Conserved Protein Domain Family
PRK12608

?
PRK12608: PRK12608 
transcription termination factor Rho; Provisional
Statistics
?
PSSM-Id: 237150
Aligned: 18 rows
Threshold Bit Score: 525.035
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
57239494   33 VGVKVLDLSELKKKSIEDLLkiaeelgvvsngrmlkqeiifhlmkkvvndggaaiggGVVEILSD-GFGFLRSPEANYAA 111
58579473   33 VGVKVLDLSELKKKSIEDLLkiaeelgvvsngrmlkqeiifhlmkkvvndggaaiggGVVEILSD-GFGFLRSPEANYAA 111
58617527   33 GEVKVLDLSELKKKSIEDLLkiaeelgvvsngrmlkqeiifhlmkkvvndggaaiggGVVEILSD-GFGFLRSPEANYAA 111
71281530      --------------------------------------------------------------------------------    
83816381    1 ----------MSENDNESFR-------------------------------------RLLELIGEkKYGFMRELRPDLPK 33 
153004052   1 --------------MTEEVE-------------------------------------GVLQFEGK-GNGYLRDPKRSYLP 28 
152995912   1 MTRKILSLKGKRSSDATPVDev---------------------------------------------------------- 22 
197121608  16 TAPQGQPAPAAQAEATEEVE-------------------------------------GVLQFEGK-GNGWLRDAKRSYLP 57 
220916372  16 TAPQGQPAPAAQAEATEEVE-------------------------------------GVLQFEGK-GNGWLRDAKRSYLP 57 
268318026   1 -------------MSEQTFR-------------------------------------GMLELIGDkKFGFVREFRPDLPK 30 
57239494  112 SSDDVYISAGQIKKFNLRTGDIVSGEIRApseKERYFTLVKAHSINFTDMGKLQRYVHFDDLIPLYPEERILLECndpis 191
58579473  112 SSDDVYISAGQIKKFNLRTGDIVSGEIRApseKERYFTLVKAHSINFTDMGKLQRYVHFDDLIPLYPEERILLECndpis 191
58617527  112 SSDDVYISAGQIKKFNLRTGDIVSGEIRApseKERYFTLVKAHSINFTDMGKLQRYVHFDDLIPLYPEERILLECndpis 191
71281530    1 -------MTRKILKLNVKRKIVSKPIDEV------------VKDVSHDDPQK-----RFLNGVAINPEQCIHLEL----- 51 
83816381   34 DEDDPFMPPPLIGKFNLRDGVVIEGDLKPg--RKGGMQVGWIDSVMGLPPEEWAQLKDFDQGASVYPDEKLDLIT----- 106
153004052  29 QPFDVEVPRWLIDRMHLQAGLLVKGQATA---RNMKRVLARVDQLEGTDPMAVARRTHFHNLTATDPTERLVMET----- 100
152995912  23 -----------------------------------------vEDLYPNDPEK-----RFLNGVAIHPSPCIHLAS----- 51 
197121608  58 QPFDVEVPRWLIDRTHLQPGMLVKGLATV---RNMKRVLSRIDTLEGTDPMAVVRRTHFQNLTATDPTERLVMET----- 129
220916372  58 QPFDVEVPRWLIDRTHLQPGMLVKGLATV---RNMKRVLSRIDTLEGTDPMAVVRRTHFQNLTATDPTERLVMET----- 129
268318026  31 GKNDPFVPPPVIRRYNLRDGVLIEGTLRPg--RKGDMQVDEIHSIMGVSPEEWAKTEDFESGQIVYPDEKFNLVT----- 103
57239494  192 lSKKDISMRVIDIVAPLGKGQRALIVAPPRAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSST 271
58579473  192 lSKKDISMRVIDIVAPLGKGQRALIVAPPRAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSST 271
58617527  192 lSKKDISMRVIDIVAPLGKGQRALIVAPPRAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSST 271
71281530   52 -GSQQHSARAMDLFTPIGMGQRGLIVAPPGSGKTTILKHTCQAVGAAYPDIKLYALLIDERPEEVTDFKRSVPAQVYASS 130
83816381  107 -GTDDESMRVLDLVAPLGKGQRALIVSPPRAGKTVLLKDIAAGVTENHPEVELVSLLVDERPEEVTDFRRTTEAQVFASS 185
153004052 101 -RADEMIGRVLDLVSPIGLGARGLITSPPKAGKTIMLQRIAQAITANRPDVHLTVLLVDERPEEVTDMKRNIKGEVVGSS 179
152995912  52 -GSSQRTVRAMDLITPIGMGQRGLIVAPPGSGKTTMLKHICQAVAEAYPEIKLYALLIDERPEEVTDFKRSVSAEVHASS 130
197121608 130 -RSDELIGRVLDLISPIGLGARGLITSPPKAGKTIMLQRIAQAIIANRPDVHLTVLLVDERPEEVTDMKRNIKGEVIGSS 208
220916372 130 -RSDELIGRVLDLISPIGLGARGLITSPPKAGKTIMLQRIAQAIIANRPDVHLTVLLVDERPEEVTDMKRNIKGEVIGSS 208
268318026 104 -GPTDYAMRVVDLAAPIGKGQRALIVAPPRAGKTVLLKQIAAGIAKNHPEVKLVALLVDERPEEVTDFRRSTPAIVFASS 182
57239494  272 FDEPGYRHVQLAEIVIEKAKRMVEHRKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQRPKRFFGAARNIENGG 351
58579473  272 FDEPGYRHVQLAEIVIEKAKRMVEHRKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQRPKRFFGAARNIENGG 351
58617527  272 FDEPGYRHVQLAEIVIEKAKRMVEHRKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQRPKRFFGAARNIENGG 351
71281530  131 TDENYDHHVRVANDLLNIARKEAGEGHDVMIVIDSLTRLTRVYNANQKSSGRTMSGGIDARAMEIPRKLFGTARNIENGG 210
83816381  186 NDRGEDNHVRVSTLAMEHAKRLVETGKDVVVLLDSLTRLGRTFNLWVDGSGRTLSGGLDAEALKVPRQIFGSARNIEGGG 265
153004052 180 NDRPTEEHIHVAEMVLERAKRLVEGGKDVVILLDSITRLSRAYNKEVESSGRTLTGGVDSRALERPKRLFGSARKAEEGG 259
152995912 131 SDESYTQHVRVADALLATARKQAGEGQDVMIVIDSLTRLARVHNAEQRGSGRTMSGGLDTRALEIPRKLFGAARKIENGG 210
197121608 209 NDRPTEEHIHVAEMVLERSKRLVEGGRDVVVLLDSITRLSRAYNKEVESSGRTLTGGVDSRALERPKRLFGSARKAEEGG 288
220916372 209 NDRPTEEHIHVAEMVLERSKRLVEGGRDVVVLLDSITRLSRAYNKEVESSGRTLTGGVDSRALERPKRLFGSARKAEEGG 288
268318026 183 NDREEDNHIRVSTLALEFAKRLVELKHDVVLLLDSLTRLGRTFNLYVESSGRTLSGGLDARALQIPRRIFGAARNIEGGG 262
57239494  352 SLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYPAIDISKSGTRKEDMLIDHVCLKKVWLLRRLLSSMG 431
58579473  352 SLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYPAIDISKSGTRKEDMLIDHVCLKKVWLLRRLLSSMG 431
58617527  352 SLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYPAIDISKSGTRKEDMLIDHVCLKKVWLLRRLLSSMG 431
71281530  211 SITILATILVDTGSRMDQVIFEEFKGTGNMEIVLSREAANMRVFPALDIAKSSTRREELLLNSKDIEKVRFLRRALTSLK 290
83816381  266 SLTIIATALVDTGSRMDEVIFEEFKGTGNSEIVLDREMADKRIFPAVNLRESGTRNEERLLGEVRRKKHNQLFRALNSRA 345
153004052 260 SLTIIATALIDTGSRMDEVIFEEFKGTGNMEVVLSRQLAERRIFPAIDIGASGTRKEEKLFSPKEIEKVRRLRGALASLK 339
152995912 211 SLTILATILVDTGSKMDQVIFEEFKGTGNMEIVLSREAASHRVFPAIDIAKSSTRREELLIDGKDLEKVRALRRSLTNLK 290
197121608 289 SLTIIATALIDTGSRMDEVIFEEFKGTGNMEVVLSRQLAERRIFPAIDIGASGTRKEEKLFSSKDIEKVRRLRGALASLK 368
220916372 289 SLTIIATALIDTGSRMDEVIFEEFKGTGNMEVVLSRQLAERRIFPAIDIGASGTRKEEKLFSSKDIEKVRRLRGALASLK 368
268318026 263 SLTIIATALIETGSRMDEVIFEEFKGTGNAEIVLDREMADKRIFPAINLRKSGTRNEERLIGDR-IEQYHRLFRALNSRP 341
57239494  432 SVEAMEFLRDKLSITKDNNEFFDMMNS 458
58579473  432 SVEAMEFLRDKLSITKDNNEFFDMMNS 458
58617527  432 SVEAMEFLRDKLSITKDNNEFFDMMNS 458
71281530  291 PVEGARKLVELLEKYPTNAELLNR--- 314
83816381  346 PIEAMQALLRHLRNSPSNAHLLNELVP 372
153004052 340 PVEAMERLLKKLSEFETNDEFLQSF-- 364
152995912 291 PVDGAHKLVELLEEFPTNAELLKAFSP 317
197121608 369 PVEAMERLLKKLSEFDSNDEFLQSF-- 393
220916372 369 PVEAMERLLKKLSEFDSNDEFLQSF-- 393
268318026 342 PIEAMQALLRHMQQTQSNEELLNSLVP 368
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap