Conserved Protein Domain Family
PRK14979

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PRK14979: PRK14979 
DNA-directed RNA polymerase subunit D; Provisional
Statistics
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PSSM-Id: 237878
Aligned: 12 rows
Threshold Bit Score: 329.884
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
150401521  16 LKFTIGgAPISFSSALRRIMVSSVPTYAIENVYFYENSSSMYDEILAHRLALIPITGKPVISDEVVRFSIMKEGPCTVYS 95 
159905734   1 MKMELK-APLSFSSALRRIMISEVPTYAIENVYFYENTSSMYDEVLAHRLGLIPIKGVPVSGDEVIVLTISKEGPCMVYS 79 
150399384  16 VKVELK-APLSFSSALRRLMISEVPTYAIENVYFYENTSSMYDEVLAHRLGLIPVKGVPVSGDEVVVFTLSKEGPCTVYS 94 
150402492   1 MKMELK-APLSFSSALRRIMISEVPTYAIENVYFYENTSSMYDEVLAHRLGLIPIKGVPVSGDEVIVLTISKEGPCMVYS 79 
134045316   1 MKMELK-APLSFSSALRRIMISEVPTYAIENVYFYENTSSMYDEVLAHRLGLVPIKGVPVSGDEVIVLTISKEGPCMVYS 79 
15668364   16 FIFSLK-APISFSNAIRRIMISEVPTFAIEDVYIYENSSSMDDEILAHRLGLIPIKGKPLLENEVITFTLEKEGPCTVYS 94 
45358885    1 MKMELK-APLSFSSALRRIMISEVPTYAIENVYFYENTSSMYDEVLAHRLGLIPIKGVPVSGDEVIVLTISKEGPCTVYS 79 
256810443  16 FIFSLK-APISFSNAIRRIMISEVPTYAIEDVYIFENSSSMDDEIIAHRLGLIPIKGKPLLENEIITFTLEKEGPCTVYS 94 
261403745  16 FIFSLK-APISFSNAIRRIMISEVPTFAIEDVYIYENSSSMDDEILAHRLGLIPIKGKPLLDTEIITFTLEKEGPCTVYS 94 
289191580  16 FIFSLK-APISFSNAIRRIMISEVPTYAIEDVYIYENSSSMDDEILAHRLGLIPIKGKPLIESEVITFTLEKEGPCTVYS 94 
297618745  12 ITMKVE-APLSFSSALRRIMISELPTYAIENVFFYENTSSMYDEVLAHRLGMVPIKGKPVSSDELITFVVSKEGPCTVYS 90 
296109380  16 FIFSLK-APISFSNAIRRIMISEVPTFAIEDVFIYENSSSMDDEILAHRLGLIPIKGKPAFENETILFTLEKEGPCVVYS 94 
150401521  96 ADLESESDSmVAFDNIPIVKLKEGQKLELECEALVGVGKNHAKWQPCNASYKLIKDNEVEFSVESHGQMDSEDILISAIE 175
159905734  80 SDIKSESGE-PAFENIPIVKLAEGQKLELETEALVGTGKIHAKWQPCNAVYKQISNDEVEFKIESFGNMDAEDIVRSSLE 158
150399384  95 SDLKSEAGE-IAFENIPIVKLAEGQKLEFEAEALVGTGKFHAKWQPCNVVYKQISNDEVEFTIESFGNMDAEDIIRSSLE 173
150402492  80 SDLKSESGE-PAFENIPIVKLAEGQKLELEAEALVGTGKIHAKWQPCNAVYKQISNDEVEFKIESFGNMDAEDIVRSSLE 158
134045316  80 SDIKSESGE-PAFENIPIVKLAEGQKLELEAEALVGTGKIHAKWQPCNAVYKQISNDEVEFKIESFGNMDAEDIIRSSLE 158
15668364   95 SDLKSENGE-VAFKNIPIVKLGKGQRIQIECEAIPGIGKVHAKWQPCNAVYKQIADDEVEFFVETFGQMEAEEILEEAVK 173
45358885   80 SDLKSESGE-PAFENIPIVKLAEDQKLELETEALVGTGKIHAKWQPCNASYKQISNDEVEFKIESFGNMDAEDIIRSSLE 158
256810443  95 SDLKSENGE-VAFKNIPIVKLGNGQKIQIECEAVPGIGKVHAKWQPCNAVYKQISEDEVEFFVETFGQMEAEEILEEAVK 173
261403745  95 SDLKSENGE-VAFKNIPIVKLGKGQRIKIECEAVPGIGKVHAKWQPCNAVYKQLSEDEVEFFVETFGQIDAEQILKEAVK 173
289191580  95 SDLKSENGE-VAFKNIPIVKLGRGQKIKIECEAVPGIGKTHAKWQPCNAVYKQVAEDEVEFFVETFGQMEAEEILEEAVK 173
297618745  91 SDLNSEVGE-SAFDNVPLVKLAEGQKLEAECEALVGTGKIHSKWQPCNVVYKELGDNLVEFKIESHKNMEAEDLIRSALE 169
296109380  95 SDLKSDNGE-VAFKNIPIVKLGEKQRIKIECEAVPGIGKVHAKWQPCNAVYKQLSEDEVEFLVESFGQMDSLEILEEATK 173
150401521 176 VLKNKAEKFLYELESYEINKAE 197
159905734 159 ILKNKAEKFLSELEGRELSDEN 180
150399384 174 ILKNKAEIFLSELEGHELNADN 195
150402492 159 ILKNKAEKFLSELEGRELSDEN 180
134045316 159 ILKNKAEKFLSELEGQELSDEN 180
15668364  174 ILKNKAESFLQQLEMIEQ---- 191
45358885  159 ILKNKAEKFLLELEGQELSDEN 180
256810443 174 ILKNKAESFLQQLELLEQ---- 191
261403745 174 ILRDKADSFLQQLETIEQ---- 191
289191580 174 ILKNKAESFLQQLELIEQ---- 191
297618745 170 ILKNKAETCLIELESHVFD--- 188
296109380 174 ILKNKAQEFLKQLEELEGEDGN 195
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