Conserved Protein Domain Family
PRK14715

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PRK14715: PRK14715 
DNA-directed DNA polymerase II large subunit
Statistics
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PSSM-Id: 237799
Aligned: 5 rows
Threshold Bit Score: 2887.99
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
57641838     2 SEEIYSPEMKAYFESLQREIDRAYAIARKARAQGKDPSFDVEVPQATDMAGRVESLVGPPGVAERIRELVKEYGKEIAAL 81  
212224793    1 MAELYSEKMKAYFESLQREIDRAYEIARKARAQGKDPSTDVEVPQATDMAGRVESLVGPPGVAERIRALVKEYGKELAAL 80  
261402975    2 IHVACSENMRKYFENIVKEVEKLYKIAEECRSRGFDPTDEVEIPLAVDMADRVEGLVGPKGVAKRIRELVKELGKEPASL 81  
289192128    2 VHVACSENMKKYFENIVNEVEKIYKIAEECRKKGFDPVDEVEIPLAADMADRVEGLVGPKGVAERIRELVKELGKEPAAL 81  
150401564    2 VHVKASKEMEFYFNNILENVKEIYNIAEKCRNKGYDVNNYVEIPLANDMADRVEGIVGPKNVSGRIRELVIELGKEPAAL 81  
57641838    82 KVVDEIIEGKFGDLgSKEKYAEQAVRTALAILTEGIVSAPLEGIADVKIKRNEwaDGSEYLALYYAGPIRSSGGTAQALS 161 
212224793   81 KVVDEIIDGKFGDLgSKEKYAEQAVRTALAILTEGIVSAPLEGIADVKIKRNEwaDGSEYLALYYAGPIRSSGGTAQALS 160 
261402975   82 EIAKEIVEGKFGNF-EKEKKAEQAVRTALAVLTEGIVAAPLEGIADVKIKKNP--DGTEYLAIYYAGPIRSAGGTAQALS 158 
289192128   82 EIAKEIVEGKFGNF-DKEKKAEQAVRTALAVLTEGIVAAPLEGIADVKIKKNP--DGTEYLAIYYAGPIRSAGGTAQALS 158 
150401564   82 EVAKEIVEGKFGTD-SPEVLAEQAVRTALAIITEGIVAAPLEGIAGVKIKTNK--DNSKYLAIYFAGPIRSAGGTAQALA 158 
57641838   162 VLVGDYVRRKLGLDRFKPSDEHIERMVEEVDLYHRAVTRLQYHPEADEVRLAMRNIPIEITGEETDKVEVS-HRNVPGVE 240 
212224793  161 VLVGDYVRKKLGLDRFKPSEKHIERMVEEIDLYHRAVTRLQYHPEADEVRLAMKNIPIEITGEETDKVEVS-HRDVPGVE 239 
261402975  159 VLVGDFVRKAMNLDKYKPTEDEIERYVEEVELYQSEVGSFQYSPTADEIRTAIRNIPIEITGEATDNVEVSgHRDLPRVE 238 
289192128  159 VLVGDFVRKAMGLDRYKPTEDEIERYVEEVELYQSEVGSFQYNPTADEIRTAIRNIPIEITGEATDDVEVSgHRDLPRVE 238 
150401564  159 VLVGDYVRKNMGLNKYIPSEDEIERYVEEVDLYQSEVGGFQYSPSPDEIRTAVKNISIEITGETTDDVEVSgHRDLDRVE 238 
57641838   241 TNHLRGGAILVLAEGVLQKAKKLVKYIDKMGIEGWDWIKEFVEAkekg-kssEENKDESKAEDTGTESVAEKkenVEKGF 319 
212224793  240 TNHLRGGAILVLAEGVLQKAKKLVKYIDKMGIEGWDWIKEFVEAkekgkaevKEEKVESAGEEAPTEKVEEK---IEKGF 316 
261402975  239 TNQIRGGALLVLVEGVLLKAPKILRHVDKLGIEGWDWLKDLK----------GKKDDNKSEEKVEDEEIDEEndeELEGY 308 
289192128  239 TNQLRGGALLVLVEGVLLKAPKILRHVDKLGIEGWDWLKDLMSK--------KEEKEEEKDEKVDEEEIDEEe-eEISGY 309 
150401564  239 TNCIRGGALLALVEGVLLKSPKILRHVDKLGMEGWDWLKQLKEK--------KKDEDEEKSDELKGEDENTEftdEELEE 310 
57641838   320 YYELYEKfrANIAPNKKYTKEIIGGRPLFAEPSTNGGFRLRYGRSRVSGFATWSVNPATMLILDEFIAIGTQMKTERPGK 399 
212224793  317 YYELYEKfrANIAPNKKYTKEIIGGRPLFAEPSTNGGFRLRYGRSRVSGFATWSVNPATMLILDEFIAIGTQMKTERPGK 396 
261402975  309 WRD------VNIEANKKFISEVIAGRPVFAHPSKVGGFRLRYGRSRNTGFATQGFHPALMYLVDEFMAVGTQLKTERPGK 382 
289192128  310 WRD------VKIEANKKFISEVIAGRPVFAHPSKVGGFRLRYGRSRNTGFATQGFHPALMYLVDEFMAVGTQLKTERPGK 383 
150401564  311 YHKIYDD--VEIEAVTKFIGDVIAGRPVFAHPSTNGGFRLRYGRSRNTGFATDGFHPALMYLVDEFMAIGTQLKTERPGK 388 
57641838   400 GCIVTPATTVEGPIVRLKNGSVVRVDDYETALKVRNEVDEILYVGDALVNFGDFVENNQTLLPANYVEEWWVQELVqaik 479 
212224793  397 GCIVTPATTVEGPIVKLKDGSVIRVDDYQTALKIRDKIEEILYVGDALVNFGDFVENNQTLLPANYAEEWWIQEFAkaia 476 
261402975  383 ATCVVPVDSIEPPIVRLKNGDVVRVETAEKAIELRNRVDEILFLGDVLVNYGDFLENNHPLLPSCWCEEWYEQLLK---- 458 
289192128  384 ATCVVPVDSIEPPIVKLKNGDVIRVDTIEKAIEVRDRVEEILFLGDVLVNYGDFLENNHPLLPSCWCEEWYEKLLI---- 459 
150401564  389 ATCVVPVDSIEPPIAKLKNGTVLKIDTIEKAIEYRKSVEEILFLGDILVNYGDFLENNHNLVPSSWCEEWYEKILI---- 464 
57641838   480 dlyevelqpfaendreaveeaAEYLEVDPDFLWNllkdplrvkPDVETAIHLSTVLDIPFHPYYTLYWNTLQPEEVEELQ 559 
212224793  477 diyevelkpfednpreaveeaAEYVELDPDFLERllkdplrvrPSIEEAIHISKVLDIPFHPHYTLYWNTLKPEEVEDLQ 556 
261402975  459 ---------------------SKNISYNEEFIGN---------PRPDEAVKFALETKTPLHPRFTYHWHDVSKEEIILLR 508 
289192128  460 ---------------------ANNIEYDKKFIKN---------PKPEEAVKFALKTETPLHPRFTYHWHDVSKEDIILLR 509 
150401564  465 ---------------------SKNIKYTDEFINN---------PTPKEATIYALNTNTPLHPKYTYYWHDVSKEDILQLR 514 
57641838   560 KALLGAQIEWAEFRKN--------------RFAKKVVLENDK--NIKRYLELLGLPHRLERVEKKRKVIVVE--YPWSAA 621 
212224793  557 KALLGAQIEWDEHMKN--------------KFARKVVLDNDS--KIKRYLELLGLPHRLERTEDRKKVIVIE--YPWSAA 618 
261402975  509 NWLLKGKEDNFEGKK---------------VWIVDLETEEDK--KAKRVLELIGCCHLV-----RNKKVVIEeyYPLLYS 566 
289192128  510 KWLLKGKEDNFEGKK---------------VWIVDLETEDDK--KAKRILELIGCCHLV-----RNKKVIIEeyYPLLYS 567 
150401564  515 NWLLTGKEEIIDNNNNnnnnnnnnfdainsSWKIQYNNKDENniKSKRILELIGCPHDVIYSENKEQYIIIDeyYPLLYS 594 
57641838   622 LLTPLGNL-------EWEFKAKPFYTVIDIINENNRIKLRDRGISWIGARMGRPEKAKERKMKPPVQVLFPIGLAGGQSR 694 
212224793  619 LLTPLGNL-------EWEFKAKPFHTVIDIINKGNRIKLRDRGISWIGARMGRPEKAKERKMKPPVQVLFPIGLAGGSSR 691 
261402975  567 LGFDVENKkdl--veNIEETANSAKNSIHFVNLLSPFEVRRNTYVYVGARMGRPEKAAPRKMKPPVNGLFPIGNAGGQVR 644 
289192128  568 LGFDVENKkdl--vdNIDEILKTAKNSMHLINLLAPFEVRRNTYVYVGARMGRPEKAAPRKMKPPVNGLFPIGNAGGQVR 645 
150401564  595 LGYDIENNkdllenqNLEEKCQKSKNPIHFINLLSQFEIKRKAYIYIGARMGRPEKAAPRKMKPPVNSLFPIGNAGGVVR 674 
57641838   695 DIKKAAEEGKTARVEIAFFKCPKCGHVGPEHLCPVCGTRkellwhcpkcgadypesdakdfnyrcpkcdVELKPYAEREI 774 
212224793  692 DIKKAAEEGKTTEVEIAFFKCPKCGHVGPEHICPSCGTRkellwhcpkcstdylegeadnfdfrcpkcgIELKPYARRRI 771 
261402975  645 LINKAVEENNTDDIDVSYAVCPKCEKISLYRVCPFCGTK------------------------------VELNKFGKIKA 694 
289192128  646 LINKAVEENNTDDIDVSYTRCPNCGKISLYRVCPFCGTK------------------------------VELDKFGRIKA 695 
150401564  675 LINKAVETNTTDNIELYSGICPNCGKLGLYNKCLFCGAP------------------------------VKLSGPTTVEL 724 
57641838   775 KPADLLRQAMDNVKVYGIDRLKGVKGMTSGYKMAEPLEKGLLRVKNDVYVFKDGTIRFDATDAPITHFKPKEIGTSVEKL 854 
212224793  772 KPSELLRAAMENVKVYGIDKLKGVQGMTSGYKMAEPLEKGLLRAKNDVYVFKDGTIRFDATDAPITHFKPREIGVSVEKL 851 
261402975  695 PLKDYWYNALKRLGINKPGDVKCIKGMTSKQKIVEPLEKAILRAMNEVYVFKDGTTRFDCTDVPITHFKPSEINVSVEKL 774 
289192128  696 PLKDYWYAALKRLGINKPGDVKCIKGMTSKQKIVEPLEKAILRAMNEVYVFKDGTTRFDCTDVPVTHFKPNEINVTVEKL 775 
150401564  725 PIKDYWYKSLENLKINKPGNVKCIKGMTSKDKIVEPLEKGILRAVNDVFVFKDGTLRYDCTDVPLTHFKPSEINISIEKL 804 
57641838   855 RELGYTHDFEGKPLERDDQILELKVQDVILPYEAGRYLLKVARFIDDLLEKFYGLPRFYNAEKMEDLVGHLVIGLAPHTS 934 
212224793  852 RELGYTHDFEGKPLERDDQIVELKVQDVILSYEAGRYLLKVARFIDDLLEKFYGLPRFYNAEKMEDLIGHLVIGLAPHTS 931 
261402975  775 KELGYEKDIHGRELVDEDQVLELKPQDVIIPENCAEYFVKVANFIDELLEKLYKMDRFYNVKEKKDLIGHLVIGMAPHTS 854 
289192128  776 RELGYDKDIYGNELVDGEQVVELKPQDVIIPESCAEYFVRVANFIDDLLEKFYKVERFYNVKKKEDLIGHLVIGMAPHTS 855 
150401564  805 KELGYDKDIRGAPIEHPDQIIELKIQDVIIPNNCAEYFIRATKFIDDLLEKFYKKDRFYNVKEKDDLIGHLVIGMAPHTS 884 
57641838   935 AGIIGRIIGFSDVLVGYAHPYYHAAKRRNCFPGDTRILVQINGLPQRITLRELYDLFED--ERYENMAYVRKKP--KADV 1010
212224793  932 AGIIGRIIGFSDVLVGYAHPYYHAAKRRNCFPGDTRILVQIDGMPMRITLRELYELFED--EHYENMVYVRRKP--KVDV 1007
261402975  855 AGMVGRIIGYTEARVGYAHPYFHAAKRRNCFPGDTRILVNIDGNVERITLKELYELFDEkyEVFENDAFVRKKPlnNKNI 934 
289192128  856 AGMVGRIIGYTKANVGYAHPYFHAAKRRNCFPGDTRILVNIDGNVERITLKELYELFDEkdEVFEKDAFIRKKP--KRDI 933 
150401564  885 AGMVGRIIGYCNAYVGYAHPYFHASKRRNCFPPNTTILVNINGEVKRITIEELYNLYDN--EYYKNMAYIKKDIknNNNI 962 
57641838  1011 KVYSFDPESGKVVLTDIEDVIKAPSTDHLIRFELELGRSFETTVDHPVLVYE--NGKFVEKRAFEVREGDRILVPNLKLP 1088
212224793 1008 KVYSFDPESGKVVLTDIEDVIKAPSTDHTIRFELELGRAFETTVDHPVLVYE--NGKFIEKRAFEVKEGDRILVPKLELP 1085
261402975  935 KVYSFNPEHKNVVLTDIEEVIKLESPNHQIKITLDGNREFITTHDHSVMVYE--NGKFIKKLAMDVKEGDLMLIPKVDFE 1012
289192128  934 KVYSFDVENKKVVLTDIEEVIKLQSPNHLIKITIDGNREFITTHDHPVMVYE--NGKFIKKLAMDVKEGDLMLIPKIEFE 1011
150401564  963 KVYSFDTLNKKMVLTDIEEVLKIQSPNHLVNIGLDTGRSFETTPDHPVMVYDekEDKFIKKNAMDVEENDLMLIPKLDFE 1042
57641838  1089 E------KNIDYLDLLKEFSREEFAHLHDRIMVRGIAEWLR-SVEADVKED---------------YLRRDSIPLSVLLR 1146
212224793 1086 E------ADVESIDLLEEFSREEFKELWDRIMVRGLSGWFM-SIGAGVKED---------------YLRRDSMPLDVLLN 1143
261402975 1013 E------DNIEEFDLLKEFSKEEFKDLWSILRVIGISNWIKeNIGKELIRElkl----------deYLKYDTIPLDKLLI 1076
289192128 1012 E------DDIEEFDLLKEFSKEEFKDLWSILRVRGISNWIKeNIDKTLVRElkl----------ndYLRYDTIPLDKLLI 1075
150401564 1043 EdeeqeqDNIEHIDLLAELSKEEYKNMWELLRIRGISDWIKnNIQKHCLKEknengkenlikniakYIKQDTIPLNLLLK 1122
57641838  1147 VLTEKEISIEEVP-SCWLGFKRDKVRIKRFVPLKPLLRVVGYYLAEGYARESKSVYQLSFSMAEKEVREDLKRALREAFG 1225
212224793 1144 VLKEKGLSIKDVP-DCYLGFKRDKVRIKRFVPVGPFLRVLGYYLAEGYARKSNSVYQIGFSIADEEAREDLKKALREAFG 1222
261402975 1077 LLEKSNLTIDEVPkNCYIAVKDDKTNINRIIKIEPLLKLIGYYLSEGYARESKTVYQINFSNSEEEIRENIKKSIKEAFG 1156
289192128 1076 LLEKSNLTVDDVPkDCYIAVRRDKVNIKRIIKIEPLLKLIGYYLSEGYARESESVYQLSFSAHEEELRENIKKAIREAFG 1155
150401564 1123 ILKNAELNITDVPkDAFIAVRRDKVNIRRIIKIEPLLKIIGYYLAEGYMRKTSSVYQINFSNYDEEVIKDIKNSLNEAFG 1202
57641838  1226 DGFGIYE--RGGKVTVGSRILYLLFTEVLKAGKNAYSKRVPSLVFTLPREAVAEMLKAYFEGDGSALKSVPRVVAYSVNK 1303
212224793 1223 EGFGIHE--RGEKVTVGSRILYLLFTEVLKAGRNAHTKRVPAFVFKLTPELVAEMLRAYFEGDGSALKTVPRVVVYSVNK 1300
261402975 1157 -GINVYEskEEGKLSLSSRVVYLFFTRVLKIGKNAKSKRIPSFIFKLPKEKVKLMLSAYFDVEGSISNTKPRISVYSINK 1235
289192128 1156 -DVNIYEnkEEGKLTLSSRVVYLFFTRVLKIGKKAKSKRVPSFVFKLPKEKVKLMLSAYFDGDGTALTTKPRVAVYSANK 1234
150401564 1203 DGFGIYE--KDGKITVGSRIIYLLFTEILKTGINAHNKRVPSFIFKLPKEKVKLMLSAYFTGDGSAVKTRPIVVIYSANK 1280
57641838  1304 ALLEDIETLLLAKFGIRGYYTFDNNAN-RGNARGRLYHVERGTEAPVSKVYALNIAGEHYHRFFNSIGFVSERKNSIYEL 1382
212224793 1301 VLLEDIETLLLAKFGIRGYYTLDKNAN-RGNARGRLYHVERGGEPPVSKVYALNIAGEYYDRFFEKIGFVSDRKNSVYSL 1379
261402975 1236 TLLEDID-LLLNRFGIKTYWIDDKNVE------------GGGKENPKLAVYALNISGYYCDIFFKEIGFFLKRKQMIYEL 1302
289192128 1235 KLLEDID-LLLNRFGIKTYWTVDENANeRDGSCVKKYYEERGKEAPKSVVYALNIAGHYYDIFFKEIGFFLERKQKVYEL 1313
150401564 1281 KLLEDIDTLMISKFGLYGNWGADKNANgRKGNVVMKYHEKRETEIPKSTVYRIDYNGIQAMKYFENIGFTSSKKQNIYEL 1360
57641838  1383 HAEKSPAQDRYSSQNGWLVKVRRIEYITPKDDFVFSLNAKKYHNVIINESIVTHQCDGDEDAVMLLLDALLNFSKYYLPE 1462
212224793 1380 HSDKKRHHDKYLSENGWLVKVRRVEYVRPREEFVFSLNAKDYHNVLINENLVTHQCDGDEDAVMLLLDALLNFSKYYLPE 1459
261402975 1303 HKNKVRKNDSTEHNFGWIVKVKKVEIIKSNDEFIYTLNAKKYHNVIINENIQTFQCDGDEDSFFLLLDAFLNFSKKFLPD 1382
289192128 1314 HKNRVKRIDESDWEEGWYCKVRKVEIIKSEDEFIYSLNAKNHHNVIINENIQTYQCDGDEDSFFLLLDAFLNFSKKFLPD 1393
150401564 1361 HTHKNFKAKKGLKEYGYIVKVRNKSIIKAEDEFVYSLNAKKYHNVVINSNIQMHNCDGDEDGIFLLLDAFLNFSKRFLPD 1440
57641838  1463 KRGGKMDAPLVVTTRLDPREVDSEVHNMDVVRYYPLEFYKATYELKSPKEVK-VIERVEDRLGKPEMYEGIKFTHDTDDI 1541
212224793 1460 KRGGKMDAPLVVTTRLDPREVDSEVHNMDVVRYYPLEFYAATYEMKSPKEIK-FIERVEDRLGKPEMYEGIKFTHDTDDI 1538
261402975 1383 KRGGQMDAPLVLTTILDPKEVDGEVHNMDTMWSYPLEFYEKTLEMPSPKDVKdIMETVEDRLGKPEQYEGIGYTHETSRV 1462
289192128 1394 KRGGQMDAPLVLTTILDPKEVDGEVHNMDTMWSYPLEFYEKTLEMPSPKEVKeFMETVEDRLGKPEQYEGIGYTHETSRI 1473
150401564 1441 KRGGQMDAPLVLTTLLDPKEVDGEVHNLDTMWEYPLEFYEKTLEMPTPKDIKeLIETVEDRLDKPSQYEKLGYTHETTDI 1520
57641838  1542 GLGPKMSLYKQLGDMEEKVARQLALAERIRAVDEHHVAETIINSHLVPDLRGNLRSFTRQEFRCvKCNTKYRRPPLTGKC 1621
212224793 1539 GLGPKMSLYKQLGDMEEKVARQLALAERIRAVDEHHVAETIINSHLVPDLRGNLRSFTRQEFRCvKCNTKYRRPPLTGKC 1618
261402975 1463 DLGPKVCAYKTLGSMLEKTASQLLVAKKIRATDEKDVAEKVIQSHFIPDLIGNLRAFSRQSVRC-KCGAKFRRVPLRGKC 1541
289192128 1474 DLGPKICAYKTLGSMLEKTTSQLSVAKKIRATDERDVAEKVIQSHFIPDLIGNLRAFSRQAVRC-KCGAKYRRIPLKGVC 1552
150401564 1521 SNGPLICAYKTLGSMLEKTDAQLTVARKIRATYERDVAEKVIQSHFVPDLIGNLRAFSRQGFRC-KCGAKYRRVPLKGVC 1599
57641838  1622 PKCGGKIVLTVSKGAIEKYLPTAKMLVTKYRVKDYTRQRICITEKDIKTLFENvfpekqrtlmgfsadicekmvkertgh 1701
212224793 1619 PKCGGKIVLTVSKGAIEKYLPTAKMLVTRYNVLDYTRQRICMTEKDIKSLFENvfperqrtlmgfsadicekmikartgk 1698
261402975 1542 PKCGSKLILTVSKGAVEKYMDVAEKMAEQYDVNNYIKQRLKIIREGINSIFEN--------------------------- 1594
289192128 1553 PKCGSKLILTVSKGAVEKYMDVAEKMAEEYDVNDYIKQRLKIIKDGINSIFEN--------------------------- 1605
150401564 1600 RKCGSKLILTVSKGAVEKYMGVSQTMAEKYNASDYVKQRLELIKEGIDNLFQS--------------------------- 1652
57641838  1702 sngkngyldefngkngkaskksgslasklsgkgkepskkkesakpkrsekvknltsfeaaakneqargtagnakkaesek 1781
212224793 1699 sngrngyldelkangk------------------------lkkkaekskaetkaekkskkaekktkpseglendirkeks 1754
261402975      --------------------------------------------------------------------------------     
289192128      --------------------------------------------------------------------------------     
150401564      --------------------------------------------------------------------------------     
57641838  1782 pkrKKRKGISLDEFFGS 1798
212224793 1755 kmkKPKKGISLDEFFGS 1771
261402975 1595 ---DKSKQVKLSDFFKI 1608
289192128 1606 ---EKSRQVKLSDFFKI 1619
150401564 1653 ---DKRKQVKIEDFFK- 1665
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