Conserved Protein Domain Family
PRK12526

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PRK12526: PRK12526 
RNA polymerase sigma factor; Provisional
Statistics
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PSSM-Id: 237127
Aligned: 6 rows
Threshold Bit Score: 349.099
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
218677188   1 MQVESRRTGngkehviipdnklPTESKVPTELSSWLILVGSDRDKQAFTCLFKFFAPKIKRFGISKLGGEAAANELVQDT 80 
71281355    8 RPTSAKSTS-------------MSDKINHPQLCQWLESVAISRDKQAFTHLFQFFAPKILRIARGKFPNEAQANEVVQDT 74 
162139934   8 LRCEPNTGKy-----------tAMPETPSKELMQALIDVAQSRDKKAFAYLFEYFSPKIKRFGIKQFGIEAQAMELVQET 76 
91794722    2 KNSAPNKDGsie--------anLTDLQVQTELYQWLSLVSHQRDKQAFTELFQFFAPKIKRFGMQRLGSNDKANELVQET 73 
127512405   6 SAGAPDKGSani--------ktQPETQVPAELSTWLVRVADARDKQAFTRLFQFFAPKIKRFGIKQLGNEAQAHELVQET 77 
170727125   6 YTNMQKVEGirhivevnniiskQTQEQVPTELSAWIVLVATKRDKRAFTAIFTFFAPKIKRFGIKQLNTDAMAAELVQET 85 
218677188  81 MTNVWKKAHLYNEEKGAATTWVYTVMRNAAFDMLRKVKAKAEQTIADDIWPIDDMVAesqSDQLQFGDHLMSRHVMTQIE 160
71281355   75 MSNVWRKAHLYNQDKGAATTWVYTVMRNVTFDMLRKIQGNKEDNLSDDIWPIAESMS---IENEIFDDHLEHANLLSVIE 151
162139934  77 LTSVWRKAHLYNSDKGAATTWVYTVMRNASFDMLRKMKSNKEENISEDIWPL---LNesqNTHHEYTDHLEDKQIKRYLE 153
91794722   74 MSNVWRKAHLYDGEKGAATTWVYTVMRNACFDMLRRIKTRNEQLLGDDIWPVEQALAennPESETFSDHLMEQHMREHIN 153
127512405  78 MSNVWRKAHLYDGDKGAATTWVYTVMRNAAFDMLRRVKAKAEMNLGDDIWPLEQAQVqseEEPLHFADHLMEKQMLAYVD 157
170727125  86 LSRVWNKASLFDPNKGAATTWVYSIMRNAAFDMLRKIKVKNELLLGDDIWPIE---AeeySTSEEFSDHLMDRQIADYVD 162
218677188 161 KLPLAQKTIVKGVYFQELSQEQLAQQLDVPLGTVKSRLRLALAKLKVHMGEQdHD 215
71281355  152 ELPQAQQDVVKGFYFREMSQEQLAVHLHLPLGTVKSRLRLALGKLKVQLGEK-HD 205
162139934 154 KLPVAQREVVRGVYFQDMSQEQLAQQLNIPVGTVKSRLRLALQKLRNEMGDQ-HD 207
91794722  154 KLPSSQQTVVKGVYFQSLSQEQLAQQLDVPLGTIKSRLRLALARLKLQMRDEyHD 208
127512405 158 SLPEAQRAVVKGVYYQELSQEQLAQQFGVPIGTIKSRLRLALAKLKQQMGDQqHD 212
170727125 163 QLPEAQKLVVKGVYFQELSQEQLAKQLNIPIGTVKSRLRLALAKLKEQVGES-HD 216
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