Conserved Protein Domain Family
PRK12536

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PRK12536: PRK12536 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 237131
Aligned: 22 rows
Threshold Bit Score: 271.154
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
238028043   4 AEDRLKTLFVSGLDGDAKAYHGFLQELTRHLRGYLRKRIPQLHDDVEDLVQEILLAVHHARHTYRTDEPLTAWVHAIARY 83 
91783635   13 KEAHLRALFLSGLDGDSAAYRQFLAELGAHLRGFLRRRLHDGASDAEDLMQEILLAVHNARHTYRSQEPLTAWIHAIARY 92 
71908204   13 REDRLKDLLVRSLAGDNAAYQVFLTELSAHLRAFLRRRLVRLPDEIEDLVQESLLAVHNQRHTYDSAQPLSAWVQAIARY 92 
71907152   13 KEDRLKTLLMRGLAGENAAYQVFLTELSAHLRAFLRRRLIQLPDEVEDLVQEALLAVHNQRHTYEPGQPLSAWVQAIARY 92 
152981873  25 SELRLHALLVQGLAGDQVAYRNFLQLTATHLRAFLRRRLSRWPDEVEDLVQESLLAIHNQRATYDVNAPLTAWVYAIAKY 104
187919831   4 AEQRLKTLLVAGLAGNASDYRLFLSELTRHLRGYLRKRIPQLHDDVEDLVQEILLAVHNARHTYRPDEPLTAWVHAIARY 83 
187919842  13 VEERLKALFVRGLDGNAAAYQAFLSDLTGHLRGFLRKRLFYLQDDVEDLVQEILLAVHNGRHTYRPDQPLTAWVHAIARY 92 
238025167  13 TEQALRQWLLAGLDGDEAAYRRFLSALCAYLRGFVRRRLANRPADVEDLVQEMLLAIHDKRHTYRAGEPLTAWVHAIARY 92 
239815647  10 AEAALRSLFLRGLDGDAAAYREFLQKLSAHLRAFLGKRLFGWPDEVEDLVQECLLAMHNQRHTYQSDQPLTAWVHAIARY 89 
291481536  46 VEQRLRALLLAGLGGDQAAYHAFLTELTGRLRAFVRRRLYQLQDEVEDIVQETLLAVHNARHTYRAEEPLTAWVYAIARY 125
238028043  84 KLMDLFRSRFRRQALDVPFDDDHEaLFTAPDDEPA-QARRDIGKLLAHLPDKQRLPILHVKLQGLSVTETAALTGLSESA 162
91783635   93 KLTDYFRARARHDALNDPLDDAFE-LLAAPDLEPA-QAKRDVGKLLEQLPDRQRLPIVHVKLEGLSVTETAKLTGLSESA 170
71908204   93 KLVDLLRRRAAYDLLNDPLDEEME-LFTTADSDAA-EARRDLNKLLADLPDQLRLPIVHTKLEGLSVKEAADLIGMSESA 170
71907152   93 KLVDLLRRRAVHETLNDPLDEAME-VFSSSDTEAA-EARRDLNKLLADLPEQQRLPIVHTKLEGLSVKETADLTGMSESA 170
152981873 105 KLIDWLRRHARRETLNDPLDDENE-LFTTADSDAH-EAQRDLGKLLELLPEQQRAAIVHTKLDGWSVRETAAALNISEAS 182
187919831  84 KLMDFFRTRARRESLHEPLDEHDD-IFAECDDEPA-DARRDVGKLLGHLPDKQRLSILHVKLQGLSVAEAAQLTGLSESA 161
187919842  93 KLADFFRARSRREALHMPLDDELE-IFATCDVEPA-EARRDLSKLLEQLPDRQRLPILHVKLEGLSVTETAKLTGLSESA 170
238025167  93 KLIDDFRAWSRQDALNQSFDDESE-WLAAPESEPF-EARRDLAKLLDTLPDRQRLPILHVKLEGLSVAETARMTGLSESA 170
239815647  90 KMIDLLRAKSAREALHDPLDDDLA-VFAESAIEAS-DARRDLGGLLQTLPDRQRLPIVHVKLEGLSVAETASLTGMSESA 167
291481536 126 KLLDFLRSRSRHGA-TESLDDVAD-ILCHSDDAPAhDARLDLSGLLEQLPDKQRLPILHVKLEGLSVAETARLTGLSESA 203
238028043 163 VKVGVHRGLKALAARIRGER 182
91783635  171 VKIGVHRGLKALAARIRGTR 190
71908204  171 IKVGVHRGLKALAAKIRGAL 190
71907152  171 IKVGVHRGLKALALKIRGIL 190
152981873 183 VKVAVHRGLKALAIKLQDES 202
187919831 162 VKVSIHRGLKALAAHVRRIA 181
187919842 171 VKVGVHRGLKALALKFQGTS 190
238025167 171 VKIGVHRGLKALAAKIRGTR 190
239815647 168 VKVGIHRGLKALAARLRSRA 187
291481536 204 VKVGIHRGLKALAAKARLFT 223
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