Conserved Protein Domain Family
PRK12535

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PRK12535: PRK12535 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 237130
Aligned: 10 rows
Threshold Bit Score: 289.105
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
68537090    5 ATSSQAHDAAVTDLALRAASGDRQALTEFISATHDDVWRLLAHLADTDRADDLTQETYLRVLSALPRFAARSTARTWILS 84 
161486000   1 MKSPERNDAHVTELALAAGRGDRDALTEFIRETQDDVWRLLAHLGGREIADDLTQETYLRVMSALPRFAARSSARTWLLS 80 
19551505    1 MKSKERNDAHVTELALAAGRGDRAALTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLRVMSALPRFAARSSARTWLLS 80 
38232901    3 MKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAHLGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLS 82 
62389152    1 MKSKERNDAHVTELALAAGRGDRAALTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLRVMSALPRFAARSSARTWLLS 80 
145294376   1 MKSKERNDAHVTELALAAGRGDRAALTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLRVMGALPRFAARSSARTWLLS 80 
172041564  12 HGHTAEVDAHVTDLALRAARGDKAALNEFIAATHDDVWRLLAHLANPDQADDLTQETYLRVLSALPRFAARSTARTWILS 91 
227832023   2 KRHSERDDARVTDLALKAGRGDRAALTEFIKSTQDDVWRLLAHLGGPDIADDLTQETYLRVIGALPRFAARSSARTWLLS 81 
237784814  27 VTRHDKDDARVTALALRAGQGDRAALTEFIRRTQKDVWRLLAHLADIDRADDLTQETYLRIISALPTFAGRSSARTWLLS 106
300857591   1 MKNSERDD-RVTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLRVMGALPRFAARSSARTWLLS 79 
68537090   85 LARRVWVDSVRHDMARPRSSATEIEDATSATPAAETtggqSWAEWVDTRALIDQLEEERREALILTQVLGYTYAEAAKIA 164
161486000  81 LARRVWVDNIRHDMARPRKSHVEYEDTGVTDATNST----IWSEWIDVRTLIDALPAERREALILTQVLGYTYEEAAKIA 156
19551505   81 LARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAG----IWSEWIDVRTLIDALPPERREALILTQVLGYTYEEAAKIA 156
38232901   83 LARRVWVDNIRHDMARPRKSAAEVEQCDGTTSS-------LWAEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIA 155
62389152   81 LARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAG----IWSEWIDVRTLIDALPPERREALILTQVLGYTYEEAAKIA 156
145294376  81 LARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAG----IWSEWIDVRTLIDALPPERREALILTQVLGYTYEEAAKIA 156
172041564  92 LARRVWVDSIRHDMARPRKSAAEWEDAAGDTPAAETtggsSWVEWLDTQDMLNSLEPDRREALILTQMLGYTYAEAAKIA 171
227832023  82 LARRVWVDNIRHDMARPRKSATEYEDAAALTTTPESs--gTWSEWIDARALIDALPEDRREALILTQVLGYTYEEAAKIA 159
237784814 107 VARRVWVDSVRHDMARPQSTGTEWETVADQHTATNTaassSWSDWVDVQLLMENLDPDRREALILTQVLGYTYDEAATIV 186
300857591  80 LARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGe--tTWSDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIA 157
68537090  165 NVRVGTIRSRVARARADLVEMAGEGQGGVT 194
161486000 157 GVRVGTIRSRVARARADLINATSAPEAYGT 186
19551505  157 DVRVGTIRSRVARARADLIAATATGDSSAE 186
38232901  156 DVRIGTIRSRVARARADIVAAAATETDTNE 185
62389152  157 DVRVGTIRSRVARARADLIAATATGDSSAE 186
145294376 157 DVRVGTIRSRVARARADLIAATATGDSSAE 186
172041564 172 NVRTGTIRSRVARARAELVDMQQAQQARQE 201
227832023 160 GVRVGTIRSRVARARKDLIDQRG------- 182
237784814 187 GVRVGTIRSRVARARTDLIEATSNHATKKH 216
300857591 158 NVRIGTIRSRVARARADVIAAAGRPNAASA 187
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