Conserved Protein Domain Family
PTZ00228

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PTZ00228: PTZ00228 
variable surface protein Vir21; Provisional
Statistics
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PSSM-Id: 240320
Aligned: 5 rows
Threshold Bit Score: 465.835
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
156092607  25 FYKIYNEFNWDCRDGRYSDLGVSCFNGSSNGWTKFPEVTNILKKLYSNLYRIYVTNGGDNNDYFDDNEDEIDKMGYFYVK 104
156092576   1 FYKIYNEFLKPCTAYRNDNKASCYKEESLGKIEASLDVTNLLKDLYSHLYRIYETVEMYTNDYFEHVRLNNEKLGCLCLK 80 
156092697  24 FYEXYNVFYESCE--NFADNQASCYTGSKISWNSSV-ISEIIEALYSNLFRIYDSITGTNNTYFENISSKDEKICCTSLK 100
156092916  24 FYTIYKEFDKSCDSINSGD---VCYKGSIEELSQFPKVQDLLKNLYSNLHKIISTVKENTNVYFGNVNPDDKKFCCTYLK 100
156093124  25 FYKIYNELNWDCNSVNYNDSGSSCFKGTLDKWTNFTDVNDLLKELYSTVYRIYIAIIGNNNDYFDKHQSELKKIGYIYLK 104
156092607 105 YWLYDQIFNNNLNDSKIKELYQGWNNYVKKEVEHKSNNPCIFYSLKKDEIKNIRKIYAFSTLLYQNVNKFK-TNYNNNSK 183
156092576  81 HWLYDQITMNVLKEPQINELFQGWEAYIKEKTKYHNLKRCVFYNLNENEINRIKKIYVLNTILYSNSNNSE-AFVSDQGE 159
156092697 101 YWLYDQILTKDLEETDINAIFKGWESDLKGKIKDRSVDPCIFFNLKKDEINKLKNIYSLYAIFYGNNKYKQ-DCNSNTCK 179
156092916 101 YWLYDKIITEGLDGNEIKKLFEGWEKHVKSKITYNSLEPCLFHNLNMDEIKKIKNIYAFNTLLYPNAEKFK-NCAHNECK 179
156093124 105 YWLYDKIMKANFDDSKIEKLFQGWNNFVEREIKRKPNNLCIFYSLKKDEIKKFQKIYAFNTILYASDKKSSiTCGNNQCK 184
156092607 184 YMDYFgegldaffssINKCSSEKHTDNYCKEFKEFLNKCKDESLNAGILIYHGNNVYSPDDSNKYLLSIETYENKPLYII 263
156092576 160 YMDYF----------WRSCSRKVPMDNYCKEFDEFVNICKDESLDSGISIYDENTKSTADGAKKYLLYSQKYKEQLLYVY 229
156092697 180 YLKYFgkgldefinsINKCSSDSLNNEYCNELKEFLDLCKEDNEHAGISIHEESTKSKSEIAGKHLLSVVKYQNKPLYIY 259
156092916 180 YMEYFgeglnelnnsINNCYSNIPSVNYCNELNEYLNICKADDKYAGTSIYHEYNEKVLGSGKKYPLSVEEYENQLLLIY 259
156093124 185 YMDYFeealtefinsIKKFSSVSSNNEYCKEFNEFLNVCKDENPYAGISINYEYKSYSSDHSKKY-LSVEEYKENPLYIY 263
156092607 264 LKDKKMLNFLKTSNFLSNKnRNTIAATSAVGSAIALSSIFYYFYKFRP--FGRNLRKGKGGN---IVDINERAHDSLLHT 338
156092576 230 IKNENLLNFVKTSDFLSNK-STTIAVTSVVGSAIGLSSIFYYFYKFTP--FGSTLRKGQRKN---IVNIDGEAHNELSYT 303
156092697 260 LKDKKMLNFLKTSDFISNKnRTTIAATSVVGSAIGLSSIFYYFYKFTP--FGSSLRRGKGKN---IVNIDEESHNSLLYK 334
156092916 260 VKNKNWIYYGKNAHLFNPKnKIITAVASATFSVVGISTIFFYLYKVNNtyFGSRFFNRKGKNkkiLVDIDDKERNTLLYT 339
156093124 264 IKNNEWIKFDKIAHLLNTQnSTTIAATSVVGSAIELSSIFYYFFKFTP--FGSSLRTGKGKN---IVNIDQEAHDALLYT 338
156092607 339 PDTEHMPFQKQGI 351
156092576 304 SDIKQSSFKNREY 316
156092697 335 SNTEQLPLHNREY 347
156092916 340 SNNQQIPSKNREY 352
156093124 339 SDAEQTPFQSRKY 351
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