Conserved Protein Domain Family
PRK14091

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PRK14091: PRK14091 
RNA chaperone Hfq
Statistics
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PSSM-Id: 237607
Aligned: 7 rows
Threshold Bit Score: 304.43
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
103486758  31 VSDKNQNLQDIFLNALRKSKTPVTMFLVKGVKLQGIITWFDNFSLLLRRDGQSQLVYKHAISTVMPSHDFDLSLLGgNLR 110
148553178   1 MADKVNNLQDIFLNSVRKTKTPVTMFLVKGVKLQGIITWFDNFSVLLRRDGQSQLIYKHAISTVMPAHPLDMAEID-KSF 79 
56551243    1 MAEKVNNLQDFFLNTLRKTRTPVTMFLVKGVKLQGVITWFDNFSILLRRDGQSQLVYKHAISTIIPAHPLEQLRES-RSL 79 
85374079   16 KGGKQPNLQDAFLNMLRRNKTPVTVFLVKGVKLQGIVTWFDNFSMLLRRDGQSQLVYKHAISTIMPGQPIDASQF--ASQ 93 
87199948   32 SGGKGQNLQDLFLNHLRKNKIPVTMFLVKGVKLQGIVTWFDNFSILLRRDGQSQLVYKHAISTIMPGQQLSVAHFQ-TSG 110
260753128   1 MAEKVNNLQDFFLNTLRKTRTPVTMFLVKGVKLQGVITWFDNFSILLRRDGQSQLVYKHAISTIIPAHPLEQLRES-RSL 79 
294011656   5 MAEKVNNLQDIFLNSLRKSKTPVTMFLVKGVKLQGIITWFDNFSVLLRRDGQSQLVYKHAISTVMPAQSMDLTDLR-KAS 83 
103486758 111 DapASKGKALQDVFLNAVRRSDESVTMFLVNGVMLQGDIVAFDLFCMLLERERQVQLVYKHAISTVQPNGPINLTDNGDD 190
148553178  80 E--DKKSHLLQEVFLSAVRKAREPVTMFLVNGVMLQGEIAAYDLFCMLLRRDGLSQLVYKHAISTVQPAHPINLAEIDST 157
56551243   80 Ma-ERKSSLLQDVFLSAIMQQQEPVTMFLINGVMLQGEIAAFDLFCVLLTRNDDAQLVYKHAVSTVQPVKSVDLTMTERR 158
85374079   94 Dg-NKKQRLLQDVFLSRVRDAGVQVTMFLINGVMLQGRIGAYDLFCVLLERDGYVQLAYKHAVSTVQPASAVDLTDWEED 172
87199948  111 EenGKKARLLQEVFLSSVRDSGVQVTMFLVNGVMLQGKVASYDLFCMLLEREGYVQLAYKHAVSTIQPAGHVDLTGDWDG 190
260753128  80 Ma-ERKSSLLQDVFLSAIMQQQEPVTMFLINGVMLQGEIAAFDLFCVLLTRNDDAQLVYKHAVSTVQPVKSVDLTMTERR 158
294011656  84 Dg-NGKSKLLQEIFLSAVRKSGSPVTMFLVNGVMLQGEIAAFDLFCMLLERDGMIQLVYKHAISTVQPLHALDLTGEGEG 162
103486758 191 EAA 193
148553178 158 DDD 160
56551243  159 DED 161
85374079  173 EED 175
87199948  191 EDS 193
260753128 159 DED 161
294011656 163 ED- 164
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