKGEDKMDVIVLERLDCTYSYFADPMYV 81  Shewanella deni...
WP_002219406   2 KTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNLLTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYV 81  Neisseria
WP_000172195   3 LGITEVKKGMVLKVEGDLYSVVKTEFVNPGKGSAFIRTKLKNLTRNSSIERTFKAAEKLESVELEKRNMTICYTEGDDII 82  Leptospira inte...
WP_002656805   4 VKSSEIEKGSFLLIKGAPHIVLEREFSKTGRGGAIVRLKLKNLKNKFVIRETLKGADTAEAIEIYEVSAQYLYKDKDVLV 83  Lyme disease sp...
WP_002671939   2 IRGGDIAKGTVLLNKGTPYLVVEREFVNPGKGAAFARVKMKNLRDGSVLMQTIKTADTVEDAVVDTHKCQYQYKDGDQFM 81  Treponema denti...
1UEB_A        82 FMDLETYEQFAVP---RSRVVGA-EFFKEG--MTALGDMYEGQPIKVTPPTVVELKVVDTPPGVRGDTVSGGS-KPATLE 154 Thermus thermop...
WP_011416782  82 FMDNTSYEQIFLT---ADQVGDAaHFLIDN--LEVEILLFEDKPLGISLPNFVDLVVTKADPWAKGDTVSGNT-KPVTLQ 155 Syntrophus acid...
WP_011188090  82 FMDNENYDQLFIT---KDMLGDNiYFLQDN--MDVDVLFFDEKPIDITLPIFVNLEVTRADPWVKGDTSGTDT-KPITVE 155 Desulfotalea ps...
WP_011342255  82 FMDQKSYEQTTLG---EEALGDQkYFLVDN--MEVKILMFGDRGIGITLPNFVNLRVTMAEPWVKGDTAAGNN-KPATVE 155 Pelobacter carb...
WP_004193484  82 FMDAD-YNQYEVE---AEMMGDAlNYLEDG--MACEVVFYNEKAISVELPTILVREITYTEPAVKGDTSSGKVlKNAKLA 155 pseudomallei group
WP_011496431  82 FMDAD-YNQYDVE---ADNLGDAaAYIIDGmeETCQVTFYEGKAISVELPTHIVREVIYTEPSARGDTSGKVM-KPATIT 156 Shewanella deni...
WP_002219406  82 FMDEE-FNQYEIE---ADNIGDAlKFIVDGmeDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVM-KTARLV 156 Neisseria
WP_000172195  83 FMDSNDFEQMPVS---KEYVEDIlPFLKEE--TPMEVTFYEGKPIGVIPPNFSILEVTYAEEGLKGDTSGTAQ-KRITVE 156 Leptospira inte...
WP_002656805  84 FMDLETYDQVSLDlkeSANLQDKvPFLQES--EIYSLVTFDNVVIDIKLAPKIAFEVVEVEAAVKGDTVTNAM-KNITLN 160 Lyme disease sp...
WP_002671939  82 FMDTESFESISVP---AETIGDKeHYLREG--DEYDILIWENEPIDVRIPTKMIFIVEQSENYIKGDTVSGAT-KPIVTE 155 Treponema denti...
1UEB_A       155 TGAVVQVPLFVEPGEVIKVDTRTGEYVGRA 184 Thermus thermophilus
WP_011416782 156 TGYQIMVPPFIEEGEKIRVDTRTGEYLTRV 185 Syntrophus aciditrophicus
WP_011188090 156 TGYQLQVPPFVEQGDKIQIDTRTGQYVTRV 185 Desulfotalea psychrophila
WP_011342255 156 TGYNLQVPSFVEEGTLIQIDTRTGEYVTRV 185 Pelobacter carbinolicus
WP_004193484 156 TGFELQVPLFCNTGDKIEIDTRTNEYRSRA 185 pseudomallei group
WP_011496431 157 GGGTVTVADFVKVGDKIEIDTRTGEFKKRA 186 Shewanella denitrificans
WP_002219406 157 GGTEIQVMSYIENGDKVEIDTRTGEFRKRA 186 Neisseria
WP_000172195 157 TGGEINVPIFVKQGDVIKIDLRDLTYVERV 186 Leptospira interrogans
WP_002656805 161 TGLVVKAPLFINVGDKVLINSETKEYAERI 190 Lyme disease spirochete
WP_002671939 156 TGLVVRVPLFIKQGEKILVNTETNEYQERV 185 Treponema denticola
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