Conserved Protein Domain Family
PTZ00109

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PTZ00109: PTZ00109 
DNA gyrase subunit b; Provisional
Statistics
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PSSM-Id: 240272
Aligned: 6 rows
Threshold Bit Score: 1222.43
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
221061813   52 CPAPHSDVATFSRKrntc----------------------dnkKLKKKQQYYFFTNIAR---AHKIKAKKQEQHKNRHP- 105 
156095793    1 MEIPQKGGNSFDRK-----------------------------KVKKRKQYFFFTNIRR---AEIIKGKGREQYKSRRP- 47  
156087396   87 ANIKSRGLRTYSTTees-----------------------leeDLINETDESVVPDNTEleaASSVNQEYVELQDGPEVp 143 
84997852    47 INIPNLVNLSTSGDn---------------------------fKTNNSKINKFNLKDQNiedAVPSPVTDGDEKGENVNq 99  
71034009    47 INIRNLDNHVSSRDn---------------------------iKTVNKNTYKFQLNNQNtddFIPSSVTDDDQREENVQq 99  
124806668   39 INIFNCMKRKYDKKlsssvvntndkalyessilkyyylldkykKPNRKKIYGYISNVSRfplEEERKRKKLEHMNKRNI- 117 
221061813  106 -FRCKDYDAKDIVILEGLEAVRKRPGMYIGNTDVKGLHQILFEIIDNSVDEYNNFECNEIKIVIHEDESVTIEDNGRGIP 184 
156095793   48 -FRCNDYDAKDIVILEGLEAVRKRPGMYIGNTDVKGLHQILFEIIDNSVDEYNNFECNEIKIVIHQDESVTIEDNGRGIP 126 
156087396  144 rPRLSEYSTDDIVVLQGLEAVRKRPGMYIGNTTETGLHQLLFEILDNSVDEYLAGCCNKITVTLRADGSAEISDNGRGIP 223 
84997852   100 lQDTGEYSSDDIIVLEGLNAVRKRPGMYIGNTGERGVHQLLYEVLDNSVDEYLAGFCNRITVSLMKDGSVEVSDNGRGIP 179 
71034009   100 lQDNEEYRSDDIIVLEGLNAVRKRPGMYIGNTGERGVHQLLYEVLDNSVDEYLAGFCNKITVSLMNDGSVEVSDNGRGIP 179 
124806668  118 -YPCYNYDAKDIVILEGLEAVRKRPGMYIGNTDVKGLHQILFEIIDNSVDEYNNFECNTIKVVIHKDDSVTIEDNGRGIP 196 
221061813  185 CDIHEKTKKSALETVLTVLHSGAKFVDedtaadlvertsvggmssEIGEDERGGKGEQKSKAKVVEKLDe---------- 254 
156095793  127 CDVHEKTKKSALETVLTVLHSGAKFVDdeadaqleggssvgglsdGGGEDQRGATGEHKGEHKGEQKAKarvaergaekl 206 
156087396  224 CDVSEKTGKSGLETVLTVLHSGGKFND------------------TTSKPTPEDQVDEFYDTHISRKFR----------- 274 
84997852   180 CDISPKTGKSGLETVLTVLHSGGKFQD------------------IFPPNSTSMSSEDQNDLKSRKKGE----------- 230 
71034009   180 CDISPKTGKSGLETVLTVLHSGGKFQD------------------IFPPNSISVKPDDKNDSKSSKKGS----------- 230 
124806668  197 CDVHEKTKKSALETVLTVLHSGAKFFDdemddeidnnmnntgntnTSEKNNRDNISNNNNNNNNNKRTK----------- 265 
221061813  255 --kNSKKKNPKEASQKSASQMYRFSSGLHGVGLSVANALSSFMKVKVFRGGKIHSIELEKGKVVTPLSVRECP------- 325 
156095793  207 dekKSPQKTPKEAPQKSPSQMYRFSSGLHGVGLSVANALSSFMKVKVFRRGKIHSIELEKGKVVTPLSVRDCP------- 279 
156087396  275 ---SQHVRGLRKRLKDASSNPYEYASGLHGVGLSVVNALSAWLRADVYKGTKQYSIQLSRGMVTEPLSVSKCA------- 344 
84997852   231 -------------KEHEEKKVYEYSSGLHGVGLSVVNALSELLIVDVYKGPKSYHIELSKGNIVKPLAEFSEPetteksn 297 
71034009   231 -------------KELEEKRIYEYSSGLHGVGLSVVNALSEFLIVDVFKGSKSYHIELSKGNITKPLTEFSEPettdqpn 297 
124806668  266 ------------KNSKESAQKYKYSSGLHGVGLSVANALSSFMKVKVFRNNKIYSIELEKGKVTKELTITNCP------- 326 
221061813  326 --VSKRGTQIHYKPD-HDIFKNTIRH-----------------------------NAELIKNRIHQLAYLNDRLTFYFYD 373 
156095793  280 --VSKRGTQIHYRPD-PTIFKNTIRH-----------------------------NAEMIRNRIHQLAYLNDRLSFYFYD 327 
156087396  345 ---KRTGTTISFMPDyDHVFIAHHDHqvdtecp----------------gcasafNHDTVRNRIEELSYVNPMLTLRLVD 405 
84997852   298 nnLKRYGTTIRFLPDyKNIFKTHHQHtetekeedydtttnksgldtkcsgckngfILELIKTRAKELSYLNPGLSIKLVD 377 
71034009   298 pnLKKYGTTIRFLPDyKHIFKTHHQHteteneensgtstdkndldtkcsgckngfILDLIKTRAKELSYLNPGLFIKLVD 377 
124806668  327 --INKRGTQIHYKPD-SSIFKSSTKH-----------------------------NSDLIKNRIHQLAYLNEKLTFYFYD 374 
221061813  374 ERSAKKVPtsvhlakgneadevdkre------------------------------------dkttdavnttvehnnldF 417 
156095793  328 ERAAKKAAaeaenaanaadladv------------------------------------------adhagntaehnnldF 365 
156087396  406 ERLVNEDG-----------------------------------------------------------------------S 414 
84997852   378 YRITDENN-----------------------------------------------------------------------E 386 
71034009   378 YRISNENN------------------------------------------------------------------------ 385 
124806668  375 ERSENKNSiyiskgnksneiiknkkkntsidnenednknntsnyvsnntlkddvsnenenmsdnlvnknieitdynnldF 454 
221061813  418 YPYEVIKHEGGLNEYMESLTKNKASLFKDSNkIISISCHQKNVHIDLRIKWTQGQYHEHIVSFVNNVNTTdGGTHVDAMK 497 
156095793  366 YPYEVIKHEGGLDEYMESLTKNKASLFKDSNkVISITCHHKNVHIDLRLKWTQGEYHEHIISFVNNVNTTdGGTHVDAMK 445 
156087396  415 FHEETFMHKGGTREFLQDIIKDRVPLYKSAN-IINIRGKSGGVEVEVSLSWAAETYAAQLKGFANNVSTS-AGTHIEGFK 492 
84997852   387 PWEETYRNTGGTRSFLEELIKDKTPLYKPIS-YITIKGVISNINVEVSFSWSLESYTALIKGYANNVSTI-AGTHIDGFK 464 
71034009   386 --VKLYHNTGGTRSFLEELIKDKTPLYKPIS-YITIRGVINNVNVEVSFSWSLESYTALIKAYANNVSTI-AGTHIDGFK 461 
124806668  455 YNYEIIKHEYGLNEYITNITKNKTNLFKDNDkIISISCYHKNIYIDLRMKWLSNQYNENIISFVNNVNTTdGGTHVDALK 534 
221061813  498 YAISRCVNFNIKKNEATK-NFVNIPGEYIREGMTAILSIKMNNPEFEGQTKTKLGSHFLKPILESAIFEKLSEIFDFEPN 576 
156095793  446 YAISRCVNFNIKKNEATR-NFVNIPGEYIREGMTAILSIKMNNPEFEGQTKTKLGSHFLKPILESAIFEKLSEIFDFEPN 524 
156087396  493 AAITKAVNHACRRAGLFKhKAPSISGEFIREGLTAIISVKLMGAEFDGQTKSKLGNQIARTAVERIVSYQMNEILEKHPQ 572 
84997852   465 ISITRCVNGLLKKYGYFKgNVKPLNGEFIREGMTAVISVKLTGAEFDGQTKTKLGNALVKTVTEKIVNEQFTNILENNKE 544 
71034009   462 TSITRCVNGLLKKYGYFRgNVKPLNGEFIREGMTAVISVKLTGAEFDGQTKTKLGNALVKTVTEKIVNEQFTNILENNKE 541 
124806668  535 YAVSRCVNYNIKKNEMIK-NFVNIPGEYIREGLTAILSVKMNNPEFEGQTKTKLGSHHLKSILESVIFEKLSEIFDFEPN 613 
221061813  577 LLNTIYLKALQAKASDEEAKAARDLIRSKNNQYYSTILPGKLVDCISDDINRNEIFIVEGDSAAGSAKQARNREIQAILP 656 
156095793  525 LLNTIYLKALQAKASDEEAKAARDLIRSKNNQCYATILPGKLVDCISDDINRNEIFIVEGDSAAGSAKQARNREIQAILP 604 
156087396  573 LLTAIYNKSIAAKRAFEVAKHAKELVRQKNANFLTTGLPAKLSDCTSNDIGLTELFIVEGESAAGNAKQARNRRFQAVLP 652 
84997852   545 LLLAIHNKSQAAKKAFDAARTAKDLIRQKSSSIVSN-ISGKLTECSSSKVENNELFIVEGESAAGNAKQARNRQFQAVLP 623 
71034009   542 LLLAIHNKSQAAKKAFDAARSAKDLIRQKSSSLISN-ISGKLTECSSNNVENNELFIVEGESAAGNAKQARNRQFQAVLP 620 
124806668  614 LLSSIYFKALQAKLSDEEAKAARDLIRSKNNQYSSTILPGKLVDCISDDISRNEIFIVEGDSAAGSAKQARNREIQAILP 693 
221061813  657 LKGKILNVEKIKNNKRIFENSELKSLITAIGLSIScdnskmakg-knmlnnkkKDIKKKYDL------------------ 717 
156095793  605 LKGKILNVEKIKNNKRIFENSELKSLITAIGLSVScenskiakg-kstinskkKDLKKKYDL------------------ 665 
156087396  653 LKGKILNIEKISSDLKVMENEEIKLLISSIGLAVN------------------PQTWRQDTLshvenmvptstrdalvat 714 
84997852   624 LKGKILNIEKITDNSKVLENQQIQLLMNSIGISIN------------------PVTWRQNDLte---------------- 669 
71034009   621 LKGKILNIEKITDNSKVLENQQIQLLMNSIGISIN------------------PVTWRQKDLia---------------- 666 
124806668  694 LKGKILNVEKIKNNKRIFENSELKSLITALGLNVNydnknlknnnilsnnkkgKNSKKKSDL------------------ 755 
221061813  718 ----------KCSKKENVQVNNAMVNKK-------KNTLFDTPLRYGKIIIMTDADVDGEHIRILLLTFLYRFQKNIIQN 780 
156095793  666 ----------RSGKKENAQVNNALVSKK-------KNPLFDTPLRYGKIIIMTDADVDGEHIRILLLTFLYRFQKNIIQN 728 
156087396  715 gpvgttvdttEASSSDSVDNNNVTATDNlgnipvdASSLAQLPLRYGKIILLTDADVDGAHLRILLLGLLFRICPQLYEH 794 
84997852   670 --------gtHMAMDRFIEMNSSKLTRK-------QIWLDLSKLRYGKIILLTDADVDGSHLKSLLLCLLYRLCPSLYLH 734 
71034009   667 --------gtDVALDPFIEMNNST---------------------YGKIILLTDADVDGSHLKSLLLCLLYRLCPSLYLH 717 
124806668  756 ----------KNSRFESTQNNNNILNKK-------KDILVDNTLRYGKVIIMTDADVDGEHIRILLLTFLYRFQKEIIEN 818 
221061813  781 GNVFVACPPLYKVTYNRffdntiketvMKQFNVSTRNSKTLIHTYSDDELNVLLGLLEKDRSSHAEQRSVElgkgglaRR 860 
156095793  729 GNVFVACPPLYKVTYNRffdatiketvMKQFNVSTKNSKTLIHTYSDDELNVLLGLLDKDRSSHAEHRSAQlgrgkptRG 808 
156087396  795 GRVYIACPPLYRITNMR----------KGNKARNGPNASAYTYAWSEEELPIAI-------------------------- 838 
84997852   735 GRVYVASPPLYRITNLR--------------------NKKYIYSWSQEHLLKTIKELNSKYSPKETTERVR-------EK 787 
71034009   718 GRVYVASPPLYRITNLR--------------------NKKYIYSWSQEHLLRTIKELNSKYEHKETTDGDE-------EK 770 
124806668  819 GNVYVACPPLYKITYNKffdnsikdivTKQFNVTTKQSKFIIHTYSDQELNNLLKLLDKDKIASEQKNMQN--------- 889 
221061813  861 GNIPSEDHLSSLTSLDNLNFRYNSADEVTEKERLNTDdrnAAHTANTAISTaplsGNAFFTFSKRYEIQRFKGLGEMMAD 940 
156095793  809 GNLPSDDRGSGLAGLADLNFGYNGADEVTKEGELSTDdssVANTENADPAA----NSAFFTFSKRYEIQRFKGLGEMMAD 884 
156087396  839 ----------------NKEMAPYNLDSVPSED--------IADTEQTPEIK--------PDSMRGITVQRFKGLGEMMAQ 886 
84997852   788 DNADDLGNEYEDEFNDDEDDREGNVEEIELKTELGSN---ITKDEKSDELDlyniNKSFSKNNKHLIIQRFKGLGEMMAN 864 
71034009   771 GDTQDQKPQYEDELEDNEDDREGNVEEIELKTELGSN---VTQDKQSDELDlyniNKTLSKTNKHLIIQRFKGLGEMMAN 847 
124806668  890 -------------KIKNKNMSSNGEPLSEYNEQSKTNdifVNEEGSTDSFId---DNVLFNFSKKYEIQRFKGLGEMMAD 953 
221061813  941 QLWSTTMDPSVRKLIRVTVNDAMRANNLIFSLMGEDSKLRKSFILENSPAPG 992 
156095793  885 QLWSTTMDPRVRKLIRVTVSDAMRANNLIFSLMGEDSKLRKSFILENSPAPG 936 
156087396  887 QLWDTTMNPDKRILRRISVQDGMRASKMLELLMGGDVQSRKEFIFTHADAFQ 938 
84997852   865 QLWETTMDPKKRILKRIVVSQEPEISEIIRLLMGSDVQSRKQYIFNNSGAFN 916 
71034009   848 QLWETTMDPKKRILKRIVVSHQPEISEIIKLLMGSDVQSRKQYIFNNSQAFH 899 
124806668  954 QLWNTTMDPTVRKLIRVTVNDAIRANDLIFSLMGEDSKLRKNFILENTNSLS 1005
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