Conserved Protein Domain Family
PRK12542

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PRK12542: PRK12542 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 183581
Aligned: 17 rows
Threshold Bit Score: 277.704
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
30260800    1 MKVTDNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHNLNIQEFKRYILRVAKNKAIDSYRK 80 
229603531   1 MKVTDNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHNLNIQEFKRYILRVAKNKAIDSYRK 80 
42779792    1 MKVTNNDYEKMEELYELYEQKIYYVAYSILNNIQQAEDAVQETFITLYKNLAKLYSLSTEELKRYILRVAKNKAIDSYRK 80 
30018830    1 MKVTNKDYEKMEELYELYEQKIYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLSTEELKRYILRVAKNKAIDSYRK 80 
52144667    1 MKVTDNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLATEELKRYILRVAKNKAIDSYRK 80 
222094400   1 MKVTNNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLSTEELKRYILRIAKNKAIDSYRK 80 
218895700   1 MKVTNNDYEKMEELYELYEQKIYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLSTEELKRYILRIAKNKAIDSYRK 80 
218232155   1 MKVTNNDYEKMEELYELYEQKIYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLATQELKRYILRVAKNKAIDSYRK 80 
217958232   1 MKVTNNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDSVQETFITLYKNLEKLHSLSTEELKRYILRVAKNKAIDSYRK 80 
218901842   1 MKVTNNDYEKMEELYELYEQKVYYVAYSILNNIQQAEDAVQETFITLYKNLEKLHSLATQELKRYILRVAKNKAIDSYRK 80 
30260800   81 NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLKELNESNRQVFKYKVFYNLTYQEISSVMGIKEANVRKQFE 160
229603531  81 NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLKELNESNRQVFKYKVFYNLTYQEISSVMGIKEANVRKQFE 160
42779792   81 NKRHETFLEEYERESVEAVDENIEEWEKRKMSEVQIDALLKELNESNRQVFKYKVFYNLTYQEISSVMGITEVNVRKQFE 160
30018830   81 NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE 160
52144667   81 NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLKELNESNRHVFKYKVFYNLTYQEISSVMGITEANVRKQFE 160
222094400  81 NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDALLKELNESNRQVFKYKVFYNLTYQEISSVMGITEVNVRKQFE 160
218895700  81 NKRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE 160
218232155  81 NKRHETFLEEYERESTEAVDENIEEWEKRVMSEVQIDALLKELNESNRQVFKYKVFYNLTYQEISSVMGINEANVRKQFE 160
217958232  81 NRRHETFLEEYERESIEAVDENIEEWEKRKMSEVQIDTLLTELSESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE 160
218901842  81 NKRHETFLEEYERESIEAVDENVEEWEKRVMSEVQIDALLKELNESNRQVFKYKVFYNLTYQEISSVMGITEANVRKQFE 160
30260800  161 RARKRVQNMIGGIQHDEFKELQRNI 185
229603531 161 RARKRVQNMIGGIQHDEFKELQRNI 185
42779792  161 RARKRVQTIIGGIQHDEFKELQRNI 185
30018830  161 RARKRVQNMIGGIQHDEFKELQRNI 185
52144667  161 RARKRVQNMIGGIQHDEFKELQRNI 185
222094400 161 RARKRVQNMIGGIQHDEFKEFQRNI 185
218895700 161 RARKRVQNMIGGIQHDEFKELQRNI 185
218232155 161 RARKRVQNMIGGIKHDEFKELQRNI 185
217958232 161 RARKRVQNMIGGIQHDEFKELQRNV 185
218901842 161 RARKRVQNMIGGIQHDEFKELQRNI 185
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